prot_E-siliculosus-1a_F_contig12658.1635.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12658.1635.1
Unique Nameprot_E-siliculosus-1a_F_contig12658.1635.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length128
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12658.1635.1 vs. uniprot
Match: D8LFQ3_ECTSI (Ubiquitin carboxyl-terminal hydrolase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ3_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 7.750e-71
Identity = 120/127 (94.49%), Postives = 123/127 (96.85%), Query Frame = 0 
Query:    1 MQGKKMHSSGGSRGPGAAAKTDVAINAYRTLIVSSRHRSYVKEDGTVRTSARRRSETKWFAYKDVRGTNGGKDIFGLKQFDTHGKEKNLSYPSDASGKDLSGFMGLGESNRLFEGGLQTYARCAAST 127
            MQGKKMHSSGGSRGPGAAAKT V INAYRTLIVSSRHRSYVKEDGTVRTSARRRSE+KWFAYKDVRG NGGKDIFGLKQFDT+GKE+NLSYPSDASGKDLSGFMGLGESNRLFEG LQTYARCAAST
Sbjct: 1008 MQGKKMHSSGGSRGPGAAAKTYVDINAYRTLIVSSRHRSYVKEDGTVRTSARRRSESKWFAYKDVRGINGGKDIFGLKQFDTNGKERNLSYPSDASGKDLSGFMGLGESNRLFEGDLQTYARCAAST 1134
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12658.1635.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFQ3_ECTSI7.750e-7194.49Ubiquitin carboxyl-terminal hydrolase family prote... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12658contigE-siliculosus-1a_F_contig12658:189..572 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12658.1635.1mRNA_E-siliculosus-1a_F_contig12658.1635.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12658 180..1106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12658.1635.1 ID=prot_E-siliculosus-1a_F_contig12658.1635.1|Name=mRNA_E-siliculosus-1a_F_contig12658.1635.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=128bp
MQGKKMHSSGGSRGPGAAAKTDVAINAYRTLIVSSRHRSYVKEDGTVRTS
ARRRSETKWFAYKDVRGTNGGKDIFGLKQFDTHGKEKNLSYPSDASGKDL
SGFMGLGESNRLFEGGLQTYARCAAST*
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