prot_E-siliculosus-1a_F_contig135.2084.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig135.2084.1
Unique Nameprot_E-siliculosus-1a_F_contig135.2084.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length165
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2084.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 272 bits (695), Expect = 2.040e-88
Identity = 144/162 (88.89%), Postives = 148/162 (91.36%), Query Frame = 0 
Query:    1 MKPASLAVIASLLAALATAVEYTVMTCADLADVDDTQVTGRTIDASTFACDEYTRFRVRNSMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATATFMGMSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKAS 162
            MK  SL +IASLLAA A AVEYTV TCADLADVDDTQVT  TIDASTFACDEYTRFRVRN+M LKATVPAVEFGNFSLKVLGELTVEPDV FNGVVDQVKNGGVLSVAEGATATFMG SEFSDNSVAVKQIGP+SCGDGCT IG GLSYIVKKGGAIHNK +
Sbjct:    1 MKTVSLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGT 162
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2084.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 1.230e-84
Identity = 138/162 (85.19%), Postives = 144/162 (88.89%), Query Frame = 0 
Query:    1 MKPASLAVIASLLAALATAVEYTVMTCADLADVDDTQVTGRTIDASTFACDEYTRFRVRNSMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATATFMGMSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKAS 162
            MKP SL +IA LLAA A AVEYTV TCADLADVDDTQVTG TID STFACDEYTRF VRNSM LKATV AVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGAT+TFMG SEFSDNSVAVKQ+G +SCGDGC   G GLSY+VKKGGAIHNK +
Sbjct:    1 MKPCSLTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGT 162
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2084.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 160 bits (405), Expect = 4.180e-48
Identity = 89/107 (83.18%), Postives = 90/107 (84.11%), Query Frame = 0 
Query:    1 MKPASLAVIASLLAALATAVEYTVMTCADLADVDDTQVTGRTIDASTFACDEYTRFRVRNSMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSV 107
            MKP SL  IASLLA  A AVEY V TCADLADVDDTQVTG TIDA+TFACDEYTRFRVRNSM LKATV AVEFGNFSLKVLGELTVEPDVTFNGVVDQ   G   SV
Sbjct:    1 MKPVSLTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTTPSV 107
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2084.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 4.150e-13
Identity = 36/47 (76.60%), Postives = 39/47 (82.98%), Query Frame = 0 
Query:  116 MGMSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYIVKKGGAIHNKAS 162
            MG SEFS+NSVAVKQ G ISCGDGCT    GL+YIVKKGGAIHNK +
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGT 47
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig135.2084.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI2.040e-8888.89Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI1.230e-8485.19Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FQG2_ECTSI4.180e-4883.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FL58_ECTSI4.150e-1376.60Asn/thr-rich large protein family protein n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..164
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.863

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig135contigE-siliculosus-1a_F_contig135:10949..12084 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig135.2084.1mRNA_E-siliculosus-1a_F_contig135.2084.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig135 10949..19314 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig135.2084.1 ID=prot_E-siliculosus-1a_F_contig135.2084.1|Name=mRNA_E-siliculosus-1a_F_contig135.2084.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=165bp
MKPASLAVIASLLAALATAVEYTVMTCADLADVDDTQVTGRTIDASTFAC
DEYTRFRVRNSMALKATVPAVEFGNFSLKVLGELTVEPDVTFNGVVDQVK
NGGVLSVAEGATATFMGMSEFSDNSVAVKQIGPISCGDGCTTIGAGLSYI
VKKGGAIHNKASPH*
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