prot_E-siliculosus-1a_F_contig127.1656.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig127.1656.1
Unique Nameprot_E-siliculosus-1a_F_contig127.1656.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length224
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig127.1656.1 vs. uniprot
Match: D7G1F2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F2_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 9.550e-115
Identity = 189/220 (85.91%), Postives = 195/220 (88.64%), Query Frame = 0 
Query:    1 LEQGHRDAETGRREAESRLRRLQXXXXXXXXAALRMRENTTAAGASAVAISKKFRADAFDSVRQIGELRARLRDKRGELESAEEEKRELDVEISNKKATRDKVKAEVASQMEAIAISCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMVPSRDQGRNSNXXXXHGIGNGRYRVNGGLSLCC 220
            LEQGH DAETGRREAE RLRRLQ        AA RMRENTTAAGASAVAISK+FRADAFD VRQIGELRARLRDKRGELESAEE+KRELDVEISNKKATRD VKAEV SQ+EA+A+SCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEG +P Q  MV SRDQGRNSN    H IGNGRYRVNGG SLCC
Sbjct:   63 LEQGHEDAETGRREAEGRLRRLQMQQARRKQAAARMRENTTAAGASAVAISKRFRADAFDRVRQIGELRARLRDKRGELESAEEDKRELDVEISNKKATRDTVKAEVTSQLEAVALSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGGNPAQSHMVSSRDQGRNSNNNNAHRIGNGRYRVNGGWSLCC 282
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig127.1656.1 vs. uniprot
Match: A0A6H5KAN2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAN2_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 6.830e-64
Identity = 113/131 (86.26%), Postives = 119/131 (90.84%), Query Frame = 0 
Query:   81 SAEEEKRELDVEISNKKATRDKVKAEVASQMEAIAISCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMVPSRDQGRNSNXXXXHGIGNGRYR 211
            SAEEEKRELDVEI NKKATRDKVKAEVAS++EA+  SCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELR+LKRELEGD+PGQP M+ SRDQG NSN    HGIGNG  R
Sbjct:   21 SAEEEKRELDVEIGNKKATRDKVKAEVASRLEAVTTSCSKVDDIDRENKSLLARAKRVEGEIDEIREAQEEMQEMAVGLQRKNAILRHELRYLKRELEGDNPGQPHMLSSRDQGCNSNNISAHGIGNGSQR 151
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig127.1656.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1F2_ECTSI9.550e-11585.91Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KAN2_9PHAE6.830e-6486.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 65..106
NoneNo IPR availableCOILSCoilCoilcoord: 5..32
NoneNo IPR availableCOILSCoilCoilcoord: 121..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig127contigE-siliculosus-1a_F_contig127:19579..22144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig127.1656.1mRNA_E-siliculosus-1a_F_contig127.1656.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig127 19579..22144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig127.1656.1 ID=prot_E-siliculosus-1a_F_contig127.1656.1|Name=mRNA_E-siliculosus-1a_F_contig127.1656.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=224bp
LEQGHRDAETGRREAESRLRRLQQQQARRKQAALRMRENTTAAGASAVAI
SKKFRADAFDSVRQIGELRARLRDKRGELESAEEEKRELDVEISNKKATR
DKVKAEVASQMEAIAISCSKVDDIDRENKSLLARAKRVEGEIDEIREAQE
EMQEMAVGLQRKNAILRHELRHLKRELEGDSPGQPRMVPSRDQGRNSNNN
NAHGIGNGRYRVNGGLSLCCWCW*
back to top