prot_E-siliculosus-1a_F_contig13426.2053.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig13426.2053.1
Unique Nameprot_E-siliculosus-1a_F_contig13426.2053.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length65
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: D8LSH5_ECTSI (Ornithine aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSH5_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 5.730e-28
Identity = 59/65 (90.77%), Postives = 59/65 (90.77%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYG      GNPMACRVATAALEVLREEGMAENA
Sbjct:  295 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYG------GNPMACRVATAALEVLREEGMAENA 353          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: UPI001891D907 (ornithine aminotransferase, mitochondrial-like n=1 Tax=Pygocentrus nattereri TaxID=42514 RepID=UPI001891D907)

HSP 1 Score: 99.0 bits (245), Expect = 1.860e-24
Identity = 48/65 (73.85%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGG+YPVSAVL DD++MLT+KPG+HGSTYG      GNP+ACRVA AALEVL EE +AENA
Sbjct:   49 GKALSGGIYPVSAVLCDDDVMLTIKPGEHGSTYG------GNPLACRVAIAALEVLEEENLAENA 107          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: A0A6G1S7C6_9ACAR (Ornithine aminotransferase, mitochondrial (Fragment) n=1 Tax=Aceria tosichella TaxID=561515 RepID=A0A6G1S7C6_9ACAR)

HSP 1 Score: 97.1 bits (240), Expect = 3.490e-24
Identity = 50/65 (76.92%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGGVYPVSAVLADDE+ML VKPGQHGSTYG      GNP+ACRVATAAL VL +E + ENA
Sbjct:    3 GKALSGGVYPVSAVLADDEVMLCVKPGQHGSTYG------GNPVACRVATAALRVLLDEKLTENA 61          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: UPI0019A267B4 (Ornithine--oxo-acid transaminase n=1 Tax=Ferruginibacter sp. TaxID=1940288 RepID=UPI0019A267B4)

HSP 1 Score: 101 bits (251), Expect = 8.110e-24
Identity = 51/65 (78.46%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGGVYPVSAVLA DEIMLT+KPG+HGSTYG      GNP+AC VATAALEV+R+EG+AENA
Sbjct:  264 GKALSGGVYPVSAVLARDEIMLTIKPGEHGSTYG------GNPLACAVATAALEVVRDEGLAENA 322          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: A0A7F8Q5L8_LEPWE (ornithine aminotransferase, mitochondrial-like n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A7F8Q5L8_LEPWE)

HSP 1 Score: 97.8 bits (242), Expect = 1.220e-23
Identity = 48/65 (73.85%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGG+YPVSAVL DDE+MLT+KPG+HGSTYG      GNP+ CRVA AALEVL EE +AENA
Sbjct:   51 GKALSGGLYPVSAVLCDDEVMLTIKPGEHGSTYG------GNPLGCRVAIAALEVLEEENLAENA 109          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: UPI001955A745 (ornithine aminotransferase, mitochondrial n=1 Tax=Pimephales promelas TaxID=90988 RepID=UPI001955A745)

HSP 1 Score: 100 bits (249), Expect = 1.850e-23
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGGVYPVSAVL DDE+MLT+KPG+HGSTYG      GNP+ACRVA AALEVL +EG+A+NA
Sbjct:  288 GKALSGGVYPVSAVLCDDEVMLTIKPGEHGSTYG------GNPLACRVAIAALEVLEDEGLADNA 346          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: UPI001401E037 (ornithine aminotransferase, mitochondrial isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001401E037)

HSP 1 Score: 100 bits (249), Expect = 1.910e-23
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGG+YPVSAVL DDE+MLT++PG+HGSTYG      GNP+ACRVA AALEVL EEG+AENA
Sbjct:  292 GKALSGGLYPVSAVLCDDEVMLTIRPGEHGSTYG------GNPLACRVAMAALEVLEEEGLAENA 350          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: A0A6J2VBF7_CHACN (Ornithine aminotransferase n=1 Tax=Chanos chanos TaxID=29144 RepID=A0A6J2VBF7_CHACN)

HSP 1 Score: 100 bits (249), Expect = 1.930e-23
Identity = 51/65 (78.46%), Postives = 55/65 (84.62%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGGVYPVSAVL DDEIMLT+KPG+HGSTYG      GNP+ACRVA AALEVL EE +AENA
Sbjct:  294 GKALSGGVYPVSAVLCDDEIMLTIKPGEHGSTYG------GNPLACRVAVAALEVLEEEKLAENA 352          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: K4HB80_9SAUR (Ornithine aminotransferase (Fragment) n=7 Tax=Sauria TaxID=32561 RepID=K4HB80_9SAUR)

HSP 1 Score: 94.4 bits (233), Expect = 1.950e-23
Identity = 46/65 (70.77%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGG+YPVSAVL DDEI LT+KPG+HGSTYG      GNP+ACRVA +ALEV+ EE ++ENA
Sbjct:    5 GKALSGGLYPVSAVLCDDEIXLTIKPGEHGSTYG------GNPLACRVAMSALEVIEEESLSENA 63          
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Match: A0A5B9WUE6_9BACT (Ornithine aminotransferase n=1 Tax=Chitinophaga sp. XS-30 TaxID=2604421 RepID=A0A5B9WUE6_9BACT)

HSP 1 Score: 99.8 bits (247), Expect = 2.900e-23
Identity = 49/65 (75.38%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    1 GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVATAALEVLREEGMAENA 65
            GKALSGG+ PVSAVLADDE+MLT++PG+HGSTYG      GNP+AC+VA AALEVLR+EGMAENA
Sbjct:  257 GKALSGGMLPVSAVLADDEVMLTIRPGEHGSTYG------GNPLACKVAMAALEVLRDEGMAENA 315          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig13426.2053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSH5_ECTSI5.730e-2890.77Ornithine aminotransferase n=2 Tax=Ectocarpus TaxI... [more]
UPI001891D9071.860e-2473.85ornithine aminotransferase, mitochondrial-like n=1... [more]
A0A6G1S7C6_9ACAR3.490e-2476.92Ornithine aminotransferase, mitochondrial (Fragmen... [more]
UPI0019A267B48.110e-2478.46Ornithine--oxo-acid transaminase n=1 Tax=Ferrugini... [more]
A0A7F8Q5L8_LEPWE1.220e-2373.85ornithine aminotransferase, mitochondrial-like n=1... [more]
UPI001955A7451.850e-2375.38ornithine aminotransferase, mitochondrial n=1 Tax=... [more]
UPI001401E0371.910e-2375.38ornithine aminotransferase, mitochondrial isoform ... [more]
A0A6J2VBF7_CHACN1.930e-2378.46Ornithine aminotransferase n=1 Tax=Chanos chanos T... [more]
K4HB80_9SAUR1.950e-2370.77Ornithine aminotransferase (Fragment) n=7 Tax=Saur... [more]
A0A5B9WUE6_9BACT2.900e-2375.38Ornithine aminotransferase n=1 Tax=Chitinophaga sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005814Aminotransferase class-IIIPFAMPF00202Aminotran_3coord: 1..65
e-value: 4.0E-14
score: 52.1
IPR015421Pyridoxal phosphate-dependent transferase, major domainGENE3D3.40.640.10coord: 1..61
e-value: 1.0E-16
score: 62.5
NoneNo IPR availablePANTHERPTHR11986AMINOTRANSFERASE CLASS IIIcoord: 1..65
IPR034758Ornithine aminotransferase, mitochondrialPANTHERPTHR11986:SF18ORNITHINE AMINOTRANSFERASE, MITOCHONDRIALcoord: 1..65
IPR015424Pyridoxal phosphate-dependent transferaseSUPERFAMILY53383PLP-dependent transferasescoord: 1..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig13426contigE-siliculosus-1a_F_contig13426:188..752 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig13426.2053.1mRNA_E-siliculosus-1a_F_contig13426.2053.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig13426 188..752 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13426.2053.1 ID=prot_E-siliculosus-1a_F_contig13426.2053.1|Name=mRNA_E-siliculosus-1a_F_contig13426.2053.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=65bp
GKALSGGVYPVSAVLADDEIMLTVKPGQHGSTYGKLAPVSGNPMACRVAT
AALEVLREEGMAENA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015424PyrdxlP-dep_Trfase
IPR034758Orn_aminotrans_mito
IPR015421PyrdxlP-dep_Trfase_major
IPR005814Aminotrans_3