prot_E-siliculosus-1a_F_contig1330.2003.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1330.2003.1
Unique Nameprot_E-siliculosus-1a_F_contig1330.2003.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length168
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: A0A6H5KZU3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZU3_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.990e-53
Identity = 108/161 (67.08%), Postives = 121/161 (75.16%), Query Frame = 0
Query:   10 LQQLRGGRMMGSSPSHCVGGLRIATQSEALAVIIPVPHQNTGLHAPGLLNAPDHVLPSNNQVPNAEDVGAEHPPPGYVVPVEASADDAEPLTTEIKGVELLQEGSGGWAG--VETYVTSTNELNGNGGVFVAPLGGGTSVDSAKEGEE-EAFCAGGDADTR 167
            +  LRG  MMGSSP H +GGL+IA +SEAL V+IPVPHQN GL+A GLLN     + S+NQV NAEDV A+HP PGY+VPV+ASADDA+PLT   KGVE LQEGSGG AG  VET +TS  E N N G FVAPLGGG SVDSAK  EE EAF A G ADTR
Sbjct:   18 ISALRGWGMMGSSPGHRIGGLKIAARSEALTVVIPVPHQNKGLYASGLLNV---RVSSDNQVTNAEDVAAKHPLPGYIVPVQASADDADPLTAN-KGVEALQEGSGGGAGTDVETTMTSKAEFNRNAGTFVAPLGGG-SVDSAKTSEEDEAFFATGHADTR 173          
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: A0A6H5J5K9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J5K9_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 6.180e-46
Identity = 102/154 (66.23%), Postives = 114/154 (74.03%), Query Frame = 0
Query:   13 LRGGRMMGSSPSHCVGGLRIATQSEALAVIIPVPHQNTGLHAPGLLNAPDHVLPSNNQVPNAEDVGAEHPPPGYVVPVEASADDAEPLTTEIKGVELLQEGSGGWAG--VETYVTST--NELNGNGGVFVAPLGGGTSVDSAKEGEEEAFCAGG 162
            LRGG MMGSSP H +GGL+IA  SEAL  I P PHQN  L+APGLLNA    + ++NQVPNAEDV AEHP  GY+VPV+A+ADD E L    KGVELLQEGS G  G  VET+VTST  N+ NGNGG FVAP+GGG SVDSA   EEEAF  GG
Sbjct:   21 LRGGGMMGSSPGHRIGGLKIAAASEAL--INPAPHQNKRLYAPGLLNA---RVSNDNQVPNAEDVVAEHPLRGYIVPVQAAADDEEHLAAN-KGVELLQEGSDGGGGTDVETHVTSTCTNDFNGNGGAFVAPVGGG-SVDSAMNSEEEAFPMGG 167          
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: A0A6H5JVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI1_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.550e-23
Identity = 61/93 (65.59%), Postives = 68/93 (73.12%), Query Frame = 0
Query:   13 LRGGRMMGSSPSHCVGGLRIATQSEALAVIIPVPHQNTGLHAPGLLNAPDHVLPSNNQVPNAEDVGAEHPPPGYVVPVEASADDAEPLTTEIK 105
            LRGGR+MGSSP H +GGL+ A  SEAL  I P   QN  L+APGLLNA      S +  PNAEDV AEHP PGY+VPV+ASADDAEPLT EIK
Sbjct:   16 LRGGRIMGSSPGHRIGGLKKAAASEAL--INPASRQNKRLYAPGLLNA----RASRDYQPNAEDVVAEHPLPGYIVPVQASADDAEPLTWEIK 102          
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: D7FNC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNC7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 5.680e-21
Identity = 53/75 (70.67%), Postives = 59/75 (78.67%), Query Frame = 0
Query:   31 RIATQSEALAVIIPVPHQNTGLHAPGLLNAPDHVLPSNNQVPNAEDVGAEHPPPGYVVPVEASADDAEPLTTEIK 105
            RIA+ SEAL VI+P PHQN  L+AP LLNA       +NQV NAEDV AEHP PGY+VPV+ASADDAEPLTTEIK
Sbjct:    5 RIASPSEALTVIVPAPHQNKRLYAPELLNA---RASEDNQVTNAEDVVAEHPLPGYIVPVQASADDAEPLTTEIK 76          
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: D7G964_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G964_ECTSI)

HSP 1 Score: 94.4 bits (233), Expect = 2.290e-19
Identity = 68/135 (50.37%), Postives = 79/135 (58.52%), Query Frame = 0
Query:   65 LPSNN-QVPNAEDVGAEHPPPGYVVPVEASADDA----------------------------EPLTTEIKGVELLQEGSGGWAGVETYVTSTNELNGNGGVFVAPLGGGTSVDSAK--EGEEEAFCAGGDADTRV 168
            LPS++ QV NAED    HPPP  +VP + +A+ A                            E L+TE  GVE+LQEGSGG A VETYV +T+E NGNGG FVAPLGGGTSVDSAK  EG E  F  GG AD R+
Sbjct:   90 LPSDDKQVANAEDDVPAHPPPFCIVPTQTTAEPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXEQLSTE--GVEVLQEGSGGSADVETYVQTTHEFNGNGGGFVAPLGGGTSVDSAKGLEGGEAFFATGG-ADARM 221          
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Match: A0A6H5K2H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H8_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 1.850e-17
Identity = 48/68 (70.59%), Postives = 55/68 (80.88%), Query Frame = 0
Query:  103 EIKGVELLQEGSGGWAGVETYVTSTNELNGNGGVFVAPLGGGTS-VDSAKEGE-EEAFCAGGDADTRV 168
            + +GVELLQEG GGWA VET +TST+E +GNGG FVAPLGGGTS VDS K  E +EAF A GDADTR+
Sbjct:   79 DTRGVELLQEGGGGWADVETTMTSTDEFSGNGGAFVAPLGGGTSSVDSTKGLEKDEAFFATGDADTRM 146          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1330.2003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KZU3_9PHAE4.990e-5367.08Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J5K9_9PHAE6.180e-4666.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVI1_9PHAE1.550e-2365.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FNC7_ECTSI5.680e-2170.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G964_ECTSI2.290e-1950.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K2H8_9PHAE1.850e-1770.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1330contigE-siliculosus-1a_F_contig1330:29123..32276 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1330.2003.1mRNA_E-siliculosus-1a_F_contig1330.2003.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1330 28340..32276 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1330.2003.1 ID=prot_E-siliculosus-1a_F_contig1330.2003.1|Name=mRNA_E-siliculosus-1a_F_contig1330.2003.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=168bp
MDGNNMMTMLQQLRGGRMMGSSPSHCVGGLRIATQSEALAVIIPVPHQNT
GLHAPGLLNAPDHVLPSNNQVPNAEDVGAEHPPPGYVVPVEASADDAEPL
TTEIKGVELLQEGSGGWAGVETYVTSTNELNGNGGVFVAPLGGGTSVDSA
KEGEEEAFCAGGDADTRV
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