prot_E-siliculosus-1a_F_contig1308.1870.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1308.1870.1
Unique Nameprot_E-siliculosus-1a_F_contig1308.1870.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length436
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1870.1 vs. uniprot
Match: A0A6H5L7Q1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Q1_9PHAE)

HSP 1 Score: 621 bits (1601), Expect = 1.310e-220
Identity = 359/435 (82.53%), Postives = 375/435 (86.21%), Query Frame = 0
Query:    1 MATWSSICSLVALCAAVGCFRLLLILSRHVSLLAGAASNVLDNNESKRGRKRMRGLSLTETRPRSAGVHQTRSRVDPQGSVFSGRFEKVWLAFDSLLDRVAVVENDANVENDASLLKGKLSTAIEDAVAGGIAAAEQKMALAFQAKMAQAVTNEMGKWRVMQEDREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRKCAATVDSVHDDVLQLKEQAADNAAGKAADDSAARETAAMANLLRSIHATHQRQQEAVVAVQQEVRECLARRKVEEASSASRGDRPSAAAEASPRPPSMDDTTKLRNVKSDLDSLGARLLALENAGNGLVNPRKLNRTLHKVHESVLESIRVWGEEPLVGPVYTEWVLRKFKKNSSKTGPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASNDCMSGGGEGGQGRAPST 435
            MATWS ICSLVALCAAVGCFRLLLILSRHVSLLAGAASN LDNNE K GRKRMRG  L ETR RS G HQ+RSRVDPQGSVFS RFEKVW+AFD LLDRVAVVE+DAN++NDA+L KGKLS ++EDAVA GIAAAEQKMALAFQAKMAQAV NE GKWRVMQE REAWWQRKFDLEENKLGTALAAAVASHEDAM AR+RKC ATVDSV  DVLQLKEQAA NAA KAADD++ARE AAMA+LLR+I+ATHQ QQEAVVAVQQEVRECLARRKVEEASSASRGD  SAAAEASPRPPSMDDTTKLRNVKSDLDSLGARLLALENAGNGLV+PRKLNRTLHKVHESVLESIRVWGEEPLVGPVYTEWVLRK KKNSSK GPG                          XXXXXXXX   DCM GGGEGGQGRAPS+
Sbjct:    1 MATWSIICSLVALCAAVGCFRLLLILSRHVSLLAGAASNALDNNERKSGRKRMRG-HLPETRRRSTGAHQSRSRVDPQGSVFSSRFEKVWVAFDRLLDRVAVVEHDANLDNDANLSKGKLSASMEDAVAAGIAAAEQKMALAFQAKMAQAVMNETGKWRVMQESREAWWQRKFDLEENKLGTALAAAVASHEDAMEARERKCTATVDSVRADVLQLKEQAAGNAARKAADDASAREKAAMADLLRAINATHQMQQEAVVAVQQEVRECLARRKVEEASSASRGDPLSAAAEASPRPPSMDDTTKLRNVKSDLDSLGARLLALENAGNGLVSPRKLNRTLHKVHESVLESIRVWGEEPLVGPVYTEWVLRKLKKNSSKIGPGSGDEGDEKTTPREKSEGGSGKGGSTTXXXXXXXXXXXDCMPGGGEGGQGRAPSS 434          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1870.1 vs. uniprot
Match: D7FID0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FID0_ECTSI)

HSP 1 Score: 510 bits (1313), Expect = 3.070e-175
Identity = 289/329 (87.84%), Postives = 298/329 (90.58%), Query Frame = 0
Query:    1 MATWSSICSLVALCAAVGCFRLLLILSRHVSLLAGAASNVLDNNESKRGRKRMRGLSLTETRPRSAGVHQTRSRVDPQGSVFSGRFEKVWLAFDSLLDRVAVVENDANVENDASLLKGKLSTAIEDAVAGGIAAAEQKMALAFQAKMAQAVTNEMGKWRVMQEDREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRKCAATVDSVHDDVLQLKEQAADNAAGKAADDSAARETAAMANLLRSIHATHQRQQEAVVAVQQEVRECLARRKVEEASSASRGDRPSAAAEASPRPPSMDDTTKLRNVKSDLDSLGARLLALENAGNGL 329
            M  WS ICS+VALCAAVGCFRLLLILSRHVSLL GAAS VLDNNESKRGRKRMR LSLT TRPRSAG HQTRSRVDPQGSVFSG+FEK+WLAFD+LL RVAVVENDANVENDA+LLKG LS AIEDAVAGGIAAAEQKMALAFQAKMAQAV NEMGK RVMQE REAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRK AAT +SV DDVLQLKEQAADNAAGK          AA ANLLRSI ATHQRQQEAV+A+QQEVRECLARRKVEE SSASRGDRPS AAEASPRPPSM+DTTKLRNVKSDLDSLGARLLALENAGNGL
Sbjct:    1 MTPWSGICSMVALCAAVGCFRLLLILSRHVSLLVGAASKVLDNNESKRGRKRMRDLSLTGTRPRSAGAHQTRSRVDPQGSVFSGKFEKIWLAFDNLLHRVAVVENDANVENDANLLKGNLSAAIEDAVAGGIAAAEQKMALAFQAKMAQAVVNEMGKRRVMQEGREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRKYAATFNSVRDDVLQLKEQAADNAAGKXXXXXXXXXKAATANLLRSISATHQRQQEAVMALQQEVRECLARRKVEEVSSASRGDRPSVAAEASPRPPSMEDTTKLRNVKSDLDSLGARLLALENAGNGL 329          
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1870.1 vs. uniprot
Match: A0A6H5JRQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRQ2_9PHAE)

HSP 1 Score: 265 bits (678), Expect = 5.200e-81
Identity = 188/377 (49.87%), Postives = 238/377 (63.13%), Query Frame = 0
Query:    1 MATWSSICSLVALCAAVGCFRLLLILSRHVSLLA-----GAASNVLDNNESKRGRKRMRGLSLTETRPRSAG-VHQTR--SRVDPQGSVFSGRFEKVWLAFDSLLDRV-AVVENDANVENDASLLKGKLSTAIEDAVAGGIAAAEQKMALAFQAKMAQAVTNEMGKWRVMQEDREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQRKCAATVDSVHDDVLQLKEQAADNA-AGKAADDSAARETAAMANLLRSIHATHQRQQEAVVAVQQEVRECLARRKVEEASSASRGDRPSAAAEASPRPPSMDDTTKLRNVKSDLDSLGARLLALENAGNGLVNPRKLNRTLHKVHESVLESIRVWGEEPLVGPVYTEWV 367
            MA+WS ICS+VA CAA+GCF LL  LSR + LLA     G    + D  ESKR   R     +  T PRS G  H TR  +R + QG+    RFEKV LAFD L D   A VEND     D     G L+ AI+D VA GIAA+E KM LAFQ+++ QA+  +MG  + M+  REAWW+RK D  E++LG ALAAAVAS E  MA R+ KCAATV +V DDVL+LKEQA DN  AG+A D +AA+E AA+A L RSI    ++  E V  VQ+E++EC A  +    ++A  GD    A  A   P S+D T KL NVKSD+D LG+RLL +ENA        +++   ++VHESV+ES RVWG EPLV P+YT+W+
Sbjct:    1 MASWSGICSVVAPCAALGCFWLLFTLSRRLILLAEAVLDGGVDRLFDK-ESKRRCGRDHDPGVDGTSPRSVGGAHPTRPGNRANSQGADGDRRFEKVRLAFDGLFDGGGAGVEND-----DVDRFMGLLTAAIDDVVAAGIAASEAKMGLAFQSQITQALEEKMGTAQAMERHREAWWKRKLDGMESRLGRALAAAVASQEGTMAIREEKCAATVAAVCDDVLRLKEQATDNTVAGEATDGAAAKEKAAVAELTRSIAEKQEKMNERVAKVQREMQECFAEGRP---AAAPCGD---GAGAAMVSPSSVDHTAKLNNVKSDIDYLGSRLLIVENAA---YEADEMHGIFYRVHESVVESTRVWGTEPLVAPLYTDWL 362          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1308.1870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L7Q1_9PHAE1.310e-22082.53Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FID0_ECTSI3.070e-17587.84Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JRQ2_9PHAE5.200e-8149.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 305..325
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..435
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 27..36
NoneNo IPR availableTMHMMTMhelixcoord: 7..25
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 254..283
score: 6.705

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1308contigE-siliculosus-1a_F_contig1308:7848..9155 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1308.1870.1mRNA_E-siliculosus-1a_F_contig1308.1870.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1308 7848..9155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1308.1870.1 ID=prot_E-siliculosus-1a_F_contig1308.1870.1|Name=mRNA_E-siliculosus-1a_F_contig1308.1870.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=436bp
MATWSSICSLVALCAAVGCFRLLLILSRHVSLLAGAASNVLDNNESKRGR
KRMRGLSLTETRPRSAGVHQTRSRVDPQGSVFSGRFEKVWLAFDSLLDRV
AVVENDANVENDASLLKGKLSTAIEDAVAGGIAAAEQKMALAFQAKMAQA
VTNEMGKWRVMQEDREAWWQRKFDLEENKLGTALAAAVASHEDAMAARQR
KCAATVDSVHDDVLQLKEQAADNAAGKAADDSAARETAAMANLLRSIHAT
HQRQQEAVVAVQQEVRECLARRKVEEASSASRGDRPSAAAEASPRPPSMD
DTTKLRNVKSDLDSLGARLLALENAGNGLVNPRKLNRTLHKVHESVLESI
RVWGEEPLVGPVYTEWVLRKFKKNSSKTGPGAGGEGDDNTTPRKKSEGES
GKGSSTTEEGEGDGSASNDCMSGGGEGGQGRAPST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS