prot_E-siliculosus-1a_F_contig12776.1697.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12776.1697.1
Unique Nameprot_E-siliculosus-1a_F_contig12776.1697.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length59
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: D7FT66_ECTSI (TUG-UBL1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT66_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 1.280e-23
Identity = 45/50 (90.00%), Postives = 46/50 (92.00%), Query Frame = 0
Query:    8 VHVVVQMACREFGLDAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLELT 57
            +  VVQMACREFGLD GSPNWVLKHKR VVDLSQPFRFTGIPQNATLELT
Sbjct:   25 MSTVVQMACREFGLDTGSPNWVLKHKRVVVDLSQPFRFTGIPQNATLELT 74          
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: A0A4D9D7M0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7M0_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 9.240e-10
Identity = 29/58 (50.00%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 QCLPPLDVHVVVQMACREFGL-DAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLELT 57
            +C P   +   ++ ACRE G+ +A  P +VL +K+  +DLSQPFRFTGIP NA LEL+
Sbjct:   49 KCSPNSTMQTALEHACREHGIGEAAWPGYVLLYKKGPIDLSQPFRFTGIPNNAALELS 106          
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: K8ZCM3_NANGC (Tether containing ubx domain for glut4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8ZCM3_NANGC)

HSP 1 Score: 58.5 bits (140), Expect = 1.630e-9
Identity = 27/58 (46.55%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    1 QCLPPLDVHVVVQMACREFGL-DAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLELT 57
            +C P   +   ++ ACRE G+ +A    ++L +K+  +DLSQPFRFTGIP NA LEL+
Sbjct:   15 KCSPNSTMQTALEHACREHGIGEAAWTGYILLYKKGPIDLSQPFRFTGIPNNAALELS 72          
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: A0A1V9Z967_9STRA (UBX domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z967_9STRA)

HSP 1 Score: 51.6 bits (122), Expect = 4.300e-6
Identity = 25/49 (51.02%), Postives = 34/49 (69.39%), Query Frame = 0
Query:   11 VVQMACREFGLDAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLELTVR 59
            V++ AC   G+DA    + L+HK AVVDLS PFR TG+  NATL++ V+
Sbjct:   25 VLRKACEAHGVDAD--RFELRHKNAVVDLSLPFRLTGVSSNATLDMVVK 71          
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: A0A835YJ49_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ49_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 2.840e-5
Identity = 25/49 (51.02%), Postives = 32/49 (65.31%), Query Frame = 0
Query:    8 VHVVVQMACREFGLDAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLEL 56
            +  V+  AC   GL   +  + L HK+AVVDL+QPFR + IPQN TLEL
Sbjct:   24 MSAVLADACAAHGL-TNTAKYTLFHKKAVVDLTQPFRLSSIPQNTTLEL 71          
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Match: N6U5Z3_DENPD (UBX domain-containing protein (Fragment) n=2 Tax=Dendroctonus ponderosae TaxID=77166 RepID=N6U5Z3_DENPD)

HSP 1 Score: 48.1 bits (113), Expect = 7.230e-5
Identity = 22/56 (39.29%), Postives = 36/56 (64.29%), Query Frame = 0
Query:    1 QCLPPLDVHVVVQMACREFGLDAGSPNWVLKHKRAVVDLSQPFRFTGIPQNATLEL 56
            +C P   +  V++  C++ GL+AG  ++ +KH   V+D +  FRF+G+P NA LEL
Sbjct:   19 KCTPNTTILQVIEEVCKKQGLNAG--DYDIKHHNKVLDTTTTFRFSGLPNNAQLEL 72          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12776.1697.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FT66_ECTSI1.280e-2390.00TUG-UBL1 domain-containing protein n=1 Tax=Ectocar... [more]
A0A4D9D7M0_9STRA9.240e-1050.00Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8ZCM3_NANGC1.630e-946.55Tether containing ubx domain for glut4 (Fragment) ... [more]
A0A1V9Z967_9STRA4.300e-651.02UBX domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A835YJ49_9STRA2.840e-551.02UBX domain-containing protein n=1 Tax=Tribonema mi... [more]
N6U5Z3_DENPD7.230e-539.29UBX domain-containing protein (Fragment) n=2 Tax=D... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021569TUG ubiquitin-like domainPFAMPF11470TUG-UBL1coord: 9..56
e-value: 3.4E-17
score: 62.4
NoneNo IPR availableGENE3D3.10.20.90coord: 4..59
e-value: 1.6E-14
score: 55.5
IPR029071Ubiquitin-like domain superfamilySUPERFAMILY54236Ubiquitin-likecoord: 9..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12776contigE-siliculosus-1a_F_contig12776:26..202 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12776.1697.1mRNA_E-siliculosus-1a_F_contig12776.1697.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12776 26..202 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12776.1697.1 ID=prot_E-siliculosus-1a_F_contig12776.1697.1|Name=mRNA_E-siliculosus-1a_F_contig12776.1697.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=59bp
QCLPPLDVHVVVQMACREFGLDAGSPNWVLKHKRAVVDLSQPFRFTGIPQ
NATLELTVR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR021569TUG-UBL1