prot_E-siliculosus-1a_F_contig1331.2004.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1331.2004.1
Unique Nameprot_E-siliculosus-1a_F_contig1331.2004.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length118
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.400e-64
Identity = 115/117 (98.29%), Postives = 115/117 (98.29%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 117
            MVAFDKSGLRVVFSPSKPD SDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPP SDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF
Sbjct:  772 MVAFDKSGLRVVFSPSKPDASDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPHSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 888          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A8K0GM44_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GM44_9ROSA)

HSP 1 Score: 85.9 bits (211), Expect = 3.860e-17
Identity = 45/116 (38.79%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAG 116
            +VAF+ S L++ F+ SKP P +P  + +   FTN S    S  VFQAAVPK   + +   S + LP   +GVV+Q + VTN+  G KS++M+++I ++    +V E  Q+  FP G
Sbjct:  766 IVAFESSALKMEFNFSKP-PGNPQTTLIQATFTNLSSNNYSDFVFQAAVPKFLQLHLDPASSNTLPASGNGVVTQNLKVTNSQHGKKSIVMRVRIAYKMNNKDVLEEGQINNFPRG 880          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D9A8B5_SALSN (AP-1 complex subunit gamma n=7 Tax=Salvia TaxID=21880 RepID=A0A4D9A8B5_SALSN)

HSP 1 Score: 82.4 bits (202), Expect = 6.340e-16
Identity = 45/116 (38.79%), Postives = 67/116 (57.76%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAG 116
            +VAF+ S L+V F+ SK DPS    + +   FTN S    S  VFQAAVPK   + +   S + LP   DG ++Q + V+N+  G KSL+M+++I ++    +V E  Q+  FP G
Sbjct:  809 IVAFESSSLKVTFNFSK-DPSSQHTTLIEAQFTNKSPNIYSNFVFQAAVPKFLQLHLDPASSNTLPASGDGSITQTLRVSNSQHGKKSLIMRMRINYKANNKDVLEEGQINNFPRG 923          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A7S2S4J2_9STRA (AP-1 complex subunit gamma n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S4J2_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 1.170e-15
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 0
Query:   28 VSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAG 116
            V+  ++NT   EIS  VFQAAVPK  ++KM   SG  LPP   G V Q IN+ N+MQG+K ++MK+KI +     NV + A V+ FP G
Sbjct:  763 VTAVYSNTGGVEISNFVFQAAVPKFISLKMEPPSGDTLPPFGTGQVQQRINLVNSMQGSKDIIMKVKIAYTANGENVVQQATVSGFPQG 851          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: UPI001036A32C (AP-1 complex subunit gamma-2-like isoform X1 n=9 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036A32C)

HSP 1 Score: 81.6 bits (200), Expect = 1.180e-15
Identity = 39/115 (33.91%), Postives = 71/115 (61.74%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 115
            +VAF+ + L+++F+ SKP P +P  + +   F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V+E  Q+  FP+
Sbjct:  782 IVAFESNSLKIMFNISKP-PGNPQTTLIEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKTNNKDVSEEGQIKNFPS 895          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4S4EZU1_CAMSI (GAE domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EZU1_CAMSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.190e-15
Identity = 39/115 (33.91%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 115
            +VAF+ + L+++F+ SKP P +P  + +   F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V E  Q+  FP+
Sbjct:  233 IVAFESNSLKIMFNISKP-PGNPQTTLIEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKMNNKDVLEEGQIKNFPS 346          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A7J7GGL1_CAMSI (GAE domain-containing protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GGL1_CAMSI)

HSP 1 Score: 80.5 bits (197), Expect = 2.810e-15
Identity = 39/115 (33.91%), Postives = 70/115 (60.87%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 115
            +VAF+ + L+++F+ SKP P +P  +     F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V+E  Q+  FP+
Sbjct:  415 IVAFESNSLKIMFNISKP-PGNPQTTLTEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKTNNKDVSEEGQIKNFPS 528          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D8YEI8_SALSN (AP-1 complex subunit gamma n=10 Tax=Salvia TaxID=21880 RepID=A0A4D8YEI8_SALSN)

HSP 1 Score: 79.7 bits (195), Expect = 5.600e-15
Identity = 42/116 (36.21%), Postives = 69/116 (59.48%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAG 116
            +VAF+   L+V F+ SK +P +P  + +   F N S +  S  VFQAAVPK   + +   SG  LP   +G ++Q++ V+N+  G KSL+M+++I ++    +V E  Q++ FP G
Sbjct:  842 VVAFESGSLKVTFNFSK-EPGNPQTTTIEAQFVNKSPDIYSSFVFQAAVPKFLQLHLEPASGSTLPASGNGSITQKLKVSNSQHGKKSLVMRVRINYKAKDKDVLEDGQISNFPHG 956          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D9BPW3_SALSN (AP-1 complex subunit gamma n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BPW3_SALSN)

HSP 1 Score: 79.3 bits (194), Expect = 7.600e-15
Identity = 42/116 (36.21%), Postives = 68/116 (58.62%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAG 116
            +VAF+   L+V F+ SK +P +P  + +   F N S +  S  VFQAAVPK   + +   SG  LP   +G + Q++ V+N+  G KSL+M+++I ++    +V E  Q++ FP G
Sbjct:  787 VVAFESGSLKVTFNFSK-EPGNPQTTTIEAQFVNKSPDIYSNFVFQAAVPKFLQLHLEPASGSTLPASGNGSIMQKLKVSNSQHGKKSLVMRVRINYKANGKDVLEDGQISNFPHG 901          
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A022Q1N9_ERYGU (AP-1 complex subunit gamma n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q1N9_ERYGU)

HSP 1 Score: 79.0 bits (193), Expect = 1.030e-14
Identity = 42/114 (36.84%), Postives = 67/114 (58.77%), Query Frame = 0
Query:    1 MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFP 114
            ++AF+ S L+V F+ SK +P  P  + +   FTN S    S  VFQAAVPK   + +   S + LP  S+  ++Q++ V+N+  G KSL+M+L+I ++    +V E  Q+  FP
Sbjct:  760 IIAFESSSLKVTFNFSK-EPGSPQTTLIEARFTNKSPNAYSNFVFQAAVPKFLQLHLDPASSNTLPANSNDSITQKLRVSNSQHGKKSLVMRLRINYKVNDKDVLEEGQINNFP 872          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI1.400e-6498.29AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A8K0GM44_9ROSA3.860e-1738.79Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A4D9A8B5_SALSN6.340e-1638.79AP-1 complex subunit gamma n=7 Tax=Salvia TaxID=21... [more]
A0A7S2S4J2_9STRA1.170e-1547.19AP-1 complex subunit gamma n=1 Tax=labyrinthulid q... [more]
UPI001036A32C1.180e-1533.91AP-1 complex subunit gamma-2-like isoform X1 n=9 T... [more]
A0A4S4EZU1_CAMSI1.190e-1533.91GAE domain-containing protein n=2 Tax=Camellia sin... [more]
A0A7J7GGL1_CAMSI2.810e-1533.91GAE domain-containing protein n=1 Tax=Camellia sin... [more]
A0A4D8YEI8_SALSN5.600e-1536.21AP-1 complex subunit gamma n=10 Tax=Salvia TaxID=2... [more]
A0A4D9BPW3_SALSN7.600e-1536.21AP-1 complex subunit gamma n=1 Tax=Salvia splenden... [more]
A0A022Q1N9_ERYGU1.030e-1436.84AP-1 complex subunit gamma n=1 Tax=Erythranthe gut... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainSMARTSM00809alpha_adaptinc2coord: 1..114
e-value: 1.0E-24
score: 98.1
IPR008152Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomainPFAMPF02883Alpha_adaptinC2coord: 2..114
e-value: 8.1E-25
score: 87.3
NoneNo IPR availableGENE3D2.60.40.1230coord: 1..116
e-value: 7.1E-30
score: 105.4
NoneNo IPR availablePANTHERPTHR22780ADAPTIN, ALPHA/GAMMA/EPSILONcoord: 1..115
NoneNo IPR availablePANTHERPTHR22780:SF32coord: 1..115
IPR008153Gamma-adaptin ear (GAE) domainPROSITEPS50180GAEcoord: 1..114
score: 36.746
IPR013041Clathrin adaptor, appendage, Ig-like subdomain superfamilySUPERFAMILY49348Clathrin adaptor appendage domaincoord: 2..115

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1331contigE-siliculosus-1a_F_contig1331:608..2889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1331.2004.1mRNA_E-siliculosus-1a_F_contig1331.2004.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1331 467..3368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1331.2004.1 ID=prot_E-siliculosus-1a_F_contig1331.2004.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2004.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=118bp
MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVP
KSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRG
TVNVAEVAQVAQFPAGF*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013041Clathrin_app_Ig-like_sf
IPR008153GAE_dom
IPR008152Clathrin_a/b/g-adaptin_app_Ig