prot_E-siliculosus-1a_F_contig1308.1872.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1308.1872.1
Unique Nameprot_E-siliculosus-1a_F_contig1308.1872.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length368
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1308.1872.1 vs. uniprot
Match: D7FIC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC8_ECTSI)

HSP 1 Score: 519 bits (1336), Expect = 6.420e-183
Identity = 263/303 (86.80%), Postives = 276/303 (91.09%), Query Frame = 0 
Query:   27 MGVEDGQQGDRDDRQSGPYCQVTIRTLRARTSGAAFISSSEATTDQGEGDVLLFVERELLVRSYNSVSLSDDGAYSLTLSDCYGFTPTTMSAPARRVSSASWRSRNHDGADAERCGRQTAEIVRLLFLPLPSSMEFEVNSGQATRGGAVIGNFHLLPVAHVPQLQHAPVFSSETTTTSPFIRTVGHADYTPGVPVLHEPSRAYFTSATAAA-DSFCDRGEMDCTGEGPGVDEGTALSSIGGGFAGGIAVGVVFSLLLVLTVFRGGWGKDFLEHFWTLIKGDGDAGMRKSGWRGFIVSIGGEKK 328
            MGVED QQ  RDDRQ GPYCQV IRTLRARTSGAAFISSSEATTDQGEG  LLFVERELLVRSYNSVSLSDDG YSLTLSDCYGF P T S+PARRVSSASWRSRNHDGADA R  RQTAEIVR+LFLPLPSSMEF VNSGQAT  G VIGNFHLLPVAHVPQLQHAPVF++ETTTTSP IRTVGHA YTPGVPVLHEPSRAYF+S TAAA DS C+RGEM C GEGPGVDEGTALSS+GGGFAGG+AVGVVFSLLLVL +FRGG GKDF+E+FWTL+KGDGDAGMRKSGWRGFIVS+GGEKK
Sbjct:    1 MGVEDDQQAARDDRQRGPYCQVAIRTLRARTSGAAFISSSEATTDQGEGGDLLFVERELLVRSYNSVSLSDDGTYSLTLSDCYGFMPITTSSPARRVSSASWRSRNHDGADAGRRERQTAEIVRILFLPLPSSMEFVVNSGQATSSGTVIGNFHLLPVAHVPQLQHAPVFNAETTTTSPDIRTVGHAAYTPGVPVLHEPSRAYFSSTTAAAADSLCERGEMGCIGEGPGVDEGTALSSVGGGFAGGVAVGVVFSLLLVLIIFRGGRGKDFMENFWTLLKGDGDAGMRKSGWRGFIVSVGGEKK 303
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BLAST of mRNA_E-siliculosus-1a_F_contig1308.1872.1 vs. uniprot
Match: A0A6H5JS72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS72_9PHAE)

HSP 1 Score: 496 bits (1277), Expect = 7.380e-173
Identity = 256/328 (78.05%), Postives = 274/328 (83.54%), Query Frame = 0 
Query:    1 MPATSVATGGASRVFSATWPPYTPASMGVEDGQQGDRDDRQSGPYCQVTIRTLRARTSGAAFISSSEATTDQGEGDVLLFVERELLVRSYNSVSLSDDGAYSLTLSDCYGFTPTTMSAPARRVSSASWRSRNHDGADAERCGRQTAEIVRLLFLPLPSSMEFEVNSGQATRGGAVIGNFHLLPVAHVPQLQHAPVFSSETTTTSPFIRTVGHADYTPGVPVLHEPSRAYFTSATAAADSFCDRGEMDCTGEGPGVDEGTALSSIGGGFAGGIAVGVVFSLLLVLTVFRGGWGKDFLEHFWTLIKGDGDAGMRKSGWRGFIVSIGGEKK 328
            MPATSVATGGASRVF+ATWPPYTPAS   ED QQ DRDDR+SGPYCQV IRTLRARTSGAAFISSSEATT  GEG  LLFV+  LL+RSYNSVSLSDDGAYSLTLSDC+GF P   S+P R  SS  WRSRNHDG  A R   Q AEI RLLFLPLPSS++FEVN  QAT  GA+IGNFHLLPVAHVPQLQHAPVF++ET+TTSP IRTVGHADYTPGVPVL E SRAYF+SA AAAD+ CDR +M CTGEGPGV EGTA SSIGGGF          SLLLVL VFRGGWGKDFLE+FWTL+KGDGDAGM+KSGW GFIVSIGGEKK
Sbjct:   31 MPATSVATGGASRVFTATWPPYTPASTRGEDHQQADRDDRESGPYCQVAIRTLRARTSGAAFISSSEATTGHGEGGDLLFVQPGLLLRSYNSVSLSDDGAYSLTLSDCHGFIPIATSSPDRPASSPPWRSRNHDGGAAGRPEWQMAEIGRLLFLPLPSSIDFEVNRRQATSSGAIIGNFHLLPVAHVPQLQHAPVFNTETSTTSPGIRTVGHADYTPGVPVLQESSRAYFSSAMAAADTLCDREKMACTGEGPGVGEGTAPSSIGGGFTXXXXXXXXXSLLLVLVVFRGGWGKDFLENFWTLLKGDGDAGMKKSGWGGFIVSIGGEKK 358
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIC8_ECTSI6.420e-18386.80Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JS72_9PHAE7.380e-17378.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..287
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 288..367
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..267
NoneNo IPR availableTMHMMTMhelixcoord: 264..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1308contigE-siliculosus-1a_F_contig1308:20064..22965 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1308.1872.1mRNA_E-siliculosus-1a_F_contig1308.1872.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1308 20064..22965 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1308.1872.1 ID=prot_E-siliculosus-1a_F_contig1308.1872.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1872.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=368bp
MPATSVATGGASRVFSATWPPYTPASMGVEDGQQGDRDDRQSGPYCQVTI
RTLRARTSGAAFISSSEATTDQGEGDVLLFVERELLVRSYNSVSLSDDGA
YSLTLSDCYGFTPTTMSAPARRVSSASWRSRNHDGADAERCGRQTAEIVR
LLFLPLPSSMEFEVNSGQATRGGAVIGNFHLLPVAHVPQLQHAPVFSSET
TTTSPFIRTVGHADYTPGVPVLHEPSRAYFTSATAAADSFCDRGEMDCTG
EGPGVDEGTALSSIGGGFAGGIAVGVVFSLLLVLTVFRGGWGKDFLEHFW
TLIKGDGDAGMRKSGWRGFIVSIGGEKKVSSCQSFEHTKMKAEIPPPYPP
QNPSIIPVSTRPVRFWT*
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