prot_E-siliculosus-1a_F_contig1332.2012.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1332.2012.1
Unique Nameprot_E-siliculosus-1a_F_contig1332.2012.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length992
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2012.1 vs. uniprot
Match: A0A6H5KVW8_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVW8_9PHAE)

HSP 1 Score: 1285 bits (3325), Expect = 0.000e+0
Identity = 823/992 (82.96%), Postives = 842/992 (84.88%), Query Frame = 0
Query:    1 MAGNKARQSEAPGEGGDDGSNNDCTNTTYAPVPRMKKRPRGEGGGVXXXXXXXXXXXXXEPKDSLSDEGDQAASSNSSAGACGEGRTCVSCRKSKXXXXXXXXXXXXXXXXXVCIAQVRGRGRPVASMTAGKKSLKLDEDEVGRSSKNGGGADDTSGSARVAKSVGAEAEPGSSHANXXXXXXXXXXXXXXXXGASPSSGVLSSAHSSLAGGXXXXIDGATTGGSGSMGTRKGRPSSSVEVPPLAAVASQIAAGTSPSPLYAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLEHQRHFEAFSRALPPRIMQSGIPTIAPPQQXXXXXXXXQ-GVNGTLHNSSARPLSTHSLQFHGGGVGXXXXXXXXLSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGPGPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNAPSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRGKGISSLSSDGGFNGAGKVEASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDGEIFLSKSEDKQQRWLIAVEQGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFRDHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDLCGRLFLTTQEANEMYASDNQDVWATCIHPDDHKTFFDNLSMQLFRTPGHQSEFKKVLKCRDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKVDQPLTASDGHGSSGGSTAASPPVQPQPEGPSSSRPSLPPPPRFVGSGNSGDRGAGGVGAAAAVTTALRGVSSASCSVPSSSGVVTAVAASVAGEGDCGLSRQPLPPLDLEVMQRRPGSLGGHGNGDGDSADVSPGGVGAAMATGGGGF 991
            MA N ARQ+EAP EGGDDGSNND TNT+YAPVPRMKKRPRGEG   XXXXXXXXXXXXX                 SSAGACGEGRTCVSCRKSK  XXXXXXXXXXXXXX VCIAQVRGRGRPVAS+TAGKKSLKL ED VGRSSKNGGGADDTS SARVAKS+ AEAEPGSSHAN                GASPSSGVLS AH SLAGG    IDGAT G SGSM TRK R SSSVEVPPLAAVASQI+AGTSPSPLYAAA+DGEGSPRGDHGGDGG GVGEGFLLA  E QRHFEA SRALPPRIMQSG PTIAPPQQ XXXXXXX  GV G LHNSSARPLS H          XXXXXXXXLSDGGSM AMNASA+ GSISSAGGSWRG F+GGPG AAHAVGGLGG GE+SRNDID PNGQWEYMN   VAT                                  XXXXXXXXXXXXXXXX XXXXXXXXXXXX    RGKGISSLSSDGGFNGAGK  ASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDG IFLSKSEDKQQRWLIAVE+GAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFR+H +HRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHND+CGRLFLTT EANEMYA DNQDVWATCIHPDDHK FFDNLSMQLFRTPGHQSEFKKVLKCRDR GVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKV+Q LTASDGHGSSGGSTAASP VQPQPE PSSSRPSLPPPPRFVGSGNSGDR AGG+GAAAA TTALRGVSSASCSVPS SGV+TAVAASVAGEGDC LSRQPLPPLDLEVMQRRPGSLGG+G+G G+SADVSPG     MA GGGGF
Sbjct:    1 MAENSARQNEAPVEGGDDGSNNDDTNTSYAPVPRMKKRPRGEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSAGACGEGRTCVSCRKSKVKXXXXXXXXXXXXXXLVCIAQVRGRGRPVASVTAGKKSLKLVEDGVGRSSKNGGGADDTSRSARVAKSMAAEAEPGSSHANGSGSSSRESS------GASPSSGVLSCAHPSLAGGGGG-IDGATAGSSGSMSTRKVRLSSSVEVPPLAAVASQISAGTSPSPLYAAAVDGEGSPRGDHGGDGGVGVGEGFLLAHHE-QRHFEACSRALPPRIMQSGTPTIAPPQQHXXXXXXXXXGVYGALHNSSARPLSAHXXXXXXXXXXXXXXXXXXLSDGGSMTAMNASASPGSISSAGGSWRGEFIGGPGAAAHAVGGLGGMGEISRNDIDVPNGQWEYMNGTEVATTTAKLEGEVNAPTSSSSPAESFAPMPMGHMANSGXXXXXXXXXXXXXXXXEXXXXXXXXXXXX----RGKGISSLSSDGGFNGAGKAPASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDGRIFLSKSEDKQQRWLIAVERGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFREHGIHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTHEANEMYACDNQDVWATCIHPDDHKAFFDNLSMQLFRTPGHQSEFKKVLKCRDRTGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKVEQTLTASDGHGSSGGSTAASPSVQPQPEMPSSSRPSLPPPPRFVGSGNSGDRRAGGMGAAAAATTALRGVSSASCSVPSFSGVMTAVAASVAGEGDCVLSRQPLPPLDLEVMQRRPGSLGGYGSGGGESADVSPG-----MAAGGGGF 975          
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2012.1 vs. uniprot
Match: D7FVP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVP7_ECTSI)

HSP 1 Score: 1197 bits (3098), Expect = 0.000e+0
Identity = 821/1040 (78.94%), Postives = 839/1040 (80.67%), Query Frame = 0
Query:    1 MAGNKARQSEAPGEGGDDGSNNDCTNTTYAPVPRMKKRPRGEGGGVXXXXXXXXXXXXXEPKDSLSDEGDQAASSNSSAGACGEGRTCVSCRKSKXXXXXXXXXXXXXXXXXVCIAQVRGRGRPVASMTAGKKSLKLDEDEVGRSSKNGGGADDTSGSARVAKSVGAEAEPGSSHANXXXXXXXXXXXXXXXXGASPSSGVLSSAHSSLAGGXXXXIDGATTGGSGSMGTRKGRPSSSVEVPPLAAVASQIAAGTSPSPLYAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLEHQRHFEAFSRALPPRIMQSGIPTIAPPQQXXXXXXXXQGVNGTLHNSSARPLSTHSLQFHGGGVGXXXXXXXXLSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGPGPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNAPSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RRGKGISSLSSDGGFNGAGKVEASTWVEAMDEHTHAVXXXXXXXXXXXXPTAGERGAXXXXXXXXPDGEIFLSKSEDKQQRWLIAVEQGAEATGRDSGGRSPGANGGSVDPTEAIVSGFWKLFRDHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDLCGRLFLTTQEANEMYASDNQDVWATCIHPDDHKTFFDNL----------------SMQLFRTPG--HQSEFKKVL-------------------------------------KCRDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKVDQPLTASDGHGSSGGSTAASPPVQPQPEGPSSSRPSLPPPPRFVGSGNSGDRGAGGVGAAAA---VTTALRGVSSASCSVPSSSGVVTAVAASVAGEGDCGLSRQPLPPLDLEVMQRRPGSLGGHGNGDGDSADVSPGGV 980
            MAGNKAR +EAP EGGDD SN+D   T YAPVPRMKKRPRG+GGGV             EPKDSLSDEGDQAASSNSSAGACGEGRTCVSCRKSK                 VCIAQVRGRGRPVASMTAGKKSLKLDED VGRSSKNGGGADDTS SARVAKSVGAE EPG     XXXXXXXXXXXXXXXX       VLSSAH SLAGG    IDG+TTG SGSMGTR G+PSSSVEVPPLAAVASQIAAGTSPSPLYAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLE QRH EA SRAL PRIMQSGIPTIAPPQQ XXXXX  QGV G LHNSSARPLSTH LQFHGGG  XXXXXXXX SDGGSMAAMNASAAQGSISSAGGSWRGAFLGGPGPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMN PSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RRGK ISSLSSDGGFNGAGKV ASTWVEAMDEHTHAV   XXXXXXXXXPTAG    XXXXXXXXPDG                                       SVDPTEAIVSGFWKLFR+HEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHND+CGRLFLTTQEANEMYASDNQDVWATCIHPDDH+     L                S+++ ++    H    + +L                                     +CRDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQ V+QPLTASDGHGSSGGSTAASPPVQPQPEGPSSSRPSLPPPPRFVGSGNSGDRGAGGV        VTTALRGVSSASCSVPSSSGVVTAVAASVAGEGDCGLSRQPLPPLDLEVMQRRPGSLGGHG+G GDSADVSPGGV
Sbjct:    1 MAGNKARHNEAPCEGGDDRSNDD--GTMYAPVPRMKKRPRGQGGGVKEEDDMNYSSPPPEPKDSLSDEGDQAASSNSSAGACGEGRTCVSCRKSKL----------------VCIAQVRGRGRPVASMTAGKKSLKLDEDRVGRSSKNGGGADDTSRSARVAKSVGAEEEPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLSSAHPSLAGGGGGGIDGSTTGSSGSMGTRTGQPSSSVEVPPLAAVASQIAAGTSPSPLYAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLE-QRHLEACSRALSPRIMQSGIPTIAPPQQHXXXXX--QGVYGALHNSSARPLSTHPLQFHGGGXXXXXXXXXXXSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGPGPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNTPSVATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRRGKCISSLSSDGGFNGAGKVAASTWVEAMDEHTHAVAAGXXXXXXXXXPTAGXX--XXXXXXXXPDG---------------------------------------SVDPTEAIVSGFWKLFREHEVHRPKAVLVIRHWALCALDRRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPVPPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDVCGRLFLTTQEANEMYASDNQDVWATCIHPDDHQDLLRQLIDAALPYSWAPVRVQESVEVMQSAAVSHSERIRPLLVYPPYPAASAALRERTNALGVSTILFIVFLLRLPDHLQCRDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQNVEQPLTASDGHGSSGGSTAASPPVQPQPEGPSSSRPSLPPPPRFVGSGNSGDRGAGGVXXXXXXXXVTTALRGVSSASCSVPSSSGVVTAVAASVAGEGDCGLSRQPLPPLDLEVMQRRPGSLGGHGSGGGDSADVSPGGV 978          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1332.2012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KVW8_9PHAE0.000e+082.96Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FVP7_ECTSI0.000e+078.94Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 88..115
e-value: 9.0E-5
score: 22.5
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 87..114
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 87..116
score: 9.446
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 84..140
e-value: 7.6E-6
score: 27.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 86..122
NoneNo IPR availablePANTHERPTHR31535FAMILY NOT NAMEDcoord: 542..990
NoneNo IPR availablePANTHERPTHR31535:SF3coord: 542..990

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1332contigE-siliculosus-1a_F_contig1332:24873..31257 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1332.2012.1mRNA_E-siliculosus-1a_F_contig1332.2012.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1332 24873..31257 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1332.2012.1 ID=prot_E-siliculosus-1a_F_contig1332.2012.1|Name=mRNA_E-siliculosus-1a_F_contig1332.2012.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=992bp
MAGNKARQSEAPGEGGDDGSNNDCTNTTYAPVPRMKKRPRGEGGGVKEED
DMNDSSPPPEPKDSLSDEGDQAASSNSSAGACGEGRTCVSCRKSKVKCSR
VLPCDRCRRLKLVCIAQVRGRGRPVASMTAGKKSLKLDEDEVGRSSKNGG
GADDTSGSARVAKSVGAEAEPGSSHANGSGNSSRSGSRGRGSSGASPSSG
VLSSAHSSLAGGGGGGIDGATTGGSGSMGTRKGRPSSSVEVPPLAAVASQ
IAAGTSPSPLYAAALDGEGSPRGDHGGDGGGGVGEGFLLAPLEHQRHFEA
FSRALPPRIMQSGIPTIAPPQQHQQQQQQQQGVNGTLHNSSARPLSTHSL
QFHGGGVGGGGSGSSGLSDGGSMAAMNASAAQGSISSAGGSWRGAFLGGP
GPAAHAVGGLGGTGEVSRNDIDTPNGQWEYMNAPSVATATATVEGEVNAP
ASSSSAAESFAPMPMGHMANSGNGGGGGVGGAGDGRGENGRGGGCGGGSG
GMGMRRGKGISSLSSDGGFNGAGKVEASTWVEAMDEHTHAVAAGAGANAG
AGAPTAGERGAAGGGGGGGPDGEIFLSKSEDKQQRWLIAVEQGAEATGRD
SGGRSPGANGGSVDPTEAIVSGFWKLFRDHEVHRPKAVLVIRHWALCALD
RRSTHLMRETVSMARALSINVAEILNDYSIYAMFHELLREAEAGNTIEPV
PPAELGHQETPQYIQEMSSVFAAVSMRVVLRGQSSFHHNDLCGRLFLTTQ
EANEMYASDNQDVWATCIHPDDHKTFFDNLSMQLFRTPGHQSEFKKVLKC
RDRIGVVFLALVHFRYEFRDDGNFAAFGLSILPLPQSDYIQKVDQPLTAS
DGHGSSGGSTAASPPVQPQPEGPSSSRPSLPPPPRFVGSGNSGDRGAGGV
GAAAAVTTALRGVSSASCSVPSSSGVVTAVAASVAGEGDCGLSRQPLPPL
DLEVMQRRPGSLGGHGNGDGDSADVSPGGVGAAMATGGGGFS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd