prot_E-siliculosus-1a_F_contig13507.2100.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13507.2100.1
Unique Nameprot_E-siliculosus-1a_F_contig13507.2100.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length55
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A455ULK5_9GAMM (Usp domain-containing protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455ULK5_9GAMM)

HSP 1 Score: 112 bits (279), Expect = 7.260e-31
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE+ SW KALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEEASWQKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A0F9YXE3_9ZZZZ (Usp domain-containing protein n=3 Tax=root TaxID=1 RepID=A0A0F9YXE3_9ZZZZ)

HSP 1 Score: 112 bits (281), Expect = 1.020e-30
Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE+ SWAKALPTAITLC+TFGASLHIVTVLPEFKMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEEASWAKALPTAITLCDTFGASLHIVTVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A124F5Z8_9GAMM (Universal stress protein F n=1 Tax=Halomonas sp. 54_146 TaxID=1635257 RepID=A0A124F5Z8_9GAMM)

HSP 1 Score: 112 bits (279), Expect = 2.050e-30
Identity = 52/55 (94.55%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE+ SW KALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEEASWKKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A2A3XD58_9GAMM (Universal stress protein UspA n=4 Tax=Halomonas TaxID=2745 RepID=A0A2A3XD58_9GAMM)

HSP 1 Score: 110 bits (274), Expect = 1.180e-29
Identity = 49/55 (89.09%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE+ SW KALPTAITLCETFGASLH++TVLPEFK+PMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEEASWKKALPTAITLCETFGASLHVITVLPEFKLPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: H0IYH9_9GAMM (UspF, Universal stress protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=H0IYH9_9GAMM)

HSP 1 Score: 109 bits (272), Expect = 2.370e-29
Identity = 50/55 (90.91%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE  SW KALPTAITLC+TFGASLH+VTVLPEFKMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEPASWQKALPTAITLCQTFGASLHLVTVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A3S0YP96_9GAMM (Universal stress protein n=7 Tax=Halomonas TaxID=2745 RepID=A0A3S0YP96_9GAMM)

HSP 1 Score: 108 bits (270), Expect = 4.780e-29
Identity = 48/55 (87.27%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQK+LLPVDLNE+ SW KALPTA+TLC+TFGASLHIV+VLPEFKMPMVGAYFPK
Sbjct:    1 MYQKVLLPVDLNEEASWKKALPTAVTLCQTFGASLHIVSVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A0D7V2R4_9GAMM (Nucleotide-binding universal stress protein, UspA family n=24 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D7V2R4_9GAMM)

HSP 1 Score: 108 bits (269), Expect = 6.780e-29
Identity = 48/55 (87.27%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MY K+LLPVDLNE+ SW KALPTAITLC+TFGASLH+VTVLPEFKMPMVGAYFPK
Sbjct:    1 MYHKVLLPVDLNEEASWKKALPTAITLCQTFGASLHVVTVLPEFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: UPI00201ECF3B (universal stress protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201ECF3B)

HSP 1 Score: 108 bits (269), Expect = 6.780e-29
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE  SW KALPTAITLC+TFGASLH+VTVLP+FKMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEAASWQKALPTAITLCKTFGASLHVVTVLPDFKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A1R4I5X0_9GAMM (Universal stress protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=A0A1R4I5X0_9GAMM)

HSP 1 Score: 107 bits (267), Expect = 1.360e-28
Identity = 49/55 (89.09%), Postives = 52/55 (94.55%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKILLPVDLNE+ SW KALPTA+TLC+TFGASLHIVTVLPE KMPMVGAYFPK
Sbjct:    1 MYQKILLPVDLNEEGSWKKALPTAVTLCQTFGASLHIVTVLPELKMPMVGAYFPK 55          
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Match: A0A7X4FX60_9GAMM (Universal stress protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X4FX60_9GAMM)

HSP 1 Score: 107 bits (266), Expect = 1.940e-28
Identity = 47/55 (85.45%), Postives = 53/55 (96.36%), Query Frame = 0
Query:    1 MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVGAYFPK 55
            MYQKI+LPVDLNE+ SW KALPTAITLC+TFGASLH+VTVLP+FKMP+VGAYFPK
Sbjct:    1 MYQKIMLPVDLNEEASWEKALPTAITLCQTFGASLHVVTVLPDFKMPIVGAYFPK 55          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13507.2100.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A455ULK5_9GAMM7.260e-3194.55Usp domain-containing protein n=1 Tax=Halomonas su... [more]
A0A0F9YXE3_9ZZZZ1.020e-3094.55Usp domain-containing protein n=3 Tax=root TaxID=1... [more]
A0A124F5Z8_9GAMM2.050e-3094.55Universal stress protein F n=1 Tax=Halomonas sp. 5... [more]
A0A2A3XD58_9GAMM1.180e-2989.09Universal stress protein UspA n=4 Tax=Halomonas Ta... [more]
H0IYH9_9GAMM2.370e-2990.91UspF, Universal stress protein n=2 Tax=unclassifie... [more]
A0A3S0YP96_9GAMM4.780e-2987.27Universal stress protein n=7 Tax=Halomonas TaxID=2... [more]
A0A0D7V2R4_9GAMM6.780e-2987.27Nucleotide-binding universal stress protein, UspA ... [more]
UPI00201ECF3B6.780e-2989.09universal stress protein n=1 Tax=Halomonas olivari... [more]
A0A1R4I5X0_9GAMM1.360e-2889.09Universal stress protein n=2 Tax=unclassified Halo... [more]
A0A7X4FX60_9GAMM1.940e-2885.45Universal stress protein n=2 Tax=Halomonas TaxID=2... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006016UspAPFAMPF00582Uspcoord: 1..53
e-value: 1.3E-6
score: 28.9
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620coord: 1..54
e-value: 6.9E-8
score: 35.0
NoneNo IPR availableSUPERFAMILY52402Adenine nucleotide alpha hydrolases-likecoord: 1..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13507contigE-siliculosus-1a_F_contig13507:1132..1296 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13507.2100.1mRNA_E-siliculosus-1a_F_contig13507.2100.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13507 1132..1296 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13507.2100.1 ID=prot_E-siliculosus-1a_F_contig13507.2100.1|Name=mRNA_E-siliculosus-1a_F_contig13507.2100.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=55bp
MYQKILLPVDLNEKTSWAKALPTAITLCETFGASLHIVTVLPEFKMPMVG
AYFPK
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006016UspA