prot_E-siliculosus-1a_F_contig1268.1646.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1268.1646.1
Unique Name	prot_E-siliculosus-1a_F_contig1268.1646.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	243

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1268.1646.1 vs. uniprot
Match: D8LLF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLF5_ECTSI)

HSP 1 Score: 338 bits (866), Expect = 4.870e-115
Identity = 238/242 (98.35%), Postives = 241/242 (99.59%), Query Frame = 0

Query:    1 MEHVMSKFIKRRNRPSFEPKADKXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDPYGRLCWQHRKTGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXXXPVPALAPVAVVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 242
            MEHVMSKFIKRRNRPSFEPKADKXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDPYGRLCWQHR+TGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXX PVPALAPVAVVPPPQPYMQQPQYGISPVP+QYYGHSPVPYG+SPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY
Sbjct:    1 MEHVMSKFIKRRNRPSFEPKADKXXXXXXXXXXXXXXXXXXXXXXXXXXXRTDPYGRLCWQHRQTGQVTYGTSYALHQQGYNTGLAAKGFDSDXXXXXXXXXXXXXXXXXX-PVPALAPVAVVPPPQPYMQQPQYGISPVPRQYYGHSPVPYGMSPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 241

[Close]

BLAST of mRNA_E-siliculosus-1a_F_contig1268.1646.1 vs. uniprot
Match: A0A6H5KIW0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW0_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 1.820e-70
Identity = 152/157 (96.82%), Postives = 154/157 (98.09%), Query Frame = 0

Query:   86 AAKGFDSDXXXXXXXXXXXXXXXXXXXPVPALAPVAVVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY 242
            AAKGFDSDXXXXXXXXXXXXXXXXXX PVPALAPVA+VPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPW+AMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAG WEKLYTRDGGKFWQHSVTGE SKTDPYY
Sbjct:   27 AAKGFDSDXXXXXXXXXXXXXXXXXX-PVPALAPVALVPPPQPYMQQPQYGISPVPQQYYGHSPVPYGVSPVAMYPAAPWSAMPASPVPVQVPEYIKRQHAEALKAKXXXXXXXXXXXXXXXXXIAAGAWEKLYTRDGGKFWQHSVTGEISKTDPYY 182

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1268.1646.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1268.1646.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LLF5_ECTSI	4.870e-115	98.35	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KIW0_9PHAE	1.820e-70	96.82	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 181..209
None	No IPR available	COILS	Coil	Coil	coord: 21..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1268	contig	E-siliculosus-1a_F_contig1268:24100..28053 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1268.1646.1	mRNA_E-siliculosus-1a_F_contig1268.1646.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1268 23829..28053 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1268.1646.1 ID=prot_E-siliculosus-1a_F_contig1268.1646.1|Name=mRNA_E-siliculosus-1a_F_contig1268.1646.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=243bp
MEHVMSKFIKRRNRPSFEPKADKKETKKEETKKAEESSEDEEETEQQWEQ
RTDPYGRLCWQHRKTGQVTYGTSYALHQQGYNTGLAAKGFDSDDDDDDDK
KPAAAAAAAAAAPVPALAPVAVVPPPQPYMQQPQYGISPVPQQYYGHSPV
PYGVSPVAMYPAAPWNAMPASPVPVQVPEYIKRQHAEALKAKKKKEEEEK
KKKAAEKKKIAAGVWEKLYTRDGGKFWQHSVTGETSKTDPYY*