prot_E-siliculosus-1a_F_contig1286.1748.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1286.1748.1
Unique Nameprot_E-siliculosus-1a_F_contig1286.1748.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length415
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1286.1748.1 vs. uniprot
Match: D7G366_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G366_ECTSI)

HSP 1 Score: 735 bits (1897), Expect = 1.820e-266
Identity = 372/414 (89.86%), Postives = 386/414 (93.24%), Query Frame = 0 
Query:    1 MASTMDGFTRTWRCLDRLNVEDELVQDLTNPNFVLRNVDLAFSCCGQTRAVEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMAFGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENVIQARVDIARLDVMETMGNRVLPAAGPTSRAGQAERSNGIRDQCDGDAVKGDSDDWGCGDIATWRAVHERAAWHFIPDARAVGQIVDTIEYFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRATLPQILSSPGKARCEHRFNQPAAPNLQMKEGGDKAGGERWTPQSNWPPPDLVLMEDVYEQMLRVPYGDAVRESGYQSEL 414
            MASTMDGFTRTWRC+DRLNVEDELVQDLT+PNFVLRNVDLAFSCCGQT AVEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMA GGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMSTLAGISEGSLKRVLGTEN+IQARVDIARLDVMETMGN+ LPAAGPTSR GQAERSNGI+DQCDGDA+KGDSDDWGCGDIATWRAVHERA+WHF PDARAVG+I++TIE FYVEQGLEPVQA QACRD LLPSVEPAALGTRS QRA LP+ LSSP +         P  PNLQMKE GDK G ERWTP+S WPPPDLVLMEDVYEQMLRVPYGDAVRESGYQS L
Sbjct:    1 MASTMDGFTRTWRCMDRLNVEDELVQDLTDPNFVLRNVDLAFSCCGQTPAVEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSTLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAVGKIIETIESFYVEQGLEPVQARQACRDWLLPSVEPAALGTRSHQRANLPRTLSSPVQP-------HPLHPNLQMKEDGDKPGCERWTPRSYWPPPDLVLMEDVYEQMLRVPYGDAVRESGYQSGL 407
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1286.1748.1 vs. uniprot
Match: D7G368_ECTSI (F420_oxidored domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G368_ECTSI)

HSP 1 Score: 482 bits (1240), Expect = 4.650e-168
Identity = 245/270 (90.74%), Postives = 257/270 (95.19%), Query Frame = 0 
Query:   79 MFKQMAGIDKKSKRMAFGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLKRVLGTENVIQARVDIARLDVMETMGNRVLPAAGPTSRAGQAERSNGIRDQCDGDAVKGDSDDWGCGDIATWRAVHERAAWHFIPDARAVGQIVDTIEYFYVEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRATLPQILSSPGKAR 348
            MFKQMAGIDKKSKRMA GGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLG+NGTASALVMS LAGISEGSLKRVLGTEN+IQARVDIARLDVMETMGN+ LPAAGPTSR GQAERSNGI+DQCDGDA+KGDSDDWGCGDIATWRAVHERA+WHF PDARA+G+I++TIE FYVEQGLEPVQA QACRDRLLPSVEPA LGTRS QRA LP+ LSSP + R
Sbjct:    1 MFKQMAGIDKKSKRMAVGGPLIGIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFEDVSLLVRAVRLVIVAVGPQHARQVGSTLGENGTASALVMSNLAGISEGSLKRVLGTENLIQARVDIARLDVMETMGNKGLPAAGPTSRVGQAERSNGIKDQCDGDAMKGDSDDWGCGDIATWRAVHERASWHFTPDARAIGKIIETIESFYVEQGLEPVQARQACRDRLLPSVEPAVLGTRSHQRANLPRTLSSPDEGR 270
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1286.1748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G366_ECTSI1.820e-26689.86F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
D7G368_ECTSI4.650e-16890.74F420_oxidored domain-containing protein n=1 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028939Pyrroline-5-carboxylate reductase, catalytic, N-terminalPFAMPF03807F420_oxidoredcoord: 100..193
e-value: 1.9E-8
score: 34.8
NoneNo IPR availableGENE3D3.40.50.720coord: 99..228
e-value: 4.7E-16
score: 60.9
NoneNo IPR availablePANTHERPTHR11645:SF0PYRROLINE-5-CARBOXYLATE REDUCTASE 2coord: 100..217
NoneNo IPR availablePANTHERPTHR11645PYRROLINE-5-CARBOXYLATE REDUCTASEcoord: 100..217
NoneNo IPR availableTMHMMTMhelixcoord: 95..117
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 100..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1286contigE-siliculosus-1a_F_contig1286:10532..17042 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1286.1748.1mRNA_E-siliculosus-1a_F_contig1286.1748.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1286 10532..17042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1286.1748.1 ID=prot_E-siliculosus-1a_F_contig1286.1748.1|Name=mRNA_E-siliculosus-1a_F_contig1286.1748.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=415bp
MASTMDGFTRTWRCLDRLNVEDELVQDLTNPNFVLRNVDLAFSCCGQTRA
VEEGYLRRKEVQRLICSQCLFVAGFLPPMFKQMAGIDKKSKRMAFGGPLI
GIVGAGGQLGSAIVQTFLDYGWKPFRLAVSGRGQKKLRKFEALGVGVFED
VSLLVRAVRLVIVAVGPQHARQVGSTLGDNGTASALVMSTLAGISEGSLK
RVLGTENVIQARVDIARLDVMETMGNRVLPAAGPTSRAGQAERSNGIRDQ
CDGDAVKGDSDDWGCGDIATWRAVHERAAWHFIPDARAVGQIVDTIEYFY
VEQGLEPVQAHQACRDRLLPSVEPAALGTRSQQRATLPQILSSPGKARCE
HRFNQPAAPNLQMKEGGDKAGGERWTPQSNWPPPDLVLMEDVYEQMLRVP
YGDAVRESGYQSEL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036291NAD(P)-bd_dom_sf
IPR028939P5C_Rdtase_cat_N