prot_E-siliculosus-1a_F_contig1309.1878.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1309.1878.1
Unique Nameprot_E-siliculosus-1a_F_contig1309.1878.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length125
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: D8LGK4_ECTSI (alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LGK4_ECTSI)

HSP 1 Score: 214 bits (544), Expect = 2.550e-62
Identity = 116/129 (89.92%), Postives = 118/129 (91.47%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPDQKSVRV-----VLSVSRVVCGVASTLAIIIRRLTIRFEGLLCLFRLRLGAIKFRTCPMRDGLARLTPSISDIPRSGRALLR 124
            AFEKHCRLPVAFGSFPNVNDP+RQPEDRMESFFLAETLKYLYLIQDPDQK  R      VLSVSRVVCGVASTLAII RRLTIR  GLLCLFRLRLGAI+FRTCPMRDGLARLTPSISDIPRSGRALLR
Sbjct:  810 AFEKHCRLPVAFGSFPNVNDPNRQPEDRMESFFLAETLKYLYLIQDPDQKERRACCCLFVLSVSRVVCGVASTLAII-RRLTIR-HGLLCLFRLRLGAIEFRTCPMRDGLARLTPSISDIPRSGRALLR 936
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S3XK61_HETAK (alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XK61_HETAK)

HSP 1 Score: 79.7 bits (195), Expect = 6.890e-15
Identity = 34/49 (69.39%), Postives = 41/49 (83.67%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPDQ 49
            A EKHCR  +A+G+ P+V +  R+P+DRMESFFLAET KYLYLIQDPDQ
Sbjct:  549 AIEKHCRTSIAYGAHPDVRNTGRKPDDRMESFFLAETFKYLYLIQDPDQ 597
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S2A036_TRICV (alpha-1,2-Mannosidase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A036_TRICV)

HSP 1 Score: 71.6 bits (174), Expect = 8.720e-14
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            A E++C+   A+GS PNVN+ +R  +D+MESFFLAETLKYLYL+QDPD
Sbjct:   33 AIERYCKTDFAYGSPPNVNNVNRDVDDKMESFFLAETLKYLYLLQDPD 80
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7R9VYC4_9STRA (alpha-1,2-Mannosidase n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VYC4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 1.120e-13
Identity = 29/50 (58.00%), Postives = 41/50 (82.00%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPDQK 50
            + +++C++ VA+GS  +VN P  +P D+MESFFLAETLKYLYL+QDPD +
Sbjct:   43 SIQRYCKMDVAYGSIRDVNRPEERPTDKMESFFLAETLKYLYLLQDPDSE 92
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S0AP19_9STRA (alpha-1,2-Mannosidase n=2 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AP19_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 3.990e-13
Identity = 29/48 (60.42%), Postives = 41/48 (85.42%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            + E++C+  +A+GS  +V + ++QPEDRMESFFLAET+KYLYL+QDPD
Sbjct:  112 SIERYCKTKIAYGSLKDVRNTNQQPEDRMESFFLAETIKYLYLLQDPD 159
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S2KLB8_9STRA (alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KLB8_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.010e-13
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            AFEKH R    + S PNVN   R+P+D+MESFF+AETLKYLYL+QDPD
Sbjct:  401 AFEKHSRTSAGYASIPNVNSVFREPKDQMESFFIAETLKYLYLLQDPD 448
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S4N8K7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N8K7_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.080e-13
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            + E++CR  +A+GS  NVN+P   PEDRMESFFLAET+KYLYL+ DPD
Sbjct:  449 SIERYCRTDIAYGSLTNVNNPGAAPEDRMESFFLAETIKYLYLLFDPD 496
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S4K3S5_9STRA (alpha-1,2-Mannosidase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K3S5_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 7.630e-13
Identity = 31/48 (64.58%), Postives = 40/48 (83.33%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            + E++CR  +A+GS  NVN P+ +P D+MESFFLAETLKYLYL+QDPD
Sbjct:  487 SIERYCRTDIAYGSLQNVNKPNDRPMDKMESFFLAETLKYLYLLQDPD 534
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A7S2PJG9_9STRA (alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PJG9_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.560e-12
Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPDQK 50
            + EK+C+    +GS  +VN+PS +PEDRMESFFLAETLKYLYL+ DPD +
Sbjct:  669 SIEKYCKTEYGYGSLHDVNEPSMKPEDRMESFFLAETLKYLYLLFDPDSE 718
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BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Match: A0A6U2WRQ7_9STRA (alpha-1,2-Mannosidase n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A6U2WRQ7_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 8.360e-12
Identity = 30/48 (62.50%), Postives = 39/48 (81.25%), Query Frame = 0 
Query:    1 AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPD 48
            A EK+C+  +A+GS  NV D + +P ++MESFFLAETLKYLYL+QDPD
Sbjct:  251 AIEKYCKTHIAYGSLGNVQDTNGKPRNKMESFFLAETLKYLYLLQDPD 298
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1309.1878.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGK4_ECTSI2.550e-6289.92alpha-1,2-Mannosidase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S3XK61_HETAK6.890e-1569.39alpha-1,2-Mannosidase n=1 Tax=Heterosigma akashiwo... [more]
A0A7S2A036_TRICV8.720e-1464.58alpha-1,2-Mannosidase n=1 Tax=Trieres chinensis Ta... [more]
A0A7R9VYC4_9STRA1.120e-1358.00alpha-1,2-Mannosidase n=1 Tax=Pseudictyota dubia T... [more]
A0A7S0AP19_9STRA3.990e-1360.42alpha-1,2-Mannosidase n=2 Tax=Minutocellus polymor... [more]
A0A7S2KLB8_9STRA7.010e-1366.67alpha-1,2-Mannosidase n=1 Tax=Leptocylindrus danic... [more]
A0A7S4N8K7_9STRA7.080e-1364.58alpha-1,2-Mannosidase n=1 Tax=Odontella aurita Tax... [more]
A0A7S4K3S5_9STRA7.630e-1364.58alpha-1,2-Mannosidase n=1 Tax=Odontella aurita Tax... [more]
A0A7S2PJG9_9STRA2.560e-1262.00alpha-1,2-Mannosidase n=2 Tax=Skeletonema marinoi ... [more]
A0A6U2WRQ7_9STRA8.360e-1262.50alpha-1,2-Mannosidase n=1 Tax=Amphiprora paludosa ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001382Glycoside hydrolase family 47PFAMPF01532Glyco_hydro_47coord: 1..50
e-value: 2.0E-14
score: 53.3
IPR012341Six-hairpin glycosidase-like superfamilyGENE3D1.50.10.10coord: 1..63
e-value: 5.8E-15
score: 56.8
NoneNo IPR availablePANTHERPTHR11742MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATEDcoord: 1..49
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 74..124
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..73
IPR036026Seven-hairpin glycosidasesSUPERFAMILY48225Seven-hairpin glycosidasescoord: 1..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1309contigE-siliculosus-1a_F_contig1309:26369..27769 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1309.1878.1mRNA_E-siliculosus-1a_F_contig1309.1878.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1309 26369..27769 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1309.1878.1 ID=prot_E-siliculosus-1a_F_contig1309.1878.1|Name=mRNA_E-siliculosus-1a_F_contig1309.1878.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=125bp
AFEKHCRLPVAFGSFPNVNDPSRQPEDRMESFFLAETLKYLYLIQDPDQK
SVRVVLSVSRVVCGVASTLAIIIRRLTIRFEGLLCLFRLRLGAIKFRTCP
MRDGLARLTPSISDIPRSGRALLR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036026Seven-hairpin_glycosidases
IPR0123416hp_glycosidase-like_sf
IPR001382Glyco_hydro_47