prot_E-siliculosus-1a_F_contig135.2083.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig135.2083.1
Unique Nameprot_E-siliculosus-1a_F_contig135.2083.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length395
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig135.2083.1 vs. uniprot
Match: A0A6H5KM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE)

HSP 1 Score: 197 bits (502), Expect = 9.610e-56
Identity = 141/417 (33.81%), Postives = 210/417 (50.36%), Query Frame = 0 
Query:    1 MCTENTCSTFVWRGPGYPEHDAGGSCSCVCDDGTWSNRNILGRASCVPVVVHTVFGGAGLAFSVVVLCHAIYHLHRQQIKYHSQRTSASTSPVERCRRQLHTTTITASTLNICYFSLVL---GNIRWLSVVVLMMNG-IPNCIGGVIFTSRMWMYTLSNTHDEMEAAACRG------------WGGNDPRLMRESPEIFALSTWLERPRGHIAAGCTMSIGPSIATIFALANNTELAARFVALGGVFVSNLILVVFWVC--GRSLMRAIDSSLQLQTASSQSVWKAEGQHCGA-GHRTLVEAKKKVRRMVM---VTASLLFPAMTMGSLGAFTPYGVRAPLLMYGVPFALVPQIWLSMNVQLHSKRSHLLPGPNRNILSAWTS-----GHLATAALSRMPRSFARRQQQHVVPTQGP 390
            MC ++ C T +W G G     A G C C C D TWS  NILG  SCVP   H VFG  G+  ++  L HA Y L+RQ +KYH Q  +ASTS VE+CRR LH   I  + + +CYF +VL       W+S + +   G I   IGG++ T RMW+Y L++          R                NDPRL+RE+PE+  +S  LERP G   +   M +GP++AT+ A A + + A    A+   F+  ++   F +     +L++ ++  L+     S+   K+     G  G   L++A +K  +  +   V  SLL  ++ M  +G FT YG  APL+  G+P+   P +W   N+QLH+ RS     P+  ++S  +S       +AT  +SR  +      ++ VVPT  P
Sbjct:    1 MCGQD-CQTSLWGGTGISTVGADGGCRCACGDETWSEYNILGLPSCVPSKAHAVFGAVGVFVTMTSLGHAAYQLYRQ-VKYHRQFMAASTSSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMFGIGQIMMTIGGIL-TVRMWLYCLTSDEQRSPLQLNRFPYVSPLRNHILFLASNDPRLIRETPELLMISEALERPTGLFVSNTVMCVGPAVATVLAAAKSLQAACMVSAVA--FLGLIVFCDFIILKTATALLQTVNKYLRNSVVRSE---KSNSIMAGTVGSLQLLKAARKNIKFALYFCVVVSLLTFSIVM--IGLFTTYGATAPLIFSGIPYGCSPPVWFVFNIQLHAGRSRNRTEPD--VVSRASSVIRQVPSVATRIVSRA-KGVVFGNERSVVPTLTP 404
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig135.2083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KM92_9PHAE9.610e-5633.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 124..144
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 337..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 119..123
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 290..313
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 319..336
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 314..318
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 221..243
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 244..289
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 100..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 216..220
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 196..215
NoneNo IPR availableTMHMMTMhelixcoord: 293..315
NoneNo IPR availableTMHMMTMhelixcoord: 122..144
NoneNo IPR availableTMHMMTMhelixcoord: 220..242

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig135contigE-siliculosus-1a_F_contig135:4814..9853 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig135.2083.1mRNA_E-siliculosus-1a_F_contig135.2083.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig135 4814..9853 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig135.2083.1 ID=prot_E-siliculosus-1a_F_contig135.2083.1|Name=mRNA_E-siliculosus-1a_F_contig135.2083.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=395bp
MCTENTCSTFVWRGPGYPEHDAGGSCSCVCDDGTWSNRNILGRASCVPVV
VHTVFGGAGLAFSVVVLCHAIYHLHRQQIKYHSQRTSASTSPVERCRRQL
HTTTITASTLNICYFSLVLGNIRWLSVVVLMMNGIPNCIGGVIFTSRMWM
YTLSNTHDEMEAAACRGWGGNDPRLMRESPEIFALSTWLERPRGHIAAGC
TMSIGPSIATIFALANNTELAARFVALGGVFVSNLILVVFWVCGRSLMRA
IDSSLQLQTASSQSVWKAEGQHCGAGHRTLVEAKKKVRRMVMVTASLLFP
AMTMGSLGAFTPYGVRAPLLMYGVPFALVPQIWLSMNVQLHSKRSHLLPG
PNRNILSAWTSGHLATAALSRMPRSFARRQQQHVVPTQGPLSLP*
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