prot_E-siliculosus-1a_F_contig1262.1620.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female
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Overview
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: D7FXS6_ECTSI (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS6_ECTSI) HSP 1 Score: 181 bits (458), Expect = 1.270e-57 Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT
Sbjct: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A7S2FJT0_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJT0_9STRA) HSP 1 Score: 162 bits (409), Expect = 6.200e-50 Identity = 81/93 (87.10%), Postives = 89/93 (95.70%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
++ SVEEPLDLIRLSLDERI+VKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPP+RTT
Sbjct: 17 VTMSVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQEIDEDTSEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 109
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A7S2GP21_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GP21_9STRA) HSP 1 Score: 160 bits (406), Expect = 1.430e-49 Identity = 81/90 (90.00%), Postives = 87/90 (96.67%), Query Frame = 0
Query: 4 SVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
SVEEPLDLIRLSLDERI+VKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPP+RTT
Sbjct: 13 SVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQELDEDTNEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 102
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A4D9CUN8_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUN8_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.480e-47 Identity = 75/92 (81.52%), Postives = 90/92 (97.83%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 92
MSSSV+EPLDLIRLSL+ERI+VKCRGERELRGKLH++D+HLNM+LG+VEETVTT E+DE+T EEI+RTS+R++EMLFVRGDVVILVSPP+RT
Sbjct: 1 MSSSVDEPLDLIRLSLEERIYVKCRGERELRGKLHAFDRHLNMILGEVEETVTTPEIDEETDEEIIRTSRRTVEMLFVRGDVVILVSPPLRT 92
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A0M0JVC1_9EUKA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVC1_9EUKA) HSP 1 Score: 154 bits (388), Expect = 6.230e-47 Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 0
Query: 2 SSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 92
S+ V+EP+DL+RLSLDERIHVK RG+RELRGKLH+YDQHLNMVLGDVEE VTTVEVDE+TYEEI++TSKR IEMLFVRGD VIL+SPP+RT
Sbjct: 3 STLVKEPIDLVRLSLDERIHVKMRGDRELRGKLHAYDQHLNMVLGDVEEVVTTVEVDEETYEEIIKTSKRQIEMLFVRGDGVILISPPLRT 93
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: L8HA54_ACACA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA54_ACACA) HSP 1 Score: 150 bits (378), Expect = 2.750e-45 Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 92
+ S+VEEPLDLIRLSLD+RI+VK RGERELRGKLH+YDQHLNMVLGDVEETVTTVE+DE+T EEI++ KR++EMLFVRGD VILVSPPVRT
Sbjct: 11 LGSTVEEPLDLIRLSLDDRIYVKLRGERELRGKLHAYDQHLNMVLGDVEETVTTVEMDEETDEEIIKRRKRTVEMLFVRGDGVILVSPPVRT 102
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: K3ZB54_SETIT (U6 snRNA-associated Sm-like protein LSm3 n=9 Tax=Poaceae TaxID=4479 RepID=K3ZB54_SETIT) HSP 1 Score: 149 bits (375), Expect = 6.560e-45 Identity = 74/89 (83.15%), Postives = 84/89 (94.38%), Query Frame = 0
Query: 4 SVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 92
+V+EPLDLIRLSLDERI+VK R ERELRGKLH+YDQHLNM+LGDVEETVTTVE+D++TYEEIVRTSKR+I LFVRGD VILVSPP+RT
Sbjct: 8 AVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEETVTTVEIDDETYEEIVRTSKRTIPFLFVRGDGVILVSPPLRT 96
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: T1JAU3_STRMM (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JAU3_STRMM) HSP 1 Score: 148 bits (374), Expect = 1.120e-44 Identity = 72/92 (78.26%), Postives = 87/92 (94.57%), Query Frame = 0
Query: 2 SSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
S++VEEPLDLIRLSLDERI+VK R ERELRG+LH+YDQHLNM+LGDVEETVTTVE+DE+TYEE+ +T+KR+I MLFVRGD VILVSPP+R++
Sbjct: 11 SNTVEEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEVYKTTKRNIPMLFVRGDGVILVSPPMRSS 102
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: R1DJQ4_EMIHU (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Eukaryota TaxID=2759 RepID=R1DJQ4_EMIHU) HSP 1 Score: 148 bits (373), Expect = 1.170e-44 Identity = 72/93 (77.42%), Postives = 87/93 (93.55%), Query Frame = 0
Query: 1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
MSS V EPLDL+RLSLDERI VK RG+R+LRG+LH++DQHLNMVLG+VEETVTT+EVDE+TYEEI++TSKR I+MLFVRGD V+LVSPP+RT+
Sbjct: 1 MSSVVAEPLDLVRLSLDERILVKLRGDRDLRGRLHAFDQHLNMVLGEVEETVTTIEVDEETYEEIIKTSKRQIDMLFVRGDGVVLVSPPLRTS 93
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A383W7B2_TETOB (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W7B2_TETOB) HSP 1 Score: 148 bits (373), Expect = 1.250e-44 Identity = 69/90 (76.67%), Postives = 86/90 (95.56%), Query Frame = 0
Query: 3 SSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 92
++V+EPLDLI+LSLDERI+VKCRGERELRG+LH+YDQHLNM+LG+VEETVTTVE+D++TYEEI++T KRSI LFVRGD VIL+SPP+R+
Sbjct: 6 ATVKEPLDLIKLSLDERIYVKCRGERELRGRLHAYDQHLNMILGEVEETVTTVEIDDETYEEIIKTQKRSIPFLFVRGDSVILISPPLRS 95 The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_E-siliculosus-1a_F_contig1262.1620.1 ID=prot_E-siliculosus-1a_F_contig1262.1620.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1620.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=94bpback to top |