prot_E-siliculosus-1a_F_contig12905.1774.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12905.1774.1
Unique Nameprot_E-siliculosus-1a_F_contig12905.1774.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length96
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5JLK3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLK3_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 5.060e-52
Identity = 86/111 (77.48%), Postives = 91/111 (81.98%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKV LLWDNCPGH+IKNDDPQIVIIFLPPNV SVFQPMDMG+LFALK QYKTEMVMRLAALIEDWDT R               Q TMLDVTE+LSQKWESFSDQT++RCW
Sbjct:  164 KKVALLWDNCPGHRIKNDDPQIVIIFLPPNVMSVFQPMDMGILFALKCQYKTEMVMRLAALIEDWDTARARQIRTGCRGLNDAGQPTMLDVTEVLSQKWESFSDQTVIRCW 274          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5JEY2_9PHAE (HTH CENPB-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEY2_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 6.510e-49
Identity = 84/111 (75.68%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VR               QATMLDVTEILS+KWESFS QT++RCW
Sbjct:  241 KKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCW 351          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5JV64_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV64_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 3.300e-48
Identity = 84/111 (75.68%), Postives = 90/111 (81.08%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKVVLLWDNCPGHKIKNDDPQI+IIFLPPNVTSVFQPMDMG+LFALK QYKTEMV RLA LI+ WD VR               QATMLDVTEILS+KWESFS QT++RCW
Sbjct:  446 KKVVLLWDNCPGHKIKNDDPQIIIIFLPPNVTSVFQPMDMGILFALKCQYKTEMVARLADLIDVWDAVRARKIRRGCRGLNDAGQATMLDVTEILSEKWESFSSQTVIRCW 556          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5KII5_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII5_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 4.360e-46
Identity = 78/111 (70.27%), Postives = 87/111 (78.38%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            +KV L+WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LK  YKTEMV+RL+ +IEDWDTVR               QATMLDV E+L+QKWESFSDQT+VRCW
Sbjct:  187 RKVALIWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGGLFTLKCHYKTEMVVRLSGVIEDWDTVRARNIPTGCRGLSDAGQATMLDVAEVLTQKWESFSDQTVVRCW 297          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5KIE7_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIE7_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 5.440e-45
Identity = 77/111 (69.37%), Postives = 85/111 (76.58%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKV LLWDNCPGHKIK++DPQIVIIFLPP +TSV+QPMDMG+LF LK +YKTEMV RLA LIEDWDTVR               QATMLDVTEI SQKW SF  QT++ CW
Sbjct:   75 KKVALLWDNCPGHKIKSNDPQIVIIFLPPEITSVYQPMDMGILFVLKCRYKTEMVARLADLIEDWDTVRARKFQRGCQGLSDAGQATMLDVTEIGSQKWRSFDVQTVITCW 185          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5JNS8_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS8_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 9.140e-45
Identity = 79/111 (71.17%), Postives = 86/111 (77.48%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKV LLWDNCPGHKIK++DPQIVIIFLPPNV SV+QPM+MG+LF LK QYKTEMV RLA LIEDWDTVR               QATMLDVTEI SQKW SF  QT++RCW
Sbjct:  278 KKVALLWDNCPGHKIKSNDPQIVIIFLPPNVNSVYQPMNMGILFVLKCQYKTEMVARLADLIEDWDTVRARKIQRGCRGLSDAGQATMLDVTEICSQKWRSFDVQTVIRCW 388          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5KFG9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFG9_9PHAE)

HSP 1 Score: 154 bits (388), Expect = 4.310e-43
Identity = 77/111 (69.37%), Postives = 84/111 (75.68%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            +KV L WDNCPGHKI N+DPQIVIIFLPP VTSVFQPMDMG LF LK Q K EMV+RL+ +IEDWDTVR               QAT LDV EIL+QKWESFSDQT+VRCW
Sbjct:  231 RKVTLTWDNCPGHKIINNDPQIVIIFLPPLVTSVFQPMDMGALFTLKCQNKPEMVVRLSDVIEDWDTVRARNIPRGCQGLSDAGQATTLDVAEILTQKWESFSDQTVVRCW 341          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5KA74_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA74_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.990e-42
Identity = 74/96 (77.08%), Postives = 82/96 (85.42%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVRQATMLDVTEILSQKWESFSDQTIVRCW 96
            KK+ LLWDNCPGH+IKNDDPQIVIIFLPPNVTSVFQPMDMG+LFALK QYKT+M+MR        +   Q TMLDVTEILSQKWESFSDQT++RCW
Sbjct:  527 KKMALLWDNCPGHRIKNDDPQIVIIFLPPNVTSVFQPMDMGILFALKCQYKTKMLMR------GLNDAGQPTMLDVTEILSQKWESFSDQTVIRCW 616          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5JEK6_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK6_9PHAE)

HSP 1 Score: 149 bits (377), Expect = 1.500e-40
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVR---------------QATMLDVTEILSQKWESFSDQTIVRCW 96
            KKV LLWDNCPGHKI ++DPQI I+FLPPNV SV+QPMDMG+LF LK QY+ E + RLA LIEDWDTVR               QAT+LDVTEI SQKW SF  QT++RCW
Sbjct:  414 KKVALLWDNCPGHKINSNDPQIFIMFLPPNVISVYQPMDMGILFVLKCQYRNEKMARLADLIEDWDTVRARKIQRGCQGFSDAGQATVLDVTEICSQKWRSFDVQTVIRCW 524          
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Match: A0A6H5K0Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Y4_9PHAE)

HSP 1 Score: 147 bits (370), Expect = 2.030e-39
Identity = 69/96 (71.88%), Postives = 78/96 (81.25%), Query Frame = 0
Query:    1 KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQYKTEMVMRLAALIEDWDTVRQATMLDVTEILSQKWESFSDQTIVRCW 96
            ++V  LWDNCPGHKIK++DP IVI FLPP V SV+QPMDM +LF LK QYKTEMV RLA L+EDWDT   ATMLDVTEI SQKW SF  QT++RCW
Sbjct:  355 RQVAFLWDNCPGHKIKSNDPHIVINFLPPYVNSVYQPMDMSILFVLKCQYKTEMVARLADLMEDWDT---ATMLDVTEICSQKWRSFDVQTVIRCW 447          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12905.1774.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JLK3_9PHAE5.060e-5277.48HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JEY2_9PHAE6.510e-4975.68HTH CENPB-type domain-containing protein n=2 Tax=E... [more]
A0A6H5JV64_9PHAE3.300e-4875.68HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KII5_9PHAE4.360e-4670.27HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KIE7_9PHAE5.440e-4569.37DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JNS8_9PHAE9.140e-4571.17HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KFG9_9PHAE4.310e-4369.37HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KA74_9PHAE1.990e-4277.08HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5JEK6_9PHAE1.500e-4064.86DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K0Y4_9PHAE2.030e-3971.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 1..96
e-value: 1.6E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR19303:SF20TIGGER TRANSPOSABLE ELEMENT-DERIVED PROTEIN 6coord: 1..96
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 1..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12905contigE-siliculosus-1a_F_contig12905:5..631 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12905.1774.1mRNA_E-siliculosus-1a_F_contig12905.1774.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12905 5..631 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12905.1774.1 ID=prot_E-siliculosus-1a_F_contig12905.1774.1|Name=mRNA_E-siliculosus-1a_F_contig12905.1774.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=96bp
KKVVLLWDNCPGHKIKNDDPQIVIIFLPPNVTSVFQPMDMGVLFALKSQY
KTEMVMRLAALIEDWDTVRQATMLDVTEILSQKWESFSDQTIVRCW
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom