prot_E-siliculosus-1a_F_contig13104.1898.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig13104.1898.1
Unique Name	prot_E-siliculosus-1a_F_contig13104.1898.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	57

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot
Match: A0A7S0J643_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0J643_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.420e-8
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0

Query:    1 VEAADENGTTPLMFACRGGHVLAFSQLLEAGANPVA-CTSKGSTPLHFAASAG 52
            V AAD++G +PL  AC GGH     +LL+AGA P A C  KG TP+HFA + G
Sbjct:   55 VNAADDDGLSPLHLACVGGHAAVAKELLDAGALPTARCAPKGWTPVHFATAVG 107

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BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot
Match: A0A835EG38_9POAL (Uncharacterized protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835EG38_9POAL)

HSP 1 Score: 52.8 bits (125), Expect = 1.550e-6
Identity = 28/52 (53.85%), Postives = 33/52 (63.46%), Query Frame = 0

Query:    1 VEAADENGTTPLMFACRGGHVLAFSQLLEAGANPVACTSKGSTPLHFAASAG 52
            V AADE+G TPL++A RG  V     LL+ GANP      GSTPLH AA+ G
Sbjct:  400 VNAADESGETPLVYAVRGDTVDTVQYLLDHGANPDKHDGNGSTPLHLAAAGG 451

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BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot
Match: A0A2B7XTM4_9EURO (TKL protein kinase n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7XTM4_9EURO)

HSP 1 Score: 49.7 bits (117), Expect = 1.910e-5
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0

Query:    5 DENGTTPLMFACRGGHVLAFSQLLEAGANPVACTSKGSTPLHF 47
            DE+ TTPL+ ACR GH+    QL+ +GANP      G TPLH+
Sbjct:  630 DEDSTTPLLCACRAGHLEVAEQLVASGANPSTANLIGETPLHW 672

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BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot
Match: UPI00158DC63B (ankyrin-1-like n=1 Tax=Chelonus insularis TaxID=460826 RepID=UPI00158DC63B)

HSP 1 Score: 49.3 bits (116), Expect = 2.610e-5
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 0

Query:    1 VEAADENGTTPLMFACRGGHVLAFSQLLEAGANPVACTSKGSTPLHF 47
            +EAADE G TPL+ AC  G+V+A   LL+  ANP      G TPLHF
Sbjct:  554 IEAADEEGRTPLIEACIYGNVVAVKVLLDNHANPNVTNHCGQTPLHF 600

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig13104.1898.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A7S0J643_9EUKA	1.420e-8	52.83	Hypothetical protein (Fragment) n=1 Tax=Calcidiscu...	[more]
A0A835EG38_9POAL	1.550e-6	53.85	Uncharacterized protein n=1 Tax=Digitaria exilis T...	[more]
A0A2B7XTM4_9EURO	1.910e-5	51.16	TKL protein kinase n=1 Tax=Polytolypa hystricis UA...	[more]
UPI00158DC63B	2.610e-5	53.19	ankyrin-1-like n=1 Tax=Chelonus insularis TaxID=46...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 1..56 e-value: 1.6E-15 score: 58.8
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 2..53
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 6..53 e-value: 6.1E-9 score: 36.3
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 1..57 score: 17.131
None	No IPR available	PANTHER	PTHR24124	FAMILY NOT NAMED	coord: 1..53
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 7..39 score: 9.885

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig13104	contig	E-siliculosus-1a_F_contig13104:1144..1314 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig13104.1898.1	mRNA_E-siliculosus-1a_F_contig13104.1898.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig13104 1144..1314 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig13104.1898.1 ID=prot_E-siliculosus-1a_F_contig13104.1898.1|Name=mRNA_E-siliculosus-1a_F_contig13104.1898.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=57bp
VEAADENGTTPLMFACRGGHVLAFSQLLEAGANPVACTSKGSTPLHFAAS
AGCPPVN

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom
IPR036770	Ankyrin_rpt-contain_sf