prot_E-siliculosus-1a_F_contig12856.1746.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12856.1746.1
Unique Nameprot_E-siliculosus-1a_F_contig12856.1746.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length128
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A7X3H214_9GAMM (RidA family protein n=1 Tax=Halomonas zhuhanensis TaxID=2684210 RepID=A0A7X3H214_9GAMM)

HSP 1 Score: 217 bits (552), Expect = 6.970e-71
Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 123
            MIQPV+T+LYAA+APLEWAV+GNGILFTAQIPI ADGAVV+GGIEAQTRQTLDNLQHTL+SAGA MQQL QVLIYVTQREDLAT+NRVYAEYV APYPNRAAIIV+GFAREEM VEMVAYAAV
Sbjct:    1 MIQPVKTELYAARAPLEWAVIGNGILFTAQIPIGADGAVVDGGIEAQTRQTLDNLQHTLESAGASMQQLTQVLIYVTQREDLATVNRVYAEYVAAPYPNRAAIIVTGFAREEMRVEMVAYAAV 123          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A7G7Z885_9GAMM (RidA family protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A7G7Z885_9GAMM)

HSP 1 Score: 216 bits (550), Expect = 1.270e-70
Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 122
            MIQPV+TDLYAAKAPLEWAVVGNGILFTAQIPI ADG VVEGGIEAQ+RQTLDNL+HTL+SAGA MQQL QVLIYVTQR+DL T+NRVY+EYVTAPYPNRAAIIVSGFAREEML+EMVAYAA
Sbjct:    1 MIQPVKTDLYAAKAPLEWAVVGNGILFTAQIPIGADGIVVEGGIEAQSRQTLDNLKHTLESAGASMQQLTQVLIYVTQRDDLVTVNRVYSEYVTAPYPNRAAIIVSGFAREEMLIEMVAYAA 122          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1H0CEA8_9GAMM (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Halomonas arcis TaxID=416873 RepID=A0A1H0CEA8_9GAMM)

HSP 1 Score: 214 bits (544), Expect = 1.160e-69
Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 124
            MIQPV+T+LYAAKAPLEWAVVGNGILFTAQIPID DGAVVEGGIE QTRQTLDNLQHTL+SAGAGM QL QVLIYVT+REDLAT+N VYA YV  PYPNRAAIIVSGFAREEMLVEMVAYAA++
Sbjct:    1 MIQPVKTNLYAAKAPLEWAVVGNGILFTAQIPIDPDGAVVEGGIEVQTRQTLDNLQHTLESAGAGMSQLTQVLIYVTKREDLATVNEVYANYVQKPYPNRAAIIVSGFAREEMLVEMVAYAALA 124          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: UPI0018A7A237 (RidA family protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI0018A7A237)

HSP 1 Score: 211 bits (538), Expect = 1.050e-68
Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 123
            MI PV TDL+AAKAPLEWAV+GNGILFTAQIPI ADGAVVEGGIEAQ RQTLDNL+HTL SAGAGM  L QVLIYVT+REDLAT+NR+YA+YVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV
Sbjct:    1 MIHPVSTDLFAAKAPLEWAVIGNGILFTAQIPIGADGAVVEGGIEAQARQTLDNLRHTLASAGAGMADLTQVLIYVTRREDLATVNRLYADYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 123          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1J0VKI7_9GAMM (Reactive intermediate/imine deaminase n=1 Tax=Halomonas aestuarii TaxID=1897729 RepID=A0A1J0VKI7_9GAMM)

HSP 1 Score: 210 bits (535), Expect = 3.100e-68
Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVSEVS 127
            MIQPV TDLYAAKAPLEWAV+G+GILFTAQIPI ADGAVVEGGIEAQTRQTLDNL+HTL  AG GM  L QVLIYVT+REDLAT+NR+YAEYV+ PYPNRAAIIVSGFAREEMLVEMVAYAA+ E +
Sbjct:    1 MIQPVSTDLYAAKAPLEWAVIGHGILFTAQIPIGADGAVVEGGIEAQTRQTLDNLRHTLTCAGGGMANLTQVLIYVTRREDLATVNRLYAEYVSEPYPNRAAIIVSGFAREEMLVEMVAYAAMQETA 127          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A5K1I257_9GAMM (Enamine/imine deaminase n=6 Tax=Halomonas TaxID=2745 RepID=A0A5K1I257_9GAMM)

HSP 1 Score: 209 bits (532), Expect = 6.850e-68
Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 122
            MIQPV TDLYAAKAPLEWAV+GNGILFTAQIPI ADGAVV+GGIEAQTRQTLDNL+HTL  AG  MQ L QVLIYVT+REDLAT+NR+YAEYV APYPNRAAIIVSGFAREEMLVEMVAYAA
Sbjct:    1 MIQPVTTDLYAAKAPLEWAVIGNGILFTAQIPIGADGAVVDGGIEAQTRQTLDNLRHTLVCAGGDMQNLTQVLIYVTRREDLATVNRLYAEYVCAPYPNRAAIIVSGFAREEMLVEMVAYAA 122          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A291PBT2_9GAMM (RidA/YER057c/UK114 superfamily protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A291PBT2_9GAMM)

HSP 1 Score: 207 bits (526), Expect = 6.620e-67
Identity = 107/124 (86.29%), Postives = 113/124 (91.13%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 124
            MI PVRTDL+A+KAPLEWAVVGNGILFTAQIPI ADG VVEGGIEAQTRQTLDNL HTL+ AGAG + L QVLIYVT REDLAT+NRVYAEYV  PYPNRAAIIVSGFAREEMLVEMVAYAAV+
Sbjct:    1 MIHPVRTDLFASKAPLEWAVVGNGILFTAQIPIGADGQVVEGGIEAQTRQTLDNLVHTLEKAGAGPEALTQVLIYVTAREDLATVNRVYAEYVREPYPNRAAIIVSGFAREEMLVEMVAYAAVA 124          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1P8R7W5_9GAMM (Reactive intermediate/imine deaminase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1P8R7W5_9GAMM)

HSP 1 Score: 206 bits (524), Expect = 1.470e-66
Identity = 103/122 (84.43%), Postives = 114/122 (93.44%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 122
            MI PVRTDL+AAKAPLEWAV+GNGILFTAQIPI +DGAVV+GGIEAQ RQTL+NL+HTL  AG GMQ L QVLIYVT+REDLAT+NR+YA+YVTAP+PNRAAIIVSGFAREEMLVEMVAYAA
Sbjct:    1 MIHPVRTDLFAAKAPLEWAVIGNGILFTAQIPIGSDGAVVQGGIEAQARQTLENLRHTLACAGGGMQDLTQVLIYVTRREDLATVNRLYADYVTAPFPNRAAIIVSGFAREEMLVEMVAYAA 122          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1G9P6J7_9GAMM (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Halomonas muralis TaxID=119000 RepID=A0A1G9P6J7_9GAMM)

HSP 1 Score: 205 bits (521), Expect = 3.710e-66
Identity = 101/124 (81.45%), Postives = 114/124 (91.94%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 124
            MI PV+TDL+A+KAPLEWAV+GNG+LFTAQIPI ADG VVEGGIEAQTRQTLDNL+HTL+ AGAG+  L QVLIYVT R+DLAT+NR+YA+YVT PYPNRAAI+VSGFAREEM VEMVAYAAVS
Sbjct:    1 MITPVKTDLFASKAPLEWAVIGNGLLFTAQIPIGADGQVVEGGIEAQTRQTLDNLEHTLECAGAGLDSLTQVLIYVTDRDDLATVNRIYADYVTPPYPNRAAIVVSGFAREEMRVEMVAYAAVS 124          
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: UPI0004DB7613 (RidA family protein n=1 Tax=Halomonas zincidurans TaxID=1178777 RepID=UPI0004DB7613)

HSP 1 Score: 202 bits (514), Expect = 4.190e-65
Identity = 100/124 (80.65%), Postives = 114/124 (91.94%), Query Frame = 0
Query:    1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 124
            MI PV+T+L+A++APLEWAV+GNG+LFTAQIPIDADG VVEGGIEAQ RQTLDNL+HTL+ AGAGM  L QVLIYVT+R+DLAT+NRVYAEYV  PYPNRAAIIVSGFAREEM VEMVAYAA++
Sbjct:    1 MITPVKTNLFASQAPLEWAVIGNGLLFTAQIPIDADGQVVEGGIEAQVRQTLDNLEHTLRKAGAGMHALTQVLIYVTRRDDLATVNRVYAEYVQEPYPNRAAIIVSGFAREEMRVEMVAYAAIA 124          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X3H214_9GAMM6.970e-7189.43RidA family protein n=1 Tax=Halomonas zhuhanensis ... [more]
A0A7G7Z885_9GAMM1.270e-7089.34RidA family protein n=6 Tax=Halomonas TaxID=2745 R... [more]
A0A1H0CEA8_9GAMM1.160e-6987.90Enamine deaminase RidA, house cleaning of reactive... [more]
UPI0018A7A2371.050e-6887.80RidA family protein n=2 Tax=unclassified Halomonas... [more]
A0A1J0VKI7_9GAMM3.100e-6884.25Reactive intermediate/imine deaminase n=1 Tax=Halo... [more]
A0A5K1I257_9GAMM6.850e-6887.70Enamine/imine deaminase n=6 Tax=Halomonas TaxID=27... [more]
A0A291PBT2_9GAMM6.620e-6786.29RidA/YER057c/UK114 superfamily protein n=6 Tax=Hal... [more]
A0A1P8R7W5_9GAMM1.470e-6684.43Reactive intermediate/imine deaminase n=2 Tax=Halo... [more]
A0A1G9P6J7_9GAMM3.710e-6681.45Enamine deaminase RidA, house cleaning of reactive... [more]
UPI0004DB76134.190e-6580.65RidA family protein n=1 Tax=Halomonas zincidurans ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035959RutC-like superfamilyGENE3D3.30.1330.40coord: 5..123
e-value: 1.8E-29
score: 104.1
IPR035959RutC-like superfamilySUPERFAMILY55298YjgF-likecoord: 7..124
IPR006175YjgF/YER057c/UK114 familyPFAMPF01042Ribonuc_L-PSPcoord: 14..122
e-value: 1.2E-21
score: 77.0
IPR006175YjgF/YER057c/UK114 familyPANTHERPTHR118032-IMINOBUTANOATE/2-IMINOPROPANOATE DEAMINASE RIDAcoord: 15..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12856contigE-siliculosus-1a_F_contig12856:543..926 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12856.1746.1mRNA_E-siliculosus-1a_F_contig12856.1746.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12856 543..926 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12856.1746.1 ID=prot_E-siliculosus-1a_F_contig12856.1746.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1746.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp
MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQ
TLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNR
AAIIVSGFAREEMLVEMVAYAAVSEVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006175YjgF/YER057c/UK114
IPR035959RutC-like_sf