prot_E-siliculosus-1a_F_contig12927.1785.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12927.1785.1
Unique Nameprot_E-siliculosus-1a_F_contig12927.1785.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length186
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12927.1785.1 vs. uniprot
Match: D7FH19_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH19_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 7.020e-18
Identity = 60/172 (34.88%), Postives = 97/172 (56.40%), Query Frame = 0 
Query:    7 PEPSLAKALEQTRTVIDDRRPWYEALVLRTQAARANAGDTSVATVSEIVDGFSFLVNAVNVDLLKPVCFGLQELFAAVQGATAAREELIDLLGYCVSITSIVLNHALLADLPEHVKRALMDVEAEIKAINGNARLFDAKT-GCSLPCRRLRLHAKDREEIQEHKVRLQEILD 177
            P  S  +AL +    ++   PW+E L LR Q      GD +V T+    +  S L+NA N  +L PV   L+ L  AVQGA AAREE+++L  YCV+++  +L+ A    +PE +K  L + + E++A+    + +  ++ GC    RR+ L+A DR+    HK +L+++LD
Sbjct:   32 PVRSQREALAEAARRMEAETPWFEKLGLRYQDVADGGGDLTVETILAF-NVASGLINAANETVLAPVFVVLKGLLGAVQGAAAAREEIVELARYCVAMSRCLLDAAKADVMPETIKSTLEEFKGEMEAVGRFVQTYGTRSSGCCW--RRMVLNAHDRDTAAGHKRKLKDLLD 200
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12927.1785.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FH19_ECTSI7.020e-1834.88NB-ARC and TPR repeat-containing protein n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12927contigE-siliculosus-1a_F_contig12927:147..1370 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12927.1785.1mRNA_E-siliculosus-1a_F_contig12927.1785.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12927 147..1397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12927.1785.1 ID=prot_E-siliculosus-1a_F_contig12927.1785.1|Name=mRNA_E-siliculosus-1a_F_contig12927.1785.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=186bp
MDNTLLPEPSLAKALEQTRTVIDDRRPWYEALVLRTQAARANAGDTSVAT
VSEIVDGFSFLVNAVNVDLLKPVCFGLQELFAAVQGATAAREELIDLLGY
CVSITSIVLNHALLADLPEHVKRALMDVEAEIKAINGNARLFDAKTGCSL
PCRRLRLHAKDREEIQEHKVRLQEILDLATTAAVFD
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