prot_E-siliculosus-1a_F_contig135.2089.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig135.2089.1
Unique Nameprot_E-siliculosus-1a_F_contig135.2089.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length462
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2089.1 vs. uniprot
Match: D7G1L2_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1L2_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 1.810e-32
Identity = 76/100 (76.00%), Postives = 86/100 (86.00%), Query Frame = 0 
Query:  356 LERKVKKLEKHVPEIDNEPDDDADSGG-LLLKRRAAVTETAEGFLDRARDGAAAAADHHPVTVSDQREFEALLKEVHRDYDARLRALEVQIEKATKRKGR 454
            LERKVKKLE+HVPE+D+EPDDD D GG L L+RR AV+ETA+GFLDRARD AA AADHHPVTVS+QREFEAL  E HR+++ARLR LE QI KAT RKGR
Sbjct:  554 LERKVKKLEEHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAADHHPVTVSEQREFEALQNEKHREHEARLRELEGQISKATIRKGR 653
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2089.1 vs. uniprot
Match: D7FHA3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA3_ECTSI)

HSP 1 Score: 136 bits (342), Expect = 1.180e-30
Identity = 74/100 (74.00%), Postives = 85/100 (85.00%), Query Frame = 0 
Query:  356 LERKVKKLEKHVPEIDNEPDDDADSGG-LLLKRRAAVTETAEGFLDRARDGAAAAADHHPVTVSDQREFEALLKEVHRDYDARLRALEVQIEKATKRKGR 454
            LERKVKKLE+HVPE+D+EPDDD D GG L L+RR AV+ETA+GFLDRARD AA A DHHPVTVS+QREFEAL  E HR+++ARLR LE QI KAT R+GR
Sbjct:  749 LERKVKKLEQHVPELDSEPDDDVDFGGELALRRRVAVSETAKGFLDRARDRAARAVDHHPVTVSEQREFEALQDEKHREHEARLRELEGQIIKATIRQGR 848
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2089.1 vs. uniprot
Match: D7FH89_ECTSI (Putative Leucine Rich Repeat Protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH89_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.810e-26
Identity = 68/99 (68.69%), Postives = 79/99 (79.80%), Query Frame = 0 
Query:  358 RKVKKLEKHVPEIDNEPDDDAD-SGGLLLKRRAAVTETAEGFLDRARDGAAAAADHHPVTVSDQREFEALLKEVHRDYDARLRALEVQIEKATKR-KGR 454
            RKVKKLEKH  E+D+EPDDD D  GGL +++R AVTETA+GF DRARD A  AADHHPVTV++QREFEAL  E H  ++ARLR LE +I KATKR KGR
Sbjct: 1046 RKVKKLEKHASELDSEPDDDVDYGGGLAVRQRVAVTETAQGFFDRARDRATTAADHHPVTVAEQREFEALQNEKHCGHEARLRELEGEISKATKREKGR 1144
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2089.1 vs. uniprot
Match: A0A6H5KZF6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZF6_9PHAE)

HSP 1 Score: 89.7 bits (221), Expect = 2.990e-15
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:  380 SGGLLLKRRAAVTETAEGFLDRARDGAAAAADHHPVTVSDQREFEALLKEVHRDYDARLRALEVQIEKATKRKGRTMTLH 459
            +GG  L+RR AVTETA+GFLDRA+D AA AAD HPVTVS+QREFEAL  E HR+++ R R LE +I K  +RK    + H
Sbjct: 1083 AGGPALRRRVAVTETAQGFLDRAQDRAAGAADLHPVTVSEQREFEALQDEKHREHEERFRELEGEISKVARRKSAAASDH 1162
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig135.2089.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1L2_ECTSI1.810e-3276.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FHA3_ECTSI1.180e-3074.00Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
D7FH89_ECTSI1.810e-2668.69Putative Leucine Rich Repeat Protein n=1 Tax=Ectoc... [more]
A0A6H5KZF6_9PHAE2.990e-1560.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..451
NoneNo IPR availableCOILSCoilCoilcoord: 101..373
NoneNo IPR availableCOILSCoilCoilcoord: 3..93
NoneNo IPR availablePANTHERPTHR34491FAMILY NOT NAMEDcoord: 4..369
NoneNo IPR availablePANTHERPTHR34491:SF9coord: 4..369

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig135contigE-siliculosus-1a_F_contig135:59829..62592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig135.2089.1mRNA_E-siliculosus-1a_F_contig135.2089.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig135 59829..63417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig135.2089.1 ID=prot_E-siliculosus-1a_F_contig135.2089.1|Name=mRNA_E-siliculosus-1a_F_contig135.2089.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=462bp
PDREKQQAELDVLKSDNEQQQAELAALKSAEDKQQTELEALASANEKQQT
RIEAVESDKAKQQAELDALKSDKEKQQAEFEELQSAKKKQQAELGIFKLT
KEKQQARIEAVEFDKAKQQEELDLLKSDREKQQARIEALESDRATHQAEL
EALKSDKEKQQAELEKLKFAKEKQEARIEAVESDKKLQQAELDLLKSDRE
KQQAELEALQSEKEKEQAELEALQSDKEQQQAELEKLKFAKEKQQARFEA
VESDKAKQQEELDLLKSDREKQQARIEALETDRATQQAGLQALKSDKENQ
QAELEALQSEKEKQQGELEALQFDKEQQQAELETLASARDKQQAKLEGLT
SAKEKLERKVKKLEKHVPEIDNEPDDDADSGGLLLKRRAAVTETAEGFLD
RARDGAAAAADHHPVTVSDQREFEALLKEVHRDYDARLRALEVQIEKATK
RKGRTMTLHSR*
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