prot_E-siliculosus-1a_F_contig1274.1679.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1274.1679.1
Unique Nameprot_E-siliculosus-1a_F_contig1274.1679.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length203
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1274.1679.1 vs. uniprot
Match: D7FI02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI02_ECTSI)

HSP 1 Score: 362 bits (929), Expect = 6.650e-126
Identity = 187/203 (92.12%), Postives = 191/203 (94.09%), Query Frame = 0 
Query:    1 MSGERAKLVVLGLVLAVIARSYIISDVFTRGIMMSSTLGFFEDSLCKARPPADRDGCKATLATALAPAKLSCMSVFHDFIRCRDPADGGAGGGG-NNLPCQKEKQKIFECLQAHLAPYGFSDEEIFRLIYNTQQQPPPQSKPSVEVSDHGREGEEKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQGEGGAR 202
            MSGERAKLVVLGLVLAVIARSYI+SDVFTRG MMSSTLGFFED+LCK RPPADRDGCKATLATALAPAKLSCMSVFHDF+RCRDPADGG      NNLPCQKE QKIFECLQAHLAPYGFSDEEIFRLIY TQQQPPP SKPSVEVSDHGREG+EKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQG GGAR
Sbjct:    1 MSGERAKLVVLGLVLAVIARSYIMSDVFTRGYMMSSTLGFFEDNLCKGRPPADRDGCKATLATALAPAKLSCMSVFHDFVRCRDPADGGXXXXXRNNLPCQKENQKIFECLQAHLAPYGFSDEEIFRLIYKTQQQPPPPSKPSVEVSDHGREGDEKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQGGGGAR 203
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BLAST of mRNA_E-siliculosus-1a_F_contig1274.1679.1 vs. uniprot
Match: A0A6H5L454_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L454_9PHAE)

HSP 1 Score: 308 bits (788), Expect = 1.820e-104
Identity = 161/202 (79.70%), Postives = 173/202 (85.64%), Query Frame = 0 
Query:    1 MSGERAKLVVLGLVLAVIARSYIISDVFTRGIMMSSTLGFFEDSLCKARPPADRDGCKATLATALAPAKLSCMSVFHDFIRCRDPADGGAGGGGNNLPCQKEKQKIFECLQAHLAPYGFSDEEIFRLIYNTQQQPPPQSKPSVEVSDHGREGEEKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQGEGGAR 202
            MSGERAKLV LGLVLAVIARSYI SDVFT G+MMSST  FFED+LC+ R PADRD CKATLAT LAPAKLSCMS FHDF+ C+ PA+GG  G GN   CQKE+QK FECLQAHL P+GFSDEEI RL+Y TQQQPPPQSKPSVEVSDH REG+EKAK NEKPGEG+NAGGK  NRG+ET VEKGGPKVE EHEPKQG GGAR
Sbjct:    1 MSGERAKLVGLGLVLAVIARSYIKSDVFTHGVMMSSTARFFEDNLCEGRQPADRDDCKATLATVLAPAKLSCMSAFHDFVLCQHPAEGG--GDGNKRRCQKEQQKRFECLQAHLRPHGFSDEEIIRLLYKTQQQPPPQSKPSVEVSDHVREGDEKAKVNEKPGEGENAGGKGVNRGDETVVEKGGPKVEEEHEPKQGGGGAR 200
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1274.1679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI02_ECTSI6.650e-12692.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L454_9PHAE1.820e-10479.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..202
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableTMHMMTMhelixcoord: 7..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1274contigE-siliculosus-1a_F_contig1274:13848..16697 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1274.1679.1mRNA_E-siliculosus-1a_F_contig1274.1679.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1274 13848..16697 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1274.1679.1 ID=prot_E-siliculosus-1a_F_contig1274.1679.1|Name=mRNA_E-siliculosus-1a_F_contig1274.1679.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=203bp
MSGERAKLVVLGLVLAVIARSYIISDVFTRGIMMSSTLGFFEDSLCKARP
PADRDGCKATLATALAPAKLSCMSVFHDFIRCRDPADGGAGGGGNNLPCQ
KEKQKIFECLQAHLAPYGFSDEEIFRLIYNTQQQPPPQSKPSVEVSDHGR
EGEEKAKANEKPGEGDNAGGKSANRGEETDVEKGGPKVEVEHEPKQGEGG
AR*
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