mRNA_E-siliculosus-1a_F_contig12856.1746.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A7X3H214_9GAMM (RidA family protein n=1 Tax=Halomonas zhuhanensis TaxID=2684210 RepID=A0A7X3H214_9GAMM) HSP 1 Score: 217 bits (552), Expect = 6.970e-71 Identity = 110/123 (89.43%), Postives = 118/123 (95.93%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 369
MIQPV+T+LYAA+APLEWAV+GNGILFTAQIPI ADGAVV+GGIEAQTRQTLDNLQHTL+SAGA MQQL QVLIYVTQREDLAT+NRVYAEYV APYPNRAAIIV+GFAREEM VEMVAYAAV
Sbjct: 1 MIQPVKTELYAARAPLEWAVIGNGILFTAQIPIGADGAVVDGGIEAQTRQTLDNLQHTLESAGASMQQLTQVLIYVTQREDLATVNRVYAEYVAAPYPNRAAIIVTGFAREEMRVEMVAYAAV 123
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A7G7Z885_9GAMM (RidA family protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A7G7Z885_9GAMM) HSP 1 Score: 216 bits (550), Expect = 1.270e-70 Identity = 109/122 (89.34%), Postives = 117/122 (95.90%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 366
MIQPV+TDLYAAKAPLEWAVVGNGILFTAQIPI ADG VVEGGIEAQ+RQTLDNL+HTL+SAGA MQQL QVLIYVTQR+DL T+NRVY+EYVTAPYPNRAAIIVSGFAREEML+EMVAYAA
Sbjct: 1 MIQPVKTDLYAAKAPLEWAVVGNGILFTAQIPIGADGIVVEGGIEAQSRQTLDNLKHTLESAGASMQQLTQVLIYVTQRDDLVTVNRVYSEYVTAPYPNRAAIIVSGFAREEMLIEMVAYAA 122
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1H0CEA8_9GAMM (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Halomonas arcis TaxID=416873 RepID=A0A1H0CEA8_9GAMM) HSP 1 Score: 214 bits (544), Expect = 1.160e-69 Identity = 109/124 (87.90%), Postives = 116/124 (93.55%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 372
MIQPV+T+LYAAKAPLEWAVVGNGILFTAQIPID DGAVVEGGIE QTRQTLDNLQHTL+SAGAGM QL QVLIYVT+REDLAT+N VYA YV PYPNRAAIIVSGFAREEMLVEMVAYAA++
Sbjct: 1 MIQPVKTNLYAAKAPLEWAVVGNGILFTAQIPIDPDGAVVEGGIEVQTRQTLDNLQHTLESAGAGMSQLTQVLIYVTKREDLATVNEVYANYVQKPYPNRAAIIVSGFAREEMLVEMVAYAALA 124
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: UPI0018A7A237 (RidA family protein n=2 Tax=unclassified Halomonas TaxID=2609666 RepID=UPI0018A7A237) HSP 1 Score: 211 bits (538), Expect = 1.050e-68 Identity = 108/123 (87.80%), Postives = 115/123 (93.50%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 369
MI PV TDL+AAKAPLEWAV+GNGILFTAQIPI ADGAVVEGGIEAQ RQTLDNL+HTL SAGAGM L QVLIYVT+REDLAT+NR+YA+YVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV
Sbjct: 1 MIHPVSTDLFAAKAPLEWAVIGNGILFTAQIPIGADGAVVEGGIEAQARQTLDNLRHTLASAGAGMADLTQVLIYVTRREDLATVNRLYADYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAV 123
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1J0VKI7_9GAMM (Reactive intermediate/imine deaminase n=1 Tax=Halomonas aestuarii TaxID=1897729 RepID=A0A1J0VKI7_9GAMM) HSP 1 Score: 210 bits (535), Expect = 3.100e-68 Identity = 107/127 (84.25%), Postives = 116/127 (91.34%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVSEVS 381
MIQPV TDLYAAKAPLEWAV+G+GILFTAQIPI ADGAVVEGGIEAQTRQTLDNL+HTL AG GM L QVLIYVT+REDLAT+NR+YAEYV+ PYPNRAAIIVSGFAREEMLVEMVAYAA+ E +
Sbjct: 1 MIQPVSTDLYAAKAPLEWAVIGHGILFTAQIPIGADGAVVEGGIEAQTRQTLDNLRHTLTCAGGGMANLTQVLIYVTRREDLATVNRLYAEYVSEPYPNRAAIIVSGFAREEMLVEMVAYAAMQETA 127
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A5K1I257_9GAMM (Enamine/imine deaminase n=6 Tax=Halomonas TaxID=2745 RepID=A0A5K1I257_9GAMM) HSP 1 Score: 209 bits (532), Expect = 6.850e-68 Identity = 107/122 (87.70%), Postives = 113/122 (92.62%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 366
MIQPV TDLYAAKAPLEWAV+GNGILFTAQIPI ADGAVV+GGIEAQTRQTLDNL+HTL AG MQ L QVLIYVT+REDLAT+NR+YAEYV APYPNRAAIIVSGFAREEMLVEMVAYAA
Sbjct: 1 MIQPVTTDLYAAKAPLEWAVIGNGILFTAQIPIGADGAVVDGGIEAQTRQTLDNLRHTLVCAGGDMQNLTQVLIYVTRREDLATVNRLYAEYVCAPYPNRAAIIVSGFAREEMLVEMVAYAA 122
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A291PBT2_9GAMM (RidA/YER057c/UK114 superfamily protein n=6 Tax=Halomonas TaxID=2745 RepID=A0A291PBT2_9GAMM) HSP 1 Score: 207 bits (526), Expect = 6.620e-67 Identity = 107/124 (86.29%), Postives = 113/124 (91.13%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 372
MI PVRTDL+A+KAPLEWAVVGNGILFTAQIPI ADG VVEGGIEAQTRQTLDNL HTL+ AGAG + L QVLIYVT REDLAT+NRVYAEYV PYPNRAAIIVSGFAREEMLVEMVAYAAV+
Sbjct: 1 MIHPVRTDLFASKAPLEWAVVGNGILFTAQIPIGADGQVVEGGIEAQTRQTLDNLVHTLEKAGAGPEALTQVLIYVTAREDLATVNRVYAEYVREPYPNRAAIIVSGFAREEMLVEMVAYAAVA 124
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1P8R7W5_9GAMM (Reactive intermediate/imine deaminase n=2 Tax=Halomonas TaxID=2745 RepID=A0A1P8R7W5_9GAMM) HSP 1 Score: 206 bits (524), Expect = 1.470e-66 Identity = 103/122 (84.43%), Postives = 114/122 (93.44%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAA 366
MI PVRTDL+AAKAPLEWAV+GNGILFTAQIPI +DGAVV+GGIEAQ RQTL+NL+HTL AG GMQ L QVLIYVT+REDLAT+NR+YA+YVTAP+PNRAAIIVSGFAREEMLVEMVAYAA
Sbjct: 1 MIHPVRTDLFAAKAPLEWAVIGNGILFTAQIPIGSDGAVVQGGIEAQARQTLENLRHTLACAGGGMQDLTQVLIYVTRREDLATVNRLYADYVTAPFPNRAAIIVSGFAREEMLVEMVAYAA 122
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: A0A1G9P6J7_9GAMM (Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family n=1 Tax=Halomonas muralis TaxID=119000 RepID=A0A1G9P6J7_9GAMM) HSP 1 Score: 205 bits (521), Expect = 3.710e-66 Identity = 101/124 (81.45%), Postives = 114/124 (91.94%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 372
MI PV+TDL+A+KAPLEWAV+GNG+LFTAQIPI ADG VVEGGIEAQTRQTLDNL+HTL+ AGAG+ L QVLIYVT R+DLAT+NR+YA+YVT PYPNRAAI+VSGFAREEM VEMVAYAAVS
Sbjct: 1 MITPVKTDLFASKAPLEWAVIGNGLLFTAQIPIGADGQVVEGGIEAQTRQTLDNLEHTLECAGAGLDSLTQVLIYVTDRDDLATVNRIYADYVTPPYPNRAAIVVSGFAREEMRVEMVAYAAVS 124
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Match: UPI0004DB7613 (RidA family protein n=1 Tax=Halomonas zincidurans TaxID=1178777 RepID=UPI0004DB7613) HSP 1 Score: 202 bits (514), Expect = 4.190e-65 Identity = 100/124 (80.65%), Postives = 114/124 (91.94%), Query Frame = 1
Query: 1 MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQTLDNLQHTLKSAGAGMQQLIQVLIYVTQREDLATINRVYAEYVTAPYPNRAAIIVSGFAREEMLVEMVAYAAVS 372
MI PV+T+L+A++APLEWAV+GNG+LFTAQIPIDADG VVEGGIEAQ RQTLDNL+HTL+ AGAGM L QVLIYVT+R+DLAT+NRVYAEYV PYPNRAAIIVSGFAREEM VEMVAYAA++
Sbjct: 1 MITPVKTNLFASQAPLEWAVIGNGLLFTAQIPIDADGQVVEGGIEAQVRQTLDNLEHTLRKAGAGMHALTQVLIYVTRRDDLATVNRVYAEYVQEPYPNRAAIIVSGFAREEMRVEMVAYAAIA 124 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12856.1746.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E-siliculosus-1a_F_contig12856.1746.1 >prot_E-siliculosus-1a_F_contig12856.1746.1 ID=prot_E-siliculosus-1a_F_contig12856.1746.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1746.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp MIQPVRTDLYAAKAPLEWAVVGNGILFTAQIPIDADGAVVEGGIEAQTRQback to top mRNA from alignment at E-siliculosus-1a_F_contig12856:543..926+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E-siliculosus-1a_F_contig12856.1746.1 ID=mRNA_E-siliculosus-1a_F_contig12856.1746.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1746.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=384bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12856:543..926+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12856:543..926+ >mRNA_E-siliculosus-1a_F_contig12856.1746.1 ID=mRNA_E-siliculosus-1a_F_contig12856.1746.1|Name=mRNA_E-siliculosus-1a_F_contig12856.1746.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=768bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12856:543..926+ (Ectocarpus siliculosus Ec863f_EcPH12_90f female)back to top |