prot_E-siliculosus-1a_F_contig12808.1725.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig12808.1725.1
Unique Name	prot_E-siliculosus-1a_F_contig12808.1725.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	118

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A455U6Z8_9GAMM (Uncharacterized protein n=1 Tax=Halomonas sulfidaeris TaxID=115553 RepID=A0A455U6Z8_9GAMM)

HSP 1 Score: 195 bits (496), Expect = 2.210e-62
Identity = 105/117 (89.74%), Postives = 113/117 (96.58%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TTS+ES+ISLGVV LLFATIFKVLPDV+LRWQDVLIGA VTAVLFT+GRS+IA YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAV++K EF+
Sbjct:   21 TTSVESLISLGVVTLLFATIFKVLPDVMLRWQDVLIGAVVTAVLFTIGRSVIAIYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVIVKREFV 137

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A0F9XNX1_9ZZZZ (Uncharacterized protein n=1 Tax=marine sediment metagenome TaxID=412755 RepID=A0A0F9XNX1_9ZZZZ)

HSP 1 Score: 201 bits (510), Expect = 2.590e-62
Identity = 111/117 (94.87%), Postives = 114/117 (97.44%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            T +IES+ISLGVVILLFATIFKVLPDVVLRWQDVLIGA VTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIK EF+
Sbjct:  183 TMTIESLISLGVVILLFATIFKVLPDVVLRWQDVLIGAAVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKQEFV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A651D5R5_HALSX (YihY/virulence factor BrkB family protein n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A651D5R5_HALSX)

HSP 1 Score: 195 bits (495), Expect = 4.790e-60
Identity = 105/117 (89.74%), Postives = 112/117 (95.73%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TTS+ES+ISLGVVILLFATIFKVLPDVVL WQDV IGA VTA+LFT+GRSLIA YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAV++K EF+
Sbjct:  183 TTSLESLISLGVVILLFATIFKVLPDVVLHWQDVFIGAVVTAILFTIGRSLIAIYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVVVKREFV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A455V8A5_9GAMM (Uncharacterized protein n=1 Tax=Halomonas axialensis TaxID=115555 RepID=A0A455V8A5_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 3.420e-59
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TT+ ES+ISL +V LLFATIFKVLPDVVLRWQDV IGA VTAVLFT+GRS+I  YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPL+PRNSAVL+KHE +
Sbjct:   42 TTTAESLISLAMVALLFATIFKVLPDVVLRWQDVFIGAVVTAVLFTIGRSVITIYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLVPRNSAVLVKHELL 158

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A0D5M3E8_9GAMM (Ribonuclease BN n=27 Tax=Halomonadaceae TaxID=28256 RepID=A0A0D5M3E8_9GAMM)

HSP 1 Score: 191 bits (485), Expect = 1.550e-58
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TT++ES+IS+ +V +LFATIFKVLPDVVLRWQDVLIGA VTAVLFT+GRS+I+ YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHE++
Sbjct:  183 TTTLESLISVAMVTMLFATIFKVLPDVVLRWQDVLIGAVVTAVLFTIGRSVISVYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEYV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A7X4FZ03_9GAMM (YihY family inner membrane protein n=2 Tax=Halomonas TaxID=2745 RepID=A0A7X4FZ03_9GAMM)

HSP 1 Score: 191 bits (485), Expect = 2.440e-58
Identity = 101/116 (87.07%), Postives = 112/116 (96.55%), Query Frame = 0

Query:    2 TSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            +S+ES+I+LGVV+LLFATIFKVLPDV+LRWQDVLIGA VTAVLFT+GRSLIA YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGR L+PRNSAV++K EF+
Sbjct:  184 SSVESLIALGVVVLLFATIFKVLPDVILRWQDVLIGAVVTAVLFTIGRSLIAIYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRTLVPRNSAVIVKREFV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A060BAC4_9GAMM (Ribonuclease BN n=16 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A060BAC4_9GAMM)

HSP 1 Score: 189 bits (480), Expect = 8.850e-58
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TTS+ES+ISL +V LLFATIFKVLPDVVLRWQDVLIGA VTAVLFT+GRS+IA YL YTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPL+PRNSAVL+K E +
Sbjct:  183 TTSLESLISLAMVALLFATIFKVLPDVVLRWQDVLIGAVVTAVLFTIGRSVIAIYLTYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLVPRNSAVLVKRELV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: H0IXX6_9GAMM (tRNA-processing ribonuclease BN n=3 Tax=Halomonas TaxID=2745 RepID=H0IXX6_9GAMM)

HSP 1 Score: 189 bits (479), Expect = 1.250e-57
Identity = 102/117 (87.18%), Postives = 110/117 (94.02%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TTS+ES+ISL VV+LLFATIFKVLPDVVL WQDV IGA VTAVLFT+GR++IA YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPL+PRNSAVL+K E I
Sbjct:  183 TTSLESLISLAVVVLLFATIFKVLPDVVLSWQDVFIGAVVTAVLFTIGRNIIAVYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLVPRNSAVLVKRELI 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: UPI00201E959A (YihY/virulence factor BrkB family protein n=1 Tax=Halomonas olivaria TaxID=390919 RepID=UPI00201E959A)

HSP 1 Score: 188 bits (478), Expect = 1.930e-57
Identity = 102/117 (87.18%), Postives = 111/117 (94.87%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TT++ES+ISL +V+LLFATIFKVLPDVVLRWQDVLIGA VTAVLFT+GRS+IA YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLL RGRPLIPRNSAVL+K E +
Sbjct:  183 TTTLESLISLAMVVLLFATIFKVLPDVVLRWQDVLIGAVVTAVLFTIGRSIIAVYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLCRGRPLIPRNSAVLVKQELV 299

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BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Match: A0A1N6CZF5_9GAMM (Membrane protein n=12 Tax=Halomonas TaxID=2745 RepID=A0A1N6CZF5_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 2.580e-57
Identity = 101/117 (86.32%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRSLIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLIPRNSAVLIKHEFI 117
            TT+ ES+ISL +V LLFATIFKVLPDVVLRWQDV IGA VTAVLFT+GRS+I  YLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPL+PRNSAVL+KHE +
Sbjct:  184 TTTAESLISLAMVALLFATIFKVLPDVVLRWQDVFIGAVVTAVLFTIGRSVITIYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRGRPLVPRNSAVLVKHELL 300

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig12808.1725.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A455U6Z8_9GAMM	2.210e-62	89.74	Uncharacterized protein n=1 Tax=Halomonas sulfidae...	[more]
A0A0F9XNX1_9ZZZZ	2.590e-62	94.87	Uncharacterized protein n=1 Tax=marine sediment me...	[more]
A0A651D5R5_HALSX	4.790e-60	89.74	YihY/virulence factor BrkB family protein n=1 Tax=...	[more]
A0A455V8A5_9GAMM	3.420e-59	86.32	Uncharacterized protein n=1 Tax=Halomonas axialens...	[more]
A0A0D5M3E8_9GAMM	1.550e-58	87.18	Ribonuclease BN n=27 Tax=Halomonadaceae TaxID=2825...	[more]
A0A7X4FZ03_9GAMM	2.440e-58	87.07	YihY family inner membrane protein n=2 Tax=Halomon...	[more]
A0A060BAC4_9GAMM	8.850e-58	87.18	Ribonuclease BN n=16 Tax=Gammaproteobacteria TaxID...	[more]
H0IXX6_9GAMM	1.250e-57	87.18	tRNA-processing ribonuclease BN n=3 Tax=Halomonas ...	[more]
UPI00201E959A	1.930e-57	87.18	YihY/virulence factor BrkB family protein n=1 Tax=...	[more]
A0A1N6CZF5_9GAMM	2.580e-57	86.32	Membrane protein n=12 Tax=Halomonas TaxID=2745 Rep...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..117
None	No IPR available	PANTHER	PTHR30213:SF1	INNER MEMBRANE PROTEIN YHJD	coord: 2..95
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 92..117
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..63
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..24
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 25..35
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 36..58
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 64..91
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	TMHMM	TMhelix		coord: 69..91
None	No IPR available	TMHMM	TMhelix		coord: 34..56
None	No IPR available	TMHMM	TMhelix		coord: 7..29
IPR017039	Virulence factor BrkB	PFAM	PF03631	Virul_fac_BrkB	coord: 6..95 e-value: 2.0E-22 score: 80.1
IPR017039	Virulence factor BrkB	PANTHER	PTHR30213	UNCHARACTERIZED	coord: 2..95

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig12808	contig	E-siliculosus-1a_F_contig12808:1116..1469 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig12808.1725.1	mRNA_E-siliculosus-1a_F_contig12808.1725.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig12808 1116..1469 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12808.1725.1 ID=prot_E-siliculosus-1a_F_contig12808.1725.1|Name=mRNA_E-siliculosus-1a_F_contig12808.1725.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=118bp
TTSIESVISLGVVILLFATIFKVLPDVVLRWQDVLIGATVTAVLFTLGRS
LIAFYLAYTATASTYGAAGSVVMILLWVYYSSLILLFGAAFTRSLLLRRG
RPLIPRNSAVLIKHEFI*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR017039	Virul_fac_BrkB