mRNA_E-siliculosus-1a_F_contig1331.2004.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1331.2004.1
Unique NamemRNA_E-siliculosus-1a_F_contig1331.2004.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: D7FHP4_ECTSI (AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHP4_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 2.090e-82
Identity = 147/152 (96.71%), Postives = 147/152 (96.71%), Query Frame = 1 
Query:   43 AAPANTAAPAP--VAVGGDSDDFGGFEVAPPREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            AAPANTAAP P  VAVGGDSDDFGGFEVAPPREEKMVAFDKSGLRVVFSPSKPD SDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPP SDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF
Sbjct:  737 AAPANTAAPGPGPVAVGGDSDDFGGFEVAPPREEKMVAFDKSGLRVVFSPSKPDASDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPHSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 888
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A7S2S4J2_9STRA (AP-1 complex subunit gamma n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2S4J2_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.730e-18
Identity = 69/171 (40.35%), Postives = 95/171 (55.56%), Query Frame = 1 
Query:    1 ADVFGGGGGLVPSKAAPANTAAPAPVAVGGDS--DDFGGF-----EVAPPREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            A +FGG GG     AAPA  AAPA  + GGD     FGG      E  PP    +VA++++ + V  + ++   S   +  V+  ++NT   EIS  VFQAAVPK  ++KM   SG  LPP   G V Q IN+ N+MQG+K ++MK+KI +     NV + A V+ FP G 
Sbjct:  693 AGIFGGDGG-----AAPAPAAAPAVPSSGGDDLLGMFGGSSTPAAETFPP----LVAYNQNNVNVTMNFARGPES--KQVVVTAVYSNTGGVEISNFVFQAAVPKFISLKMEPPSGDTLPPFGTGQVQQRINLVNSMQGSKDIIMKVKIAYTANGENVVQQATVSGFPQGL 852
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A8K0GM44_9ROSA (Uncharacterized protein n=1 Tax=Rhamnella rubrinervis TaxID=2594499 RepID=A0A8K0GM44_9ROSA)

HSP 1 Score: 94.0 bits (232), Expect = 1.680e-17
Identity = 58/160 (36.25%), Postives = 85/160 (53.12%), Query Frame = 1 
Query:   34 PSKAAPANTAAPAPVAVGGDSDDFGGFEVAPPREE-------KMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            PS+   A +A  APV      D   GF   PP+ E        +VAF+ S L++ F+ SKP P +P  + +   FTN S    S  VFQAAVPK   + +   S + LP   +GVV+Q + VTN+  G KS++M+++I ++    +V E  Q+  FP G 
Sbjct:  728 PSQPKQAASAGAAPVV-----DFLDGFAANPPKPEDNGSAYPSIVAFESSALKMEFNFSKP-PGNPQTTLIQATFTNLSSNNYSDFVFQAAVPKFLQLHLDPASSNTLPASGNGVVTQNLKVTNSQHGKKSIVMRVRIAYKMNNKDVLEEGQINNFPRGL 881
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D9A8B5_SALSN (AP-1 complex subunit gamma n=7 Tax=Salvia TaxID=21880 RepID=A0A4D9A8B5_SALSN)

HSP 1 Score: 86.3 bits (212), Expect = 6.520e-15
Identity = 50/136 (36.76%), Postives = 72/136 (52.94%), Query Frame = 1 
Query:   97 DDFGGFEVAP----PREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            D FG     P    P    +VAF+ S L+V F+ SK DPS    + +   FTN S    S  VFQAAVPK   + +   S + LP   DG ++Q + V+N+  G KSL+M+++I ++    +V E  Q+  FP G 
Sbjct:  790 DGFGATPSVPVTDAPTYPSIVAFESSSLKVTFNFSK-DPSSQHTTLIEAQFTNKSPNIYSNFVFQAAVPKFLQLHLDPASSNTLPASGDGSITQTLRVSNSQHGKKSLIMRMRINYKANNKDVLEEGQINNFPRGL 924
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4S4EZU1_CAMSI (GAE domain-containing protein n=2 Tax=Camellia sinensis TaxID=4442 RepID=A0A4S4EZU1_CAMSI)

HSP 1 Score: 84.0 bits (206), Expect = 1.270e-14
Identity = 40/120 (33.33%), Postives = 71/120 (59.17%), Query Frame = 1 
Query:  127 PREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 486
            P    +VAF+ + L+++F+ SKP P +P  + +   F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V E  Q+  FP+
Sbjct:  228 PASPSIVAFESNSLKIMFNISKP-PGNPQTTLIEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKMNNKDVLEEGQIKNFPS 346
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: UPI001036A32C (AP-1 complex subunit gamma-2-like isoform X1 n=9 Tax=Camellia sinensis TaxID=4442 RepID=UPI001036A32C)

HSP 1 Score: 84.7 bits (208), Expect = 2.110e-14
Identity = 40/120 (33.33%), Postives = 72/120 (60.00%), Query Frame = 1 
Query:  127 PREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 486
            P    +VAF+ + L+++F+ SKP P +P  + +   F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V+E  Q+  FP+
Sbjct:  777 PASPSIVAFESNSLKIMFNISKP-PGNPQTTLIEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKTNNKDVSEEGQIKNFPS 895
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A7J7GGL1_CAMSI (GAE domain-containing protein n=1 Tax=Camellia sinensis TaxID=4442 RepID=A0A7J7GGL1_CAMSI)

HSP 1 Score: 84.3 bits (207), Expect = 2.150e-14
Identity = 47/145 (32.41%), Postives = 78/145 (53.79%), Query Frame = 1 
Query:   73 PVAVGGDSDDFGGFEVAP-------PREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPA 486
            P A G   D   GF   P       P    +VAF+ + L+++F+ SKP P +P  +     F N S    +  +FQAAVPK   +++   S + LP   DG+++Q + VTN+  G KSL+M++++ ++    +V+E  Q+  FP+
Sbjct:  385 PPAGGSMMDLLDGFASIPEKLEDNGPASPSIVAFESNSLKIMFNISKP-PGNPQTTLTEANFINKSPNVYTDFIFQAAVPKFLQLQLDPASSNTLPASGDGLITQNMRVTNSQHGKKSLVMRIRLGYKTNNKDVSEEGQIKNFPS 528
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A022Q1N9_ERYGU (AP-1 complex subunit gamma n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022Q1N9_ERYGU)

HSP 1 Score: 84.0 bits (206), Expect = 3.780e-14
Identity = 56/155 (36.13%), Postives = 83/155 (53.55%), Query Frame = 1 
Query:   61 AAPAPVA-----VGGDS-----DDFGGFEVAP----PREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFP 483
            A+P+P A     VGG S     DDFG     P    P    ++AF+ S L+V F+ SK +P  P  + +   FTN S    S  VFQAAVPK   + +   S + LP  S+  ++Q++ V+N+  G KSL+M+L+I ++    +V E  Q+  FP
Sbjct:  719 ASPSPSAQTSTPVGGSSMLDLLDDFGTTLSLPETNGPTYPAIIAFESSSLKVTFNFSK-EPGSPQTTLIEARFTNKSPNAYSNFVFQAAVPKFLQLHLDPASSNTLPANSNDSITQKLRVSNSQHGKKSLVMRLRINYKVNDKDVLEEGQINNFP 872
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D8YEI8_SALSN (AP-1 complex subunit gamma n=10 Tax=Salvia TaxID=21880 RepID=A0A4D8YEI8_SALSN)

HSP 1 Score: 83.6 bits (205), Expect = 5.240e-14
Identity = 44/126 (34.92%), Postives = 72/126 (57.14%), Query Frame = 1 
Query:  115 EVAPPREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            E + P    +VAF+   L+V F+ SK +P +P  + +   F N S +  S  VFQAAVPK   + +   SG  LP   +G ++Q++ V+N+  G KSL+M+++I ++    +V E  Q++ FP G 
Sbjct:  833 ETSGPSYPSVVAFESGSLKVTFNFSK-EPGNPQTTTIEAQFVNKSPDIYSSFVFQAAVPKFLQLHLEPASGSTLPASGNGSITQKLKVSNSQHGKKSLVMRVRINYKAKDKDVLEDGQISNFPHGL 957
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BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Match: A0A4D9BPW3_SALSN (AP-1 complex subunit gamma n=1 Tax=Salvia splendens TaxID=180675 RepID=A0A4D9BPW3_SALSN)

HSP 1 Score: 83.2 bits (204), Expect = 6.900e-14
Identity = 44/126 (34.92%), Postives = 71/126 (56.35%), Query Frame = 1 
Query:  115 EVAPPREEKMVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVPKSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRGTVNVAEVAQVAQFPAGF 492
            E + P    +VAF+   L+V F+ SK +P +P  + +   F N S +  S  VFQAAVPK   + +   SG  LP   +G + Q++ V+N+  G KSL+M+++I ++    +V E  Q++ FP G 
Sbjct:  778 ETSGPSYPSVVAFESGSLKVTFNFSK-EPGNPQTTTIEAQFVNKSPDIYSNFVFQAAVPKFLQLHLEPASGSTLPASGNGSIMQKLKVSNSQHGKKSLVMRVRINYKANGKDVLEDGQISNFPHGL 902
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1331.2004.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FHP4_ECTSI2.090e-8296.71AP-1 complex subunit gamma n=2 Tax=Ectocarpus TaxI... [more]
A0A7S2S4J2_9STRA3.730e-1840.35AP-1 complex subunit gamma n=1 Tax=labyrinthulid q... [more]
A0A8K0GM44_9ROSA1.680e-1736.25Uncharacterized protein n=1 Tax=Rhamnella rubriner... [more]
A0A4D9A8B5_SALSN6.520e-1536.76AP-1 complex subunit gamma n=7 Tax=Salvia TaxID=21... [more]
A0A4S4EZU1_CAMSI1.270e-1433.33GAE domain-containing protein n=2 Tax=Camellia sin... [more]
UPI001036A32C2.110e-1433.33AP-1 complex subunit gamma-2-like isoform X1 n=9 T... [more]
A0A7J7GGL1_CAMSI2.150e-1432.41GAE domain-containing protein n=1 Tax=Camellia sin... [more]
A0A022Q1N9_ERYGU3.780e-1436.13AP-1 complex subunit gamma n=1 Tax=Erythranthe gut... [more]
A0A4D8YEI8_SALSN5.240e-1434.92AP-1 complex subunit gamma n=10 Tax=Salvia TaxID=2... [more]
A0A4D9BPW3_SALSN6.900e-1434.92AP-1 complex subunit gamma n=1 Tax=Salvia splenden... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1331contigE-siliculosus-1a_F_contig1331:467..3368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size354
Model size974
Exons4
Hectar predicted targeting categoryother localisation
BRITEko00000,ko00001,ko03036,ko04131
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
COG Functional cat.G
EggNOG OGsCOG4354@1,KOG1062@2759
EggNOG free text desc.intracellular protein transport
KEGG Pathwayko04142,map04142
KEGG koko:K11279,ko:K12391
Seed eggNOG ortholog2880.D7FHP4
Seed ortholog evalue9.5e-56
Seed ortholog score222.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1331.2004.1prot_E-siliculosus-1a_F_contig1331.2004.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1331 608..2889 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.8102894-UTR-E-siliculosus-1a_F_contig1331:466..6071622927851.8102894-UTR-E-siliculosus-1a_F_contig1331:466..607Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 467..607 +
1696318708.297468-UTR-E-siliculosus-1a_F_contig1331:466..6071696318708.297468-UTR-E-siliculosus-1a_F_contig1331:466..607Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 467..607 +
1622927851.8970802-UTR-E-siliculosus-1a_F_contig1331:2889..33681622927851.8970802-UTR-E-siliculosus-1a_F_contig1331:2889..3368Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 2890..3368 +
1696318708.344504-UTR-E-siliculosus-1a_F_contig1331:2889..33681696318708.344504-UTR-E-siliculosus-1a_F_contig1331:2889..3368Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1331 2890..3368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927851.8422525-CDS-E-siliculosus-1a_F_contig1331:607..6131622927851.8422525-CDS-E-siliculosus-1a_F_contig1331:607..613Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 608..613 +
1696318708.3088992-CDS-E-siliculosus-1a_F_contig1331:607..6131696318708.3088992-CDS-E-siliculosus-1a_F_contig1331:607..613Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 608..613 +
1622927851.8572934-CDS-E-siliculosus-1a_F_contig1331:1392..15001622927851.8572934-CDS-E-siliculosus-1a_F_contig1331:1392..1500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 1393..1500 +
1696318708.317532-CDS-E-siliculosus-1a_F_contig1331:1392..15001696318708.317532-CDS-E-siliculosus-1a_F_contig1331:1392..1500Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 1393..1500 +
1622927851.8716893-CDS-E-siliculosus-1a_F_contig1331:2217..23091622927851.8716893-CDS-E-siliculosus-1a_F_contig1331:2217..2309Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 2218..2309 +
1696318708.3264716-CDS-E-siliculosus-1a_F_contig1331:2217..23091696318708.3264716-CDS-E-siliculosus-1a_F_contig1331:2217..2309Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 2218..2309 +
1622927851.885884-CDS-E-siliculosus-1a_F_contig1331:2741..28891622927851.885884-CDS-E-siliculosus-1a_F_contig1331:2741..2889Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 2742..2889 +
1696318708.3357644-CDS-E-siliculosus-1a_F_contig1331:2741..28891696318708.3357644-CDS-E-siliculosus-1a_F_contig1331:2741..2889Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1331 2742..2889 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1331.2004.1

>prot_E-siliculosus-1a_F_contig1331.2004.1 ID=prot_E-siliculosus-1a_F_contig1331.2004.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2004.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=118bp
MVAFDKSGLRVVFSPSKPDPSDPSKSKVSIAFTNTSDEEISGLVFQAAVP
KSFTMKMGALSGHNLPPRSDGVVSQEINVTNAMQGTKSLMMKLKIQFRRG
TVNVAEVAQVAQFPAGF*
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mRNA from alignment at E-siliculosus-1a_F_contig1331:467..3368+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1331.2004.1 ID=mRNA_E-siliculosus-1a_F_contig1331.2004.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2004.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=2902bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1331:467..3368+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCGGATGTGTTCGGGGGTGGGGGGGGGCTGGTGCCGAGTAAGGCGGCGCC
GGCGAATACGGCGGCCCCGGCGCCGGTGGCGGTCGGCGGAGATAGCGACG
ACTTCGGAGGGTTTGAGGTTGCGCCGCCTCGAGAGGAGAAGATGGTGGTG
AGAGAGTCACACACAGACAGACAGACAGACAGACAGACAGACAGACAGAT
AGGGAGAGCGCCGATATACGGCAGTACAATGGTAGACGCGGACCGAACGG
GCTTTCTTTTCGCGCTCTGTTTTTTTTGTCGCATCCCCACAGCGCGGGTG
TTGGTCCTGCTGGCATCGCTGTTGTTGGTGTTTTCCTCGTGGTTTAGGAA
GCGGGGTTTGGGATACTCTGTATTCATCCTAACCACGGATACCGGCATGT
CTCTTTGCTTGTAAGCTCCTCGATTGATTTTCTGCGCTTTGGTCATTTTG
TTGACGCAAGCATTTGGCGAGACATGTGGGTGGGCGGGTACGTGCATGCC
TTTTTGGTTTTTAAGCTCCTGGTTTGATTTTCTTCGGGTTCGTCGGCGTT
TTCGACGGAAACGTTTGGCGAGTCTTGTGGGGGGGCGTATGGGCATGCCC
CGTCTGGTCGACTCTCCTCGCGGACGGGTACAGAACGTGCCGCATTCGAG
AAACTCTTAAGCTTTGCGCAGCTCTCGCCCCTGTGCTTGATCAGAAGGGA
CACGAACACGATGTTGTTATTTTTTTGTCGGGTACGGGGGATAGATGTCA
TACAGGAGATACACGTCATGTCATTGGAATTCGTGACAACCAAGCCCCTA
GTTTCTTAGCCTACCAAAGTCTTGGTGGTTGACCAGTACCGACTCTGGCA
AGCATCATCTCACCCCCAACCCTCATGAGTATCCCCCCCTCCCTACCCCT
GCCCCTTGACCCTTTGGCCGTTGCAGGCGTTCGATAAGAGCGGTTTGAGA
GTAGTGTTTTCGCCGTCGAAGCCGGACCCGTCGGATCCTTCGAAGAGCAA
GGTCTCGATCGCCTTCACCAACACCTCGGACGAGGTATGTCGTCGTTGTT
GTAATGGTTGTTGCTGTGGCTGTTGTTGCTGCTGCTGATGCTGGTATGGT
GTTGTTGTTCTTGGTGATGCTGTTGTTATCGCTGGGGCTGGTAGTGGTTG
GTGTTGTTGTTGTTGGTGATGGTGGTGGTGGTCATGGTGTCATTGTTGTT
GTTGTTGTTGACGTCTTCGTTGCTGCCTTTGCTGTTGTTGTCGTTTTTGT
CTTAACTTGGGATCGCCTCCTCGGCCTCTTTGCCAGCACCTGCATCGTCT
GCACAGAGCACTATCTCAAGCGTCTAGAAAAGCCGTGGGCGCATGTTACC
GTGTCCGTACCGGCGGCTTTGTTGCGGCTGTGACAGGGCGACGACAACCA
CCACCACCACAACCGCCACCAGTATTCTCTTGGTTGCCTCAAATCATGCT
CTTGAGTGTGTTTTGCCGAACACCGGAATCGAAGTTCTTCTTGCACAACA
GCGGAATCGGAACACGGCAGAATATATTCCTCCCCATCGAATTTCCACCG
GTGCACAATTGACCCCACTTGCAGTTTTAGTTCCCCACGTCTCAGGCTCA
AGTTGTACAGGTAGCTCTGCCGCTGCTCCGCGCACGAAGCACGATGTTGG
CCACAGACGCAACGTTTGGAGGCTGTTGCGCCGAGACCCACACGCCCTCG
GTTCGGTTATTTTTTCATTTTGATCCGGTTTTGCTTCGTCGCAATATGCA
GGAAATTTCCGGCCTGGTGTTCCAGGCTGCGGTGCCCAAGTCCTTTACGA
TGAAAATGGGAGCTCTGTCGGGCCACAATCTACCCCCCCGCAGGTGAGAT
AAGGGGGCTGCACAGAACAGTCAAGAGGGACAGCAGTGTTAAGGTCATGG
AATGCATGCTCACTGGACAGATACTGCGGCATAGGAATAGATGGGTTGGG
AGAGGAAATTATTTCTATATTTTATACCATGTTAGATAGATAGGGAGGGA
GAGGAAATGGGCTGAAAAGGCGGGAAGTCATATCGTGGACAGGGACGATA
AGATATTATCGGACAGGGAAAACATGCTTGAGCCAGCTTTTGGCAAAGTA
GGAAGCAACGGTTGGCCAGACCCTGTGAGAATGGCCATGATGGACCCTGT
GATAACATGCTCCGTCCTCTCCAGGCAAACGTCGTATGACTTGAAGGCAT
GCACAACATGAGTGCGCCCTCCCTCCCCCTGTCTGTGGACGTCTTCCGAC
CCCCTCCGCTGCCCCACCTCCCCAGCGACGGCGTGGTGTCTCAGGAAATC
AACGTGACGAACGCGATGCAAGGGACCAAGAGCTTGATGATGAAGCTCAA
GATTCAGTTCCGACGCGGGACTGTCAACGTAGCGGAGGTGGCGCAGGTGG
CTCAGTTCCCTGCCGGCTTCTGACGGGAAGGAATGCCACGGTCGTGACGC
CAGGGTAGCCGGCGGAAGACGATGCGACCCCCCCCTCCCCCCGCCCGCCT
GGAGACGTTTTTCCGGCTGTGTGGGTTTATCCACGCCAAGGAGAGGCGTA
GTGTGGCGGAGCGATAGAGTTTCCTGATTGGTCTTGGCTAAACTACAGAG
CGTTTTTGTTGTTCCTGCCGCCATTTTATTTTCTTCTTTTTTTTTGTGCC
TCGTTGTGTCCGAGGGTTCGTACAATAGTAAGTTTTTTTTGTCTATCTGG
GGGCGGTGGGTCTGTCCCGCCCACCCCAATTGAAACAGGAGTGCGTGTTC
GTGTGTCGTTTGTTCGTTGCTGCACCTACTTCAGTGGTGACGGGTGAAAA
GCGTAAGGCGGATGATGAACGATGTTTTAAATGTAATAAAGAACAAGGGC
CAGGCGCGAGGTGACAGACAGACTCATCTGCAACTACACCCTTCGATAGC
GA
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1331:467..3368+

>mRNA_E-siliculosus-1a_F_contig1331.2004.1 ID=mRNA_E-siliculosus-1a_F_contig1331.2004.1|Name=mRNA_E-siliculosus-1a_F_contig1331.2004.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=708bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1331:467..3368+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGTGATGGTGGCGTTCGATAAGAGCGGTTTGAGAGTAGTGTTTTCGCC
GTCGAAGCCGGACCCGTCGGATCCTTCGAAGAGCAAGGTCTCGATCGCCT
TCACCAACACCTCGGACGAGGCGTTCGATAAGAGCGGTTTGAGAGTAGTG
TTTTCGCCGTCGAAGCCGGACCCGTCGGATCCTTCGAAGAGCAAGGTCTC
GATCGCCTTCACCAACACCTCGGACGAGGAAATTTCCGGCCTGGTGTTCC
AGGCTGCGGTGCCCAAGTCCTTTACGATGAAAATGGGAGCTCTGTCGGGC
CACAATCTACCCCCCCGCAGGAAATTTCCGGCCTGGTGTTCCAGGCTGCG
GTGCCCAAGTCCTTTACGATGAAAATGGGAGCTCTGTCGGGCCACAATCT
ACCCCCCCGCAGCGACGGCGTGGTGTCTCAGGAAATCAACGTGACGAACG
CGATGCAAGGGACCAAGAGCTTGATGATGAAGCTCAAGATTCAGTTCCGA
CGCGGGACTGTCAACGTAGCGGAGGTGGCGCAGGTGGCTCAGTTCCCTGC
CGGCTTCTGACGACGGCGTGGTGTCTCAGGAAATCAACGTGACGAACGCG
ATGCAAGGGACCAAGAGCTTGATGATGAAGCTCAAGATTCAGTTCCGACG
CGGGACTGTCAACGTAGCGGAGGTGGCGCAGGTGGCTCAGTTCCCTGCCG
GCTTCTGA
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