prot_E-siliculosus-1a_F_contig1297.1801.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1297.1801.1
Unique Nameprot_E-siliculosus-1a_F_contig1297.1801.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length91
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1297.1801.1 vs. uniprot
Match: A0A6H5L838_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L838_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 3.170e-52
Identity = 84/90 (93.33%), Postives = 85/90 (94.44%), Query Frame = 0 
Query:    1 MVWGSLPPRVTRVAMRAGLCCARTGLRRSGGRYAKRGGFLSTATKVPLPDITFGVESEPALPLLGDLPLLQISQSLACPEPEGDDDGDGR 90
            MVWGSLPPRVTRVAM+AGL CARTG RRSGGRYAKRGGFLSTA KVPLPDITF VESEPALPLLGDLPLL ISQSLACPEPEGDDDGDGR
Sbjct:    1 MVWGSLPPRVTRVAMQAGLRCARTGSRRSGGRYAKRGGFLSTAAKVPLPDITFDVESEPALPLLGDLPLLLISQSLACPEPEGDDDGDGR 90
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BLAST of mRNA_E-siliculosus-1a_F_contig1297.1801.1 vs. uniprot
Match: D7FMH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMH9_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 5.690e-8
Identity = 27/31 (87.10%), Postives = 28/31 (90.32%), Query Frame = 0 
Query:   15 MRAGLCCARTGLRRSGGRYAKRGGFLSTATK 45
            M+AGL CARTG RRSGGRYAKRGGFLSTA K
Sbjct:    1 MQAGLRCARTGSRRSGGRYAKRGGFLSTAAK 31
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1297.1801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L838_9PHAE3.170e-5293.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMH9_ECTSI5.690e-887.10Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1297contigE-siliculosus-1a_F_contig1297:15231..17838 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1297.1801.1mRNA_E-siliculosus-1a_F_contig1297.1801.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1297 15159..18527 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1297.1801.1 ID=prot_E-siliculosus-1a_F_contig1297.1801.1|Name=mRNA_E-siliculosus-1a_F_contig1297.1801.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=91bp
MVWGSLPPRVTRVAMRAGLCCARTGLRRSGGRYAKRGGFLSTATKVPLPD
ITFGVESEPALPLLGDLPLLQISQSLACPEPEGDDDGDGR*
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