prot_E-siliculosus-1a_F_contig135.2085.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig135.2085.1
Unique Nameprot_E-siliculosus-1a_F_contig135.2085.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length64
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig135.2085.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 2.910e-20
Identity = 42/63 (66.67%), Postives = 50/63 (79.37%), Query Frame = 0
Query:    1 MGSTTFTDNAAYRSGEIYTDNGFLEDGDPVSITTFPDDTAFEGNRADNCPDVSNGDDDNCPEV 63
            MGSTTF +NAAY  G IYTD+G + +G+  S+TTFPDDT FE NRAD CPDV +GD+DNCP V
Sbjct:  319 MGSTTFRENAAYEGGAIYTDDGSVANGEAASVTTFPDDTVFEDNRADFCPDVFDGDNDNCPVV 381          
BLAST of mRNA_E-siliculosus-1a_F_contig135.2085.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 7.760e-20
Identity = 41/63 (65.08%), Postives = 49/63 (77.78%), Query Frame = 0
Query:    1 MGSTTFTDNAAYRSGEIYTDNGFLEDGDPVSITTFPDDTAFEGNRADNCPDVSNGDDDNCPEV 63
            MGSTTF +NAA+  G IYT +G  E+G+P S+TTFPDDT FE N A++CPDV NGD DNCP V
Sbjct:  319 MGSTTFRENAAFMGGAIYTSDGDEENGEPASVTTFPDDTVFEDNSAEHCPDVHNGDSDNCPVV 381          
BLAST of mRNA_E-siliculosus-1a_F_contig135.2085.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 7.270e-16
Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 0
Query:    1 MGSTTFTDNAAYRSGEIYTDNGFLEDGDPVSITTFPDDTAFEGNRADN-CPDVSNGDDDNCPEV 63
            MG TTF +N A+  G IYTD+G+     P S+TTFPDDT FE N AD  CPDV NGDD+NCP V
Sbjct:  114 MGPTTFRENGAWWGGAIYTDDGY-----PASVTTFPDDTVFEDNSADAYCPDVHNGDDNNCPVV 172          
BLAST of mRNA_E-siliculosus-1a_F_contig135.2085.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 53.5 bits (127), Expect = 9.020e-7
Identity = 29/49 (59.18%), Postives = 33/49 (67.35%), Query Frame = 0
Query:   15 GEIYTDNGFLEDGDPVSITTFPDDTAFEGNRADNCPDVSNGDDDNCPEV 63
            G IYT++    DG P S+TTFPDD      RA+ CPDV NGDDDNCP V
Sbjct:  218 GAIYTNDA---DG-PGSVTTFPDDXXXXXXRAEYCPDVHNGDDDNCPVV 262          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig135.2085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJ44_ECTSI2.910e-2066.67Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FLJ6_ECTSI7.760e-2065.08Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG1_ECTSI7.270e-1660.94Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FL58_ECTSI9.020e-759.18Asn/thr-rich large protein family protein n=1 Tax=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig135contigE-siliculosus-1a_F_contig135:22673..24343 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig135.2085.1mRNA_E-siliculosus-1a_F_contig135.2085.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig135 22129..24368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig135.2085.1 ID=prot_E-siliculosus-1a_F_contig135.2085.1|Name=mRNA_E-siliculosus-1a_F_contig135.2085.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=64bp
MGSTTFTDNAAYRSGEIYTDNGFLEDGDPVSITTFPDDTAFEGNRADNCP
DVSNGDDDNCPEV*
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