prot_E-siliculosus-1a_F_contig1288.1758.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1288.1758.1
Unique Nameprot_E-siliculosus-1a_F_contig1288.1758.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length333
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1288.1758.1 vs. uniprot
Match: D7G1Q7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q7_ECTSI)

HSP 1 Score: 473 bits (1217), Expect = 1.760e-165
Identity = 286/332 (86.14%), Postives = 293/332 (88.25%), Query Frame = 0 
Query:    1 TTDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLQAYQVKQMAQQLHHGTTQQTDAXXXXXXXXRLAESAAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLLEKAKRERKSHDGRVQRLEKSIATSNARAVELDKELQLQRRSFTRVLKSDRDAYEARTEAAEANAERRGRELKRLMTWVEKAESKYAEALRKLSAQAEDLGAANLGDLEGFAKDMSEQVSKLRQGVADSMRSRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRKTGSKGDGVSVTDPDASKASSDGGERQDRGHVDDDSLERPMAKV 332
            T DSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLQAYQVKQMAQQLHHG +Q+TD         R AE AAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLLEKAKRERKSHDG+VQRLEKSIATSN RAVELDKELQLQR+SFTRVLKSDRD YE RTEAAEANAERRGRELKRLMTWVEKAESK+AEALRKLSAQAEDLGAANLGDLEGFAKDMSE VSKLRQGVADSMRSR XXXXXXXXXXXXXXXXX                 TRKTGSKGDG SVTD D SKA SDGGERQD+GHVDD+SLERPMAKV
Sbjct:    7 TIDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLQAYQVKQMAQQLHHGHSQETDVHEQQQQQ-RFAEGAAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLLEKAKRERKSHDGKVQRLEKSIATSNTRAVELDKELQLQRKSFTRVLKSDRDVYETRTEAAEANAERRGRELKRLMTWVEKAESKFAEALRKLSAQAEDLGAANLGDLEGFAKDMSEDVSKLRQGVADSMRSRXXXXXXXXXXXXXXXXXXENDKGKAKEKTKKTK--TRKTGSKGDGASVTDADDSKARSDGGERQDKGHVDDNSLERPMAKV 335
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BLAST of mRNA_E-siliculosus-1a_F_contig1288.1758.1 vs. uniprot
Match: A0A6H5L251_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L251_9PHAE)

HSP 1 Score: 404 bits (1039), Expect = 9.090e-139
Identity = 225/252 (89.29%), Postives = 234/252 (92.86%), Query Frame = 0 
Query:    1 TTDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLQAYQVKQMAQQLHHGTTQQTDAXXXXXXXXRLAESAAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLLEKAKRERKSHDGRVQRLEKSIATSNARAVELDKELQLQRRSFTRVLKSDRDAYEARTEAAEANAERRGRELKRLMTWVEKAESKYAEALRKLSAQAEDLGAANLGDLEGFAKDMSEQVSKLRQGVADSMRSRS 252
            TTDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANL AYQV+QMAQQLHHG T++TD         RLAESAAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLL+KAKRERKSHDG+VQRLEKSIATSNARAVEL      QRRSFTRVLKSDRD YEARTEAAEANAERRG+ELKRLMTWVEKAESKYAEALRKLSAQA+DLGAANLGDLEGFAKDMSE+VSKLRQGVADS+RSRS
Sbjct:   39 TTDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLPAYQVQQMAQQLHHGPTEETDVHLQQQQ--RLAESAAPLEVRHLHGILQWLHQAKADMVENDRSKVQLEGDVRLLYNLLQKAKRERKSHDGKVQRLEKSIATSNARAVEL------QRRSFTRVLKSDRDVYEARTEAAEANAERRGQELKRLMTWVEKAESKYAEALRKLSAQADDLGAANLGDLEGFAKDMSEEVSKLRQGVADSVRSRS 282
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1288.1758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1Q7_ECTSI1.760e-16586.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L251_9PHAE9.090e-13989.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 197..217
NoneNo IPR availableCOILSCoilCoilcoord: 105..153
NoneNo IPR availableCOILSCoilCoilcoord: 10..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1288contigE-siliculosus-1a_F_contig1288:504..4148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1288.1758.1mRNA_E-siliculosus-1a_F_contig1288.1758.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1288 504..4148 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1288.1758.1 ID=prot_E-siliculosus-1a_F_contig1288.1758.1|Name=mRNA_E-siliculosus-1a_F_contig1288.1758.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=333bp
TTDSDERTELDALRLENDTLRRHLGRLEDKVQRAEESANLQAYQVKQMAQ
QLHHGTTQQTDAHQQQQQQQRLAESAAPLEVRHLHGILQWLHQAKADMVE
NDRSKVQLEGDVRLLYNLLEKAKRERKSHDGRVQRLEKSIATSNARAVEL
DKELQLQRRSFTRVLKSDRDAYEARTEAAEANAERRGRELKRLMTWVEKA
ESKYAEALRKLSAQAEDLGAANLGDLEGFAKDMSEQVSKLRQGVADSMRS
RSRSRSKSKGRSCGREEGTQEGHDKGKDKEKKKKNKTRKTGSKGDGVSVT
DPDASKASSDGGERQDRGHVDDDSLERPMAKV*
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