prot_E-siliculosus-1a_F_contig13481.2077.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13481.2077.1
Unique Nameprot_E-siliculosus-1a_F_contig13481.2077.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length91
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A6H5LNR6_9PHAE (UBX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNR6_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 2.210e-42
Identity = 77/80 (96.25%), Postives = 80/80 (100.00%), Query Frame = 0
Query:    7 QVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGK 86
            +VQFPDRVVLQ+TFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTG+
Sbjct:  298 KVQFPDRVVLQSTFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGE 377          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A7S2V2I9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2I9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 2.260e-19
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTG 85
            F+  + +VQFPDRVV+QA F   E V  ++D+V+ +L  D A RPF LYVSPP+  L A   L+  GLVPAALVY+SW   PP G
Sbjct:  278 FAFTVIRVQFPDRVVIQAHFHPRESVGTVIDLVRQNLSPDHANRPFHLYVSPPKTKLAAEDLLTAQGLVPAALVYLSWESTPPEG 362          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: D7FT67_ECTSI (PUB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT67_ECTSI)

HSP 1 Score: 82.0 bits (201), Expect = 1.580e-16
Identity = 40/41 (97.56%), Postives = 41/41 (100.00%), Query Frame = 0
Query:   46 FELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGK 86
            FELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTG+
Sbjct:  222 FELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGE 262          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A3M6VAR4_9STRA (UBX domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VAR4_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 5.660e-16
Identity = 40/87 (45.98%), Postives = 56/87 (64.37%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGKM 87
            F   + +VQFPDR V+QA+F   E ++D++D V   L+D   A  F LYV+PP   L A+ +L +  LVPAAL Y+SW EVPP  ++
Sbjct:  457 FQTVLIRVQFPDRAVMQASFHPNETIQDVMDHVTKCLDDQYKASKFYLYVTPPTQRLAASKTLVELNLVPAALTYLSWLEVPPQAEV 543          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: D7FME0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FME0_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 6.200e-16
Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
Query:    7 QVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARP 45
            +VQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARP
Sbjct:   57 KVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARP 95          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: G4YTH0_PHYSP (UBX domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YTH0_PHYSP)

HSP 1 Score: 79.3 bits (194), Expect = 2.660e-15
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGKM 87
            F   + +VQFPDR V+QA+F   E ++D++D V   L +      F LYV+PP   L  A +L+D  LVPAAL Y+SW E+PP  ++
Sbjct:  438 FQTALIRVQFPDRAVMQASFHPNETIQDVMDHVTECLAEQFKGGKFYLYVTPPTQKLAPAKTLADLNLVPAALTYLSWSEMPPQAEV 524          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A3F2S2E0_9STRA (UBX domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S2E0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 6.550e-15
Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGKMKTS 90
            F   + +VQFPDR V+QATF   E ++D++D V   L+       F LYV+PP   L    +L++  LVPAAL Y+SW EVPP  +  T+
Sbjct:  324 FQTALIRVQFPDRAVVQATFHPNETIRDVMDHVAECLDSLYKGNKFYLYVTPPTQKLAEGKTLAELNLVPAALTYLSWLEVPPQIETNTA 413          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A6A4ACN2_9STRA (UBX domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A4ACN2_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 9.350e-15
Identity = 38/87 (43.68%), Postives = 54/87 (62.07%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGKM 87
            F   + +VQFPDR V+QA+F   E ++D++D V   L +      F LYV+PP   L  A++L++  LVPAAL Y+SW E+PP   M
Sbjct:  468 FQTALIRVQFPDRAVMQASFHPNETIQDVMDHVTECLGEQYKGGKFYLYVTPPTQKLVPANTLAELNLVPAALTYLSWLELPPQADM 554          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: H3GCB5_PHYRM (UBX domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GCB5_PHYRM)

HSP 1 Score: 77.4 bits (189), Expect = 1.270e-14
Identity = 37/83 (44.58%), Postives = 52/83 (62.65%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVPP 83
            F   + +VQFPDR V+QA+F   E ++D+++ V   L D      F LYV+PP   L A  +L++  L+PAAL Y+SW EVPP
Sbjct:  405 FQTALIRVQFPDRAVMQASFHPNETIQDVMNHVTECLGDQYKGNKFYLYVTPPTQKLAATKTLAELNLIPAALSYLSWLEVPP 487          
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Match: A0A0P1AS46_PLAHL (Predicted ubiquitin regulatory protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AS46_PLAHL)

HSP 1 Score: 75.1 bits (183), Expect = 8.280e-14
Identity = 37/82 (45.12%), Postives = 53/82 (64.63%), Query Frame = 0
Query:    1 FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYVSPPRVVLKAASSLSDAGLVPAALVYVSWREVP 82
            F   + +VQF D  VLQA+F  +E +KD+++ V   L +  +A  F LYVSPP   L  + +L++  LVPAAL+Y+SW EVP
Sbjct:  468 FQSALIRVQFSDGAVLQASFQPSETIKDVMEHVTECLAEQYSASKFYLYVSPPTQKLNNSKTLTELNLVPAALIYLSWLEVP 549          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13481.2077.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LNR6_9PHAE2.210e-4296.25UBX domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S2V2I9_9STRA2.260e-1952.94Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FT67_ECTSI1.580e-1697.56PUB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A3M6VAR4_9STRA5.660e-1645.98UBX domain-containing protein n=1 Tax=Peronospora ... [more]
D7FME0_ECTSI6.200e-1697.44Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G4YTH0_PHYSP2.660e-1543.68UBX domain-containing protein n=1 Tax=Phytophthora... [more]
A0A3F2S2E0_9STRA6.550e-1543.33UBX domain-containing protein n=3 Tax=Phytophthora... [more]
A0A6A4ACN2_9STRA9.350e-1543.68UBX domain-containing protein n=4 Tax=Phytophthora... [more]
H3GCB5_PHYRM1.270e-1444.58UBX domain-containing protein n=1 Tax=Phytophthora... [more]
A0A0P1AS46_PLAHL8.280e-1445.12Predicted ubiquitin regulatory protein n=1 Tax=Pla... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001012UBX domainPFAMPF00789UBXcoord: 7..76
e-value: 1.3E-9
score: 38.1
IPR001012UBX domainPROSITEPS50033UBXcoord: 7..76
score: 11.917
NoneNo IPR availableGENE3D3.10.20.90coord: 5..77
e-value: 5.6E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR46467FAMILY NOT NAMEDcoord: 8..79
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 7..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13481contigE-siliculosus-1a_F_contig13481:433..1204 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13481.2077.1mRNA_E-siliculosus-1a_F_contig13481.2077.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13481 433..1204 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13481.2077.1 ID=prot_E-siliculosus-1a_F_contig13481.2077.1|Name=mRNA_E-siliculosus-1a_F_contig13481.2077.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=91bp
FSCGIPQVQFPDRVVLQATFASTEGVKDLLDVVKSSLEDDVAARPFELYV
SPPRVVLKAASSLSDAGLVPAALVYVSWREVPPTGKMKTS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR001012UBX_dom