prot_E-siliculosus-1a_F_contig133.1994.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig133.1994.1
Unique Nameprot_E-siliculosus-1a_F_contig133.1994.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length457
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: A0A6H5L263_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L263_9PHAE)

HSP 1 Score: 779 bits (2012), Expect = 1.310e-282
Identity = 413/447 (92.39%), Postives = 423/447 (94.63%), Query Frame = 0
Query:   12 MASFGKQRQWGLLRFILAMAVGSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPTSTTAVAAAAAAKEAAGELDFGGATPPSRTRAHGGVSRGMPLAVSRQPPRGEILEAASTTAAATEPA--AAGEEDLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSPXXXXXXXXXXXXVITAPAMQAAHADGGERGDNGAGGDRLPLLSNSRGAPIGGGSIQDTSPV 456
            M S+GKQRQWGLLR +LAMA+GSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGP STTAVA+A A  EAAGELDFGGA PPSRTRAH GVSRGMPLAVSRQPPRGEILEA STTAAAT     AAGEEDLPSAALISRSEKDDP+GCTFETKVLNAQ AGFSMVIVYDSR+ENLFKMGRSS+KG KHP+VEIPLVLV+HASGLALKALI T SDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSP  XXXXXXXX  VITAPAMQ AHADG ERGD+GAGGDRLPLLSNSRGAPIGGGSIQDTSPV
Sbjct:    1 MTSYGKQRQWGLLRVVLAMAIGSIDLGAAVILVYNEGTTRFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPLSTTAVASATAVNEAAGELDFGGAAPPSRTRAHSGVSRGMPLAVSRQPPRGEILEAVSTTAAATXXXXXAAGEEDLPSAALISRSEKDDPSGCTFETKVLNAQGAGFSMVIVYDSREENLFKMGRSSSKGAKHPKVEIPLVLVSHASGLALKALIETASDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSPSSXXXXXXXXAAVITAPAMQPAHADGVERGDDGAGGDRLPLLSNSRGAPIGGGSIQDTSPV 447          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: A0A835Z7P9_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7P9_9STRA)

HSP 1 Score: 183 bits (464), Expect = 8.760e-50
Identity = 108/244 (44.26%), Postives = 146/244 (59.84%), Query Frame = 0
Query:  158 AAGEEDLPSAALISRSEKD----DPNGCTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYVDNTDPFG-MFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTN--RPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLT------------QRQRSCPMCKDPVT 382
            A G+ D+P  ALISRS +     DP  CTF  KV NA  AG ++ +V+D   E LF+M R  A GG     +IP VL++ +SG  L AL    +D  GP V+VD +DP+  MF ++++TM  +V GFL +LL C S+ + T HR LRRY+++       RP+SL + L++PE  V  G  LE DSC +CLEAYR+GDK+  L C H  HA C+ PWL             +RQR+CP+CK  VT
Sbjct:   77 AVGKTDMPVVALISRSLQSNMAKDPGSCTFAQKVDNAWRAGAALAVVFDYVDEPLFRMQR--ATGGPVDSAKIPSVLISASSGRVLHALATACADPLGPRVFVDASDPYEKMFESLNMTMIGVVCGFLTSLLACASLFLCTSHRLLRRYDAIGGHGRPPRPLSLAQALRMPEKSVTCGCGLEKDSCAICLEAYRVGDKVMHLNCGHVLHAHCLRPWLAVSIAGIATAQRPERQRTCPLCKGDVT 318          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: G3VTW2_SARHA (RING-type E3 ubiquitin transferase n=15 Tax=Metatheria TaxID=9263 RepID=G3VTW2_SARHA)

HSP 1 Score: 112 bits (279), Expect = 7.200e-24
Identity = 76/203 (37.44%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +VY+     L  M  +S +     Q+ IP V V   S   L++L       +G  V +  DNT P G +    L  F  V G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   92 CNFDLKVLNAQKAGYRAAVVYNVNSNELLNMVWNSEE--IQQQIWIPSVFVGETSSEYLRSLFVYD---KGARVLLVPDNTFPLGYY----LIPFTGVVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHNYQKGD--EYDVCAICLEEYEDGDKLRILPCAHAYHSHCVDPWLTQTRKTCPICKQPV 275          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: UPI0004431BC1 (E3 ubiquitin-protein ligase RNF167 isoform X2 n=2 Tax=Monodelphis domestica TaxID=13616 RepID=UPI0004431BC1)

HSP 1 Score: 110 bits (276), Expect = 1.670e-23
Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +VY+     L  M  +S +     Q+ IP V V   S   L++L       +G  V +  DNT P G +    L  F  + G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   85 CNFDLKVLNAQRAGYRAAVVYNVNSNELLNMVWNSEE--IQQQIWIPSVFVGETSSEYLRSLFVYD---KGARVLLVPDNTFPLGYY----LIPFTGIVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHDYQKGD--EYDVCAICLEEYEDGDKLRVLPCAHAYHSHCVDPWLTQTRKTCPICKQPV 268          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: F7D206_MONDO (RING-type E3 ubiquitin transferase n=6 Tax=Metatheria TaxID=9263 RepID=F7D206_MONDO)

HSP 1 Score: 110 bits (276), Expect = 1.880e-23
Identity = 75/203 (36.95%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +VY+     L  M  +S +     Q+ IP V V   S   L++L       +G  V +  DNT P G +    L  F  + G L+  L  G+++VV   ++ +R +      NR +S  ++ Q+P    ++G   E D C +CLE Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   92 CNFDLKVLNAQRAGYRAAVVYNVNSNELLNMVWNSEE--IQQQIWIPSVFVGETSSEYLRSLFVYD---KGARVLLVPDNTFPLGYY----LIPFTGIVGLLV--LAMGAVLVVRCIQHRKRLQR-----NR-LSKEQLKQIPTHDYQKGD--EYDVCAICLEEYEDGDKLRVLPCAHAYHSHCVDPWLTQTRKTCPICKQPV 275          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: A0A8E0S1D5_9TREM (E3 ubiquitin-protein ligase RNF13 n=1 Tax=Fasciolopsis buski TaxID=27845 RepID=A0A8E0S1D5_9TREM)

HSP 1 Score: 111 bits (277), Expect = 3.790e-23
Identity = 82/233 (35.19%), Postives = 123/233 (52.79%), Query Frame = 0
Query:  163 DLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYVDNTDPFGMFVT-VDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSS 394
            DLP   LI R       GC F+ KV+NAQ A FS VIVY++    +F MG  S K G    + IP V+V+  +G  LKA   + +D R  E  V     + + +  V L++ +LV   L+ L+ C +  +  + R +RR           +S   + +L   R E+ +R   ++CP+CLE ++  DK+R LPC HAFH  CI PWL + +R CP+C   V L+    PP++ +
Sbjct:   33 DLPFIVLIER------GGCDFDLKVINAQKANFSGVIVYNTVPNEIFPMGGGSYKDG----ISIPAVMVSKMAGEKLKAF--SVAD-RQKEFVVSMVSFYSLPLKYVLLSLLVLVGVSLIILIVCFAAHLCNMWRRMRRGR---------LSRRHLRRLQTKRFEK-ARDPYETCPICLEDFKDRDKIRILPCHHAFHTRCIDPWLLRNRRRCPVCNQTVELS---GPPSNEA 239          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: UPI001BC95D53 (E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Vulpes lagopus TaxID=494514 RepID=UPI001BC95D53)

HSP 1 Score: 108 bits (269), Expect = 1.230e-22
Identity = 71/212 (33.49%), Postives = 110/212 (51.89%), Query Frame = 0
Query:  180 GCTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHR-YLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPP 390
            GC F+ KVLNAQ AGF   +V++   + L  M R  A+  +  Q+ IP V V  +S   L+AL       +G +V +   D   + +   L  F  V G L+     G ++    H+  LRR           ++  ++ ++P    + G+    D C +CL+AY +G++LR LPC HA+H+ C+ PWLTQ +R+CP+CK PV  + G   P
Sbjct:   56 GCDFDLKVLNAQRAGFGAAVVHNVHSDALLSMARGGAEAQQ--QIAIPAVFVGESSAEYLRALFVYD---KGAQVLLVPDD--NLLLGYCLIPFTGVVGLLVVASGAGLVVRFVQHQGQLRRAR---------LTREQLERIPTRDHQRGA--PDDVCAICLDAYEVGERLRVLPCAHAYHSRCVDPWLTQARRTCPVCKQPVRRSPGAGGP 249          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: A0A2K5QW97_CEBIM (RING-type E3 ubiquitin transferase n=3 Tax=Simiiformes TaxID=314293 RepID=A0A2K5QW97_CEBIM)

HSP 1 Score: 108 bits (269), Expect = 2.140e-22
Identity = 71/203 (34.98%), Postives = 111/203 (54.68%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +V++     L  M  +S +     Q+ IP V +   S   L+AL       +G +V +  DNT P G +    L  F  + G L+  L  G++M+V   ++ +R +      NR ++  ++ Q+P    ++G +   D C +CL+ Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   92 CNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEE--IQQQIWIPSVFIGERSSEYLRALFVYE---KGAQVLLVPDNTFPLGYY----LIPFTGIVGLLV--LAMGAVMIVRCIQHRKRLQR-----NR-LTKDQLKQIPTHDYQKGDQY--DVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: A0A5F7ZRI1_MACMU (RING-type E3 ubiquitin transferase n=4 Tax=Boreoeutheria TaxID=1437010 RepID=A0A5F7ZRI1_MACMU)

HSP 1 Score: 107 bits (267), Expect = 3.220e-22
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +V++     L  M  +S +     Q+ IP V +   S   L+AL       +G  V +  DNT P G +    L  F  + G L+  L  G++M+V   ++ +R +      NR ++  ++ Q+P    ++G +   D C +CL+ Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   80 CNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEE--IQQQIWIPSVFIGERSSEYLRALFVYE---KGARVLLVPDNTFPLGYY----LIPFTGIVGLLV--LAMGAVMIVRCIQHRKRLQR-----NR-LTKEQLKQIPTHDYQKGDQY--DVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPV 263          
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Match: U3D921_CALJA (RING-type E3 ubiquitin transferase n=48 Tax=Boreoeutheria TaxID=1437010 RepID=U3D921_CALJA)

HSP 1 Score: 107 bits (267), Expect = 3.990e-22
Identity = 71/203 (34.98%), Postives = 110/203 (54.19%), Query Frame = 0
Query:  181 CTFETKVLNAQAAGFSMVIVYDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTRGPEVYV--DNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRRYESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLRSLPCQHAFHAGCITPWLTQRQRSCPMCKDPV 381
            C F+ KVLNAQ AG+   +V++     L  M  +S +     Q+ IP V +   S   L+AL       +G  V +  DNT P G +    L  F  + G L+  L  G++M+V   ++ +R +      NR ++  ++ Q+P    ++G +   D C +CL+ Y  GDKLR LPC HA+H+ C+ PWLTQ +++CP+CK PV
Sbjct:   92 CNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEE--IQQQIWIPSVFIGERSSEYLRALFVYE---KGARVLLVPDNTFPLGYY----LIPFTGIVGLLV--LAMGAVMIVRCIQHRKRLQR-----NR-LTKEQLKQIPTHDYQKGDQY--DVCAICLDEYEDGDKLRILPCAHAYHSRCVDPWLTQTRKTCPICKQPV 275          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig133.1994.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L263_9PHAE1.310e-28292.39RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z7P9_9STRA8.760e-5044.26RING-type domain-containing protein n=1 Tax=Tribon... [more]
G3VTW2_SARHA7.200e-2437.44RING-type E3 ubiquitin transferase n=15 Tax=Metath... [more]
UPI0004431BC11.670e-2336.95E3 ubiquitin-protein ligase RNF167 isoform X2 n=2 ... [more]
F7D206_MONDO1.880e-2336.95RING-type E3 ubiquitin transferase n=6 Tax=Metathe... [more]
A0A8E0S1D5_9TREM3.790e-2335.19E3 ubiquitin-protein ligase RNF13 n=1 Tax=Fasciolo... [more]
UPI001BC95D531.230e-2233.49E3 ubiquitin-protein ligase RNF167-like n=1 Tax=Vu... [more]
A0A2K5QW97_CEBIM2.140e-2234.98RING-type E3 ubiquitin transferase n=3 Tax=Simiifo... [more]
A0A5F7ZRI1_MACMU3.220e-2234.98RING-type E3 ubiquitin transferase n=4 Tax=Boreoeu... [more]
U3D921_CALJA3.990e-2234.98RING-type E3 ubiquitin transferase n=48 Tax=Boreoe... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 336..377
e-value: 3.4E-9
score: 46.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 334..378
e-value: 7.9E-13
score: 48.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 336..378
score: 12.637
IPR003137PA domainPFAMPF02225PAcoord: 166..239
e-value: 1.0E-7
score: 31.9
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 315..384
e-value: 6.7E-19
score: 68.9
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 335..410
NoneNo IPR availablePANTHERPTHR22765:SF247RECEPTOR HOMOLOGY REGION, TRANSMEMBRANE DOMAIN- AND RING DOMAIN-CONTAINING PROTEIN 4-RELATEDcoord: 180..241
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 335..410
NoneNo IPR availablePANTHERPTHR22765RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAININGcoord: 180..241
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 46..269
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 295..456
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..294
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 319..390
NoneNo IPR availableTMHMMTMhelixcoord: 270..292
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig133contigE-siliculosus-1a_F_contig133:28280..33696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig133.1994.1mRNA_E-siliculosus-1a_F_contig133.1994.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig133 28280..33696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig133.1994.1 ID=prot_E-siliculosus-1a_F_contig133.1994.1|Name=mRNA_E-siliculosus-1a_F_contig133.1994.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=457bp
RPPHRNTRYGEMASFGKQRQWGLLRFILAMAVGSIDLGAAVILVYNEGTT
RFDDVPSMDNFGPRIPEEGFAGRLQLAQPNVYACSAISGPTSTTAVAAAA
AAKEAAGELDFGGATPPSRTRAHGGVSRGMPLAVSRQPPRGEILEAASTT
AAATEPAAAGEEDLPSAALISRSEKDDPNGCTFETKVLNAQAAGFSMVIV
YDSRQENLFKMGRSSAKGGKHPQVEIPLVLVTHASGLALKALIATTSDTR
GPEVYVDNTDPFGMFVTVDLTMFMLVTGFLLALLTCGSMMVVTLHRYLRR
YESLVAGTNRPMSLPEVLQLPEVRVEEGSRLEGDSCPVCLEAYRIGDKLR
SLPCQHAFHAGCITPWLTQRQRSCPMCKDPVTLTVGLAPPTSSSPSSSSA
SSAAPAAVITAPAMQAAHADGGERGDNGAGGDRLPLLSNSRGAPIGGGSI
QDTSPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR003137PA_domain
IPR001841Znf_RING