prot_E-siliculosus-1a_F_contig12678.1642.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12678.1642.1
Unique Nameprot_E-siliculosus-1a_F_contig12678.1642.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length85
Homology
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12678.1642.1 vs. uniprot
Match: A0A6H5K335_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K335_9PHAE)

HSP 1 Score: 166 bits (419), Expect = 6.690e-46
Identity = 83/84 (98.81%), Postives = 83/84 (98.81%), Query Frame = 0 
Query:    1 MLAEQPRAGLSEGPERYLAKGVRAPTKVPGFFLAGEDLTISGMEGGVMGGWIAAHAALGYTPTDMFLRRRSLASDIPNLDKLRR 84
            MLAEQPRAGLSEGPERYLAKGVRAPTKVPG FLAGEDLTISGMEGGVMGGWIAAHAALGYTPTDMFLRRRSLASDIPNLDKLRR
Sbjct:  750 MLAEQPRAGLSEGPERYLAKGVRAPTKVPGLFLAGEDLTISGMEGGVMGGWIAAHAALGYTPTDMFLRRRSLASDIPNLDKLRR 833
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig12678.1642.1 vs. uniprot
Match: A0A835Z712_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z712_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 1.490e-12
Identity = 37/73 (50.68%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:    7 RAGLSEGPERYLAKGVRAPTKVPGFFLAGEDLTISGMEGGVMGGWIAAHAALGYTPTDMFLRRRSLASDIPNL 79
            R GLS    R  A G+RAPT VPG FLA  DL  +   GG+   WIA HA LGYTP D  + +R+L SD+  L
Sbjct:  664 RPGLSATCARAAAPGLRAPTHVPGLFLASADLCENSFAGGLDAAWIATHAVLGYTPFDFLILKRTLLSDLETL 736
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12678.1642.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K335_9PHAE6.690e-4698.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z712_9STRA1.490e-1250.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12678contigE-siliculosus-1a_F_contig12678:698..1345 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12678.1642.1mRNA_E-siliculosus-1a_F_contig12678.1642.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12678 698..1345 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12678.1642.1 ID=prot_E-siliculosus-1a_F_contig12678.1642.1|Name=mRNA_E-siliculosus-1a_F_contig12678.1642.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=85bp
MLAEQPRAGLSEGPERYLAKGVRAPTKVPGFFLAGEDLTISGMEGGVMGG
WIAAHAALGYTPTDMFLRRRSLASDIPNLDKLRR*
back to top