mRNA_E-siliculosus-1a_F_contig1262.1620.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig1262.1620.1
Unique NamemRNA_E-siliculosus-1a_F_contig1262.1620.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: D7FXS6_ECTSI (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXS6_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 5.330e-53
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 1 
Query:   67 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 345
            MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT
Sbjct:    1 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 93
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A7S2GP21_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GP21_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.100e-45
Identity = 83/98 (84.69%), Postives = 89/98 (90.82%), Query Frame = 1 
Query:   52 FKAADMSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 345
            F  A    SVEEPLDLIRLSLDERI+VKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPP+RTT
Sbjct:    5 FTLAKEMGSVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQELDEDTNEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 102
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A7S2FJT0_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FJT0_9STRA)

HSP 1 Score: 160 bits (405), Expect = 1.370e-45
Identity = 81/98 (82.65%), Postives = 91/98 (92.86%), Query Frame = 1 
Query:   52 FKAADMSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 345
            ++   ++ SVEEPLDLIRLSLDERI+VKCRG+RELRGKLH+YDQHLNMVLGDVEETVTT E+DEDT EEI+RTSKR IEMLFVRGDVVILVSPP+RTT
Sbjct:   12 WREVTVTMSVEEPLDLIRLSLDERIYVKCRGDRELRGKLHAYDQHLNMVLGDVEETVTTQEIDEDTSEEIIRTSKRMIEMLFVRGDVVILVSPPLRTT 109
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A4D9CUN8_9STRA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUN8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.080e-43
Identity = 75/92 (81.52%), Postives = 90/92 (97.83%), Query Frame = 1 
Query:   67 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 342
            MSSSV+EPLDLIRLSL+ERI+VKCRGERELRGKLH++D+HLNM+LG+VEETVTT E+DE+T EEI+RTS+R++EMLFVRGDVVILVSPP+RT
Sbjct:    1 MSSSVDEPLDLIRLSLEERIYVKCRGERELRGKLHAFDRHLNMILGEVEETVTTPEIDEETDEEIIRTSRRTVEMLFVRGDVVILVSPPLRT 92
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A0M0JVC1_9EUKA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JVC1_9EUKA)

HSP 1 Score: 152 bits (383), Expect = 1.660e-42
Identity = 75/91 (82.42%), Postives = 86/91 (94.51%), Query Frame = 1 
Query:   70 SSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 342
            S+ V+EP+DL+RLSLDERIHVK RG+RELRGKLH+YDQHLNMVLGDVEE VTTVEVDE+TYEEI++TSKR IEMLFVRGD VIL+SPP+RT
Sbjct:    3 STLVKEPIDLVRLSLDERIHVKMRGDRELRGKLHAYDQHLNMVLGDVEEVVTTVEVDEETYEEIIKTSKRQIEMLFVRGDGVILISPPLRT 93
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: K3ZB54_SETIT (U6 snRNA-associated Sm-like protein LSm3 n=9 Tax=Poaceae TaxID=4479 RepID=K3ZB54_SETIT)

HSP 1 Score: 149 bits (377), Expect = 1.430e-41
Identity = 76/95 (80.00%), Postives = 87/95 (91.58%), Query Frame = 1 
Query:   58 AADMSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 342
            AA+   +V+EPLDLIRLSLDERI+VK R ERELRGKLH+YDQHLNM+LGDVEETVTTVE+D++TYEEIVRTSKR+I  LFVRGD VILVSPP+RT
Sbjct:    2 AAEEDMAVKEPLDLIRLSLDERIYVKLRSERELRGKLHAYDQHLNMILGDVEETVTTVEIDDETYEEIVRTSKRTIPFLFVRGDGVILVSPPLRT 96
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BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: L8HA54_ACACA (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HA54_ACACA)

HSP 1 Score: 148 bits (373), Expect = 6.780e-41
Identity = 75/92 (81.52%), Postives = 86/92 (93.48%), Query Frame = 1 
Query:   67 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 342
            + S+VEEPLDLIRLSLD+RI+VK RGERELRGKLH+YDQHLNMVLGDVEETVTTVE+DE+T EEI++  KR++EMLFVRGD VILVSPPVRT
Sbjct:   11 LGSTVEEPLDLIRLSLDDRIYVKLRGERELRGKLHAYDQHLNMVLGDVEETVTTVEMDEETDEEIIKRRKRTVEMLFVRGDGVILVSPPVRT 102
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: A0A2G5DC99_AQUCA (U6 snRNA-associated Sm-like protein LSm3 n=3 Tax=Ranunculaceae TaxID=3440 RepID=A0A2G5DC99_AQUCA)

HSP 1 Score: 147 bits (371), Expect = 1.120e-40
Identity = 71/95 (74.74%), Postives = 89/95 (93.68%), Query Frame = 1 
Query:   58 AADMSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRT 342
            A++  S+V+EPLDLIRLSLDERI+VK R +RELRG+LH+YDQHLNM+LGDVEET+TTVE+D++TYEEIVRT+KR+++ LFVRGD VILVSPP+RT
Sbjct:    2 ASEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGRLHAYDQHLNMILGDVEETITTVEIDDETYEEIVRTTKRNVQFLFVRGDGVILVSPPLRT 96
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: T1JAU3_STRMM (U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JAU3_STRMM)

HSP 1 Score: 146 bits (369), Expect = 2.670e-40
Identity = 72/92 (78.26%), Postives = 87/92 (94.57%), Query Frame = 1 
Query:   70 SSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 345
            S++VEEPLDLIRLSLDERI+VK R ERELRG+LH+YDQHLNM+LGDVEETVTTVE+DE+TYEE+ +T+KR+I MLFVRGD VILVSPP+R++
Sbjct:   11 SNTVEEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMILGDVEETVTTVEIDEETYEEVYKTTKRNIPMLFVRGDGVILVSPPMRSS 102
[Close]
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Match: R1DJQ4_EMIHU (U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=Eukaryota TaxID=2759 RepID=R1DJQ4_EMIHU)

HSP 1 Score: 146 bits (368), Expect = 2.780e-40
Identity = 72/93 (77.42%), Postives = 87/93 (93.55%), Query Frame = 1 
Query:   67 MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEETVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT 345
            MSS V EPLDL+RLSLDERI VK RG+R+LRG+LH++DQHLNMVLG+VEETVTT+EVDE+TYEEI++TSKR I+MLFVRGD V+LVSPP+RT+
Sbjct:    1 MSSVVAEPLDLVRLSLDERILVKLRGDRDLRGRLHAFDQHLNMVLGEVEETVTTIEVDEETYEEIIKTSKRQIDMLFVRGDGVVLVSPPLRTS 93
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1262.1620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXS6_ECTSI5.330e-53100.00U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=E... [more]
A0A7S2GP21_9STRA1.100e-4584.69U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=D... [more]
A0A7S2FJT0_9STRA1.370e-4582.65U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=F... [more]
A0A4D9CUN8_9STRA4.080e-4381.52U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=N... [more]
A0A0M0JVC1_9EUKA1.660e-4282.42U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=C... [more]
K3ZB54_SETIT1.430e-4180.00U6 snRNA-associated Sm-like protein LSm3 n=9 Tax=P... [more]
L8HA54_ACACA6.780e-4181.52U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=A... [more]
A0A2G5DC99_AQUCA1.120e-4074.74U6 snRNA-associated Sm-like protein LSm3 n=3 Tax=R... [more]
T1JAU3_STRMM2.670e-4078.26U6 snRNA-associated Sm-like protein LSm3 n=1 Tax=S... [more]
R1DJQ4_EMIHU2.780e-4077.42U6 snRNA-associated Sm-like protein LSm3 n=2 Tax=E... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1262contigE-siliculosus-1a_F_contig1262:24512..28380 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start1
Stop1
Cds size282
Model size1049
Exons3
Ec32 orthologEc-03_001640.1
Ec32 ortholog descriptionU6 snRNA-associated Sm-like protein LSm3
Hectar predicted targeting categoryother localisation
Best eggNOG OGNA|NA|NA
Best tax levelEukaryota
BRITEko00000,ko00001,ko00002,ko03019,ko03041
COG Functional cat.J
EggNOG OGsKOG3460@1,KOG3460@2759
EggNOG free text desc.cytoplasmic mRNA processing body assembly
GOsGO:0000288,GO:0000291,GO:0000375,GO:0000377,GO:0000398,GO:0000781,GO:0000932,GO:0000956,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005688,GO:0005694,GO:0005697,GO:0005730,GO:0005732,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008380,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0017069,GO:0017070,GO:0019222,GO:0019439,GO:0022607,GO:0022613,GO:0022618,GO:0030532,GO:0030629,GO:0031974,GO:0031981,GO:0032991,GO:0033962,GO:0034470,GO:0034622,GO:0034641,GO:0034655,GO:0034660,GO:0035770,GO:0036464,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043928,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045292,GO:0046483,GO:0046540,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0070034,GO:0070925,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0098687,GO:0120114,GO:0120115,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1902494,GO:1990726,GO:1990904
KEGG ModuleM00354,M00396,M00397
KEGG Pathwayko03018,ko03040,map03018,map03040
KEGG koko:K12622
Preferred nameLSM3
Seed eggNOG ortholog2880.D7FXS6
Seed ortholog evalue3.3e-43
Seed ortholog score180.6
Taxonomic scopeEukaryota
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1262.1620.1prot_E-siliculosus-1a_F_contig1262.1620.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig1262 25213..28314 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927784.616072-UTR-E-siliculosus-1a_F_contig1262:24511..252121622927784.616072-UTR-E-siliculosus-1a_F_contig1262:24511..25212Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1262 24512..25212 -
1696318679.0633883-UTR-E-siliculosus-1a_F_contig1262:24511..252121696318679.0633883-UTR-E-siliculosus-1a_F_contig1262:24511..25212Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1262 24512..25212 -
1622927784.6644287-UTR-E-siliculosus-1a_F_contig1262:28314..283801622927784.6644287-UTR-E-siliculosus-1a_F_contig1262:28314..28380Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1262 28315..28380 -
1696318679.1027262-UTR-E-siliculosus-1a_F_contig1262:28314..283801696318679.1027262-UTR-E-siliculosus-1a_F_contig1262:28314..28380Ectocarpus siliculosus Ec863f_EcPH12_90f femaleUTRE-siliculosus-1a_F_contig1262 28315..28380 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927784.6293845-CDS-E-siliculosus-1a_F_contig1262:25212..252931622927784.6293845-CDS-E-siliculosus-1a_F_contig1262:25212..25293Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 25213..25293 -
1696318679.075256-CDS-E-siliculosus-1a_F_contig1262:25212..252931696318679.075256-CDS-E-siliculosus-1a_F_contig1262:25212..25293Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 25213..25293 -
1622927784.639919-CDS-E-siliculosus-1a_F_contig1262:26422..265181622927784.639919-CDS-E-siliculosus-1a_F_contig1262:26422..26518Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 26423..26518 -
1696318679.084566-CDS-E-siliculosus-1a_F_contig1262:26422..265181696318679.084566-CDS-E-siliculosus-1a_F_contig1262:26422..26518Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 26423..26518 -
1622927784.650101-CDS-E-siliculosus-1a_F_contig1262:28209..283141622927784.650101-CDS-E-siliculosus-1a_F_contig1262:28209..28314Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 28210..28314 -
1696318679.0928304-CDS-E-siliculosus-1a_F_contig1262:28209..283141696318679.0928304-CDS-E-siliculosus-1a_F_contig1262:28209..28314Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig1262 28210..28314 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig1262.1620.1

>prot_E-siliculosus-1a_F_contig1262.1620.1 ID=prot_E-siliculosus-1a_F_contig1262.1620.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1620.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=94bp
MSSSVEEPLDLIRLSLDERIHVKCRGERELRGKLHSYDQHLNMVLGDVEE
TVTTVEVDEDTYEEIVRTSKRSIEMLFVRGDVVILVSPPVRTT*
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mRNA from alignment at E-siliculosus-1a_F_contig1262:24512..28380-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig1262.1620.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1620.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1620.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=3869bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:24512..28380- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
GCGAGGTGGTCATCAGCCATCCACGCCCAGAGTTACCAACATACCTACGA
GTTCAAGGCGGCAGACATGTCTTCTTCTGTTGAGGAGCCACTGGATCTGA
TTCGACTGTCTCTCGATGAGAGGATCCACGTCAAATGCCGCGGAGAGCGG
GAGCTAAGGGGCAAGCTGCACGTACGTGAGGTTTGCTCGTACACACCGCT
GTTGTAGCACGAAATCGCGATCATTTGTCAACGACATGTTCGAGCTGCAC
TCCATGGATGTGTTGATGTGTTGATTACGACAACAACCTTGCACAGCGAC
GGGGGAGCGGATCAAATCGTTCCGCTTGCTTCTGCGTGACATTTTTCTAC
TTTTTAAAAACTACTGGTATTACCGTAGACAACACAGGATAACGCACCCC
GGTGATAACATTTTGGGCTTTCAAAATATTATCACCGGGTGTGGTATCCC
GTGGGGGGGGGTGGTATCTTATCTAGCCCGGGTGATATAGGGCAGGGCCC
TTAAGAGGGTGTGATAAACCAGGGGGTGTGATAGCACGTCCGAACACGAA
CAGGGTGTGTTTGGGGTGTGATAAATGAGGGGGTAAGGAGGTGTGCTGGC
ACGTCCGAATACCCACAGGGTGTGTTTTGGGTGATGTGACAATAATGAGG
GTGTGTGATAGAAAGGTGTTACACTTCTTGAAGAGTTAAACCGCTGCTGC
CGCACACTTGGTTGGTATTGCGGGGGTGTGATAGCAATGCCTGTACGAAC
ACTACATGACTTGTGGTTCTGCGGAATGTGGTAACACAAAGGAGCTCAAC
GGAGGTGACGAAACTCCTTAGCACATGACTCGGTGGCCACAGAGTGTGCG
CCATCCGTCCTGCCCCCTCACACAAAAACGTAGGCTCCTGCATACCTTGC
TATTGGGTACGACCAAAAGAGAGTTACGCAGATGTTCTGTGTGTGAGATA
CCCACATGCCCACGCGGCAGAGGTTGTATCACCCCCGTGATAGACGGAGG
AGCCTGCGACGTAACCTCAAGGGGTGTGTTATCTTATGTAGCCCCGGTGA
TAAATCGATGGTTTGTCAGAAACACCGAAAATTATCACCGGGGTGTCGTA
TTCTGTGGGGGGTGCGGTTTCTTATGTGGGTGTGTTATCTTGTGTCGTCT
ACGGTATGTTTCTTTCGAGTGCTGTGTAGCCTACTGGGTTGCATCAGGGC
ACAGACTACAGGTACAACATCAGTACTTTCGGATGACATTGCTGTGCACG
AGGCCTTTGCTGCACACAGCTGTCGCAGGCAGAAAGCTACAGCAAGTAGT
CGCTACAACCAAATCCTCTAGCAGCTTTGCGTCGATTTGCCTCCCCTTCC
CGGCTCTCGTGGCAGCTCTCTGTACCTCCTCCGTCTGCCGCGGCTCCACT
CAATGTTGCCATACCGGTGAAGCCGCTGTCTGCTGTTTCTACCAGCGGGG
TCTGTCGGCGATACCTCTGGTTATCGAGTTGTGTACACTATGTATACTGT
ACTTGTAGTCTCCGATCAACCGAACAATCATCAAGGTTCACATTCCGCTG
TGCGTCGGAGCAGGACTCTGTTGATTAGCTGCTTGCTGGATGATCTGCAT
TCGGGAACCTGTGCCAGAACCAATCCCTTTTGCAGGAAACGTTGCGCAAG
CAGGCTCAATTCAGCGACCAACCCTTCGGTTTGCATTCTTGCTTCTTCTC
GAGGGAAGCGTGTTGCATGTTTCTCCCTCTTAGCCCCCTTTCACTTTGAA
CCCAGCCCTCCCTTCCCTCCCCCCCCCCCTCCTATTTTTTCGTGTGTTTT
GTGTGCGCATGTGTACCCACCCACCCCTTCGTAACCCGTGCGCCTTGGTT
ATTTCTCGGCAGTCGTACGACCAGCACTTGAACATGGTGTTGGGTGATGT
GGAAGAAACGGTGACCACGGTGGAGGTGGACGAGGACACCTACGAGGAGA
TCGTTAGGGTAAGAGAAAATCGACTTACAGGCTGGGCGTGTGCTGATGTT
TTGCATGTCTTAGCGGATACACCGTTGACCACGCGCCCTCGAGAGAGGAC
GGAGCATTGTTTCCGCAGGACCGATCACCGATGGCCAATCGCATCACCGA
TGACCAATCGTTATTTCCTACTCTGCCAAGGGTTAGGGGGGTCTCGTTTT
GGTGTGGTTGGCTCGCTTGCCATTGGAGAGGAACACAGACACCCGTCGCT
TCCTTGTTTTGTCTGGGACGAGGACGACTCGTTGATTGGTCATGACACTG
CTGTGTGTGTCGATTCGTTCGGTACTGTCGTCAACAAGGAAGCATGCTGA
AATGTTTGTGATATGATACTATAATAAATGTCGCGAAAGAGCGGAACACA
TACCAGTGTGATCTGGAGCGAGGAGAGGCAGTGAGTGAGGTGGGCTGGGA
CATGTGAGCGAAGCGCAGGGGGGCCGGGTTTAGGGGCCGAAGACGCTGTG
AGCCGATCAATGCATTTCCTGTTGCAGTGGACCAGCGTCCCCCCGTGCTC
CTGACGCAAGTCACCACGTTCCCGGGCGTTGAAAACTCACAACGTGGTTT
TCCTTGTGCTACAGAACTAGACAAATATTGCTTCGTTGTTGTGGGTCCTG
TCTAGACTACTGTGTACCGTTTCGTCCAGGAATGCGTTCCGTTCCCCTGA
CAAGACGCTGCCCAAGGGCGGAGGCAAGGGGGGGTAAAAAACGGCAACAG
CAGCAGTGGATAGAGTCGATAGCAAGGTTTTAAAGAGCCGGCAGAGTGTG
GGCCAGATTTTTCCTCTGTTGGTATTTTGTGCAAGCAAGCTTGACTGGCC
CTTTTTTTAATATATTTTTGGCTTGCTGCTGTCTTCCGTTGGATGACGCG
CGCGTGAAAGACACACTTTCCTCGTTTGTACGGTGAGATTTCGCATCTTC
TGCCGTACCCGCCAAGATTGTACAGCATTACACTCCGCGTCCCTCGAATC
TGCCACGCTTCAACACCCACCTCCCTGCTCCCGACTCTTTTTTCCTTCTC
CCTTATCCCCGCTCACTGCTGTGGCTCTTGCTGCATCCGCTGGCTGCGAC
GCCACTCGGCTTACTCGGGGCCCGACTCTGCCCGCAGACTTCAAAGCGAA
GTATCGAGATGCTCTTCGTGCGGGGGGACGTCGTAATCTTAGTCTCCCCG
CCGGTGCGCACAACATAGGGGGTCAGTTTTGCAGTGGTGGAGCAGATGCT
TGTTCTCTGGCGTGTTTCTTGGTTTTGCCCGCTAGACCATGAAGGACGAC
CCGCTCTCTCCCGCGAGACGTCCTCCTGTATTGGGCCAAAGTATTTTAAG
TGGGTTTTGTTTGTGCCATCTCGGGGTTTGACGTGAGCTTGGGGAGGTGG
GCGGCCGGAGCGAGGAATCTACTGGATCAAGATAGCACGCGTGCGCGCGC
GCGGGAAGGGCTAGATCATTTTTCTTGAGGGGTATGACACCTTTTTCTTG
GAAGCCGGGGAGGTTAATCAGGATTCGCTCTGGGGGGCGGTCTTGGTCCG
GCGTCAGCGGCTGCGAATGTTTCGTGCAGCACAACATACCTTTTCGTGTC
TGTTCATGGTTTAGTCATGGTATATTTCACAGCAATTCGGAGGGTTCACT
GGGTAATTGGCACTAGATATTGTACCTTCGACTGTGGGTTGTTTTTTGTG
TGTCTCGCGTGATACAGGTCGCCGTAAATTTTGGCTGGCGATGCTGGTTG
GATGGCATTTTCTGGTGTCCCTCCTCGGCCTGAGGAATCAAACAGATGTG
CCTACAGAGCGGCGACAGCAAGCGTCTCTGATGAATTGTCACTGCATGCT
CCCATACTTCCGCGATTTCGAAATGAGGTGAGGTGATGGCGCACATCTTT
CTCCTAAATAGATGCGGAG
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1262:24512..28380-

>mRNA_E-siliculosus-1a_F_contig1262.1620.1 ID=mRNA_E-siliculosus-1a_F_contig1262.1620.1|Name=mRNA_E-siliculosus-1a_F_contig1262.1620.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=564bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1262:24512..28380- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGTCTTCTTCTGTTGAGGAGCCACTGGATCTGATTCGACTGTCTCTCGA
TGAGAGGATCCACGTCAAATGCCGCGGAGAGCGGGAGCTAAGGGGCAAGC
TGCACATGTCTTCTTCTGTTGAGGAGCCACTGGATCTGATTCGACTGTCT
CTCGATGAGAGGATCCACGTCAAATGCCGCGGAGAGCGGGAGCTAAGGGG
CAAGCTGCACTCGTACGACCAGCACTTGAACATGGTGTTGGGTGATGTGG
AAGAAACGGTGACCACGGTGGAGGTGGACGAGGACACCTACGAGGAGATC
GTTAGGTCGTACGACCAGCACTTGAACATGGTGTTGGGTGATGTGGAAGA
AACGGTGACCACGGTGGAGGTGGACGAGGACACCTACGAGGAGATCGTTA
GGACTTCAAAGCGAAGTATCGAGATGCTCTTCGTGCGGGGGGACGTCGTA
ATCTTAGTCTCCCCGCCGGTGCGCACAACATAGACTTCAAAGCGAAGTAT
CGAGATGCTCTTCGTGCGGGGGGACGTCGTAATCTTAGTCTCCCCGCCGG
TGCGCACAACATAG
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