prot_E-siliculosus-1a_F_contig125.1552.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig125.1552.1
Unique Nameprot_E-siliculosus-1a_F_contig125.1552.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length396
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig125.1552.1 vs. uniprot
Match: A0A6H5KKK3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK3_9PHAE)

HSP 1 Score: 449 bits (1156), Expect = 3.210e-154
Identity = 281/370 (75.95%), Postives = 293/370 (79.19%), Query Frame = 0
Query:   22 AQVGPAGLDAYTREHKVCDGKKFPSTILPQHTEEPTKPSQRSNQTRQEVCDRLVSVIDEMRSVLVEVRENGGGGSLTTDLAARANVALSAVTSGTSAFGDMLRLERPFDIPPKPAGVMNPLAKTARESGKRKPLASDGNNRPKRSGSKAGAAAESGGANASVSKATGSGGTASLDTETSRKSKALKTTAKSAVKGNKFSSRASSXXXXXXXXXXAALASPDADGDTGTPSTLVSGGVQXXXXXXXXXRSGGAEDPIALSSSDEDAESNGARGSTESGAMEENGTAPVPAQAYSSGVLVDHNSAQQQQQGSQGKGTAGVRTETSENHLGAQAPSNPASATHGGXXXXXXAFSSPPLPADGRVGTSGRNITP 391
            A+ GPAGLDAYTREHK                          NQ RQEVCDRLVSVI EMRSVL+EVRENGGGG LTTDLAARAN+ALSAVT+GTSAFGDMLRLE+PFDIP KPAGVMNPLAKTARESGKRKP ASD NN PKRSGSKAGAAA SG ANAS  +ATGSGGTASLDTETSRK KALKTTAK+AVKG+K SSRASS          A LAS DADGDTGTPSTLVSGGVQ         RSG AEDPIALSS+DEDAESNGARGS ESGAMEENGTAPVPA+A  SGVLVDHNSAQQQ  G QG GTAGVRT T +N LGAQAPS  A ATHGG XXXXXAFSSPPLPAD RVGTSGRN+TP
Sbjct:   10 AEAGPAGLDAYTREHK--------------------------NQARQEVCDRLVSVIYEMRSVLMEVRENGGGGPLTTDLAARANMALSAVTAGTSAFGDMLRLEQPFDIPLKPAGVMNPLAKTARESGKRKPRASDDNNGPKRSGSKAGAAAASGXANASALQATGSGGTASLDTETSRKRKALKTTAKAAVKGSKLSSRASSVTSADNNSDDAVLASRDADGDTGTPSTLVSGGVQQKEQEQV--RSGRAEDPIALSSNDEDAESNGARGSAESGAMEENGTAPVPARACPSGVLVDHNSAQQQ--GLQGTGTAGVRTGTPDNPLGAQAPSKLALATHGGGXXXXXAFSSPPLPADRRVGTSGRNLTP 349          
BLAST of mRNA_E-siliculosus-1a_F_contig125.1552.1 vs. uniprot
Match: D7G8W3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W3_ECTSI)

HSP 1 Score: 369 bits (947), Expect = 2.340e-124
Identity = 218/256 (85.16%), Postives = 230/256 (89.84%), Query Frame = 0
Query:    1 MCDDANNHRDPRRGSRSSWRFAQVGPAGLDAYTREHKVCDGKKFPSTILPQHTEEPTKPSQRSNQTRQEVCDRLVSVIDEMRSVLVEVRENGGGGSLTTDLAARANVALSAVTSGTSAFGDMLRLERPFDIPPKPAGVMNPLAKTARESGKRKPLASDGNNRPKRSGSKAGAAAESGGANASVSKATGSGGTASLDTETSRKSKALKTTAKSAVKGNKFSSRASSXXXXXXXXXXAALASPDADGDTGTPSTLVSG 256
            MCDDA +HRDPR GSRSSW+ A+ GPAGLDAYTREHKVCD KKFP TILPQHTEEPTKPS   NQ RQE+CDRLVSVIDEMRSVL+EVRE GGGGSLTTDLAA ANVALS VT+GTSAFG+ML LERPFDIP KPAGVM+PLAKTARESGKRKP ASDGNN PKRSGSKAGAAAESGGANASVS AT SGGTASLDT+ SRKSKALKTTAK+ VKG++ SS AS XXXXXXXXXXA LASPDADGDT TPSTLVSG
Sbjct:    1 MCDDATDHRDPRSGSRSSWK-AEAGPAGLDAYTREHKVCDDKKFPPTILPQHTEEPTKPSP-ENQARQEICDRLVSVIDEMRSVLMEVREKGGGGSLTTDLAACANVALSPVTAGTSAFGNMLHLERPFDIPLKPAGVMSPLAKTARESGKRKPRASDGNNEPKRSGSKAGAAAESGGANASVSNATESGGTASLDTKRSRKSKALKTTAKAVVKGSRLSSCASXXXXXXXXXXXAVLASPDADGDTATPSTLVSG 254          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig125.1552.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKK3_9PHAE3.210e-15475.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G8W3_ECTSI2.340e-12485.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig125contigE-siliculosus-1a_F_contig125:4267..7026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig125.1552.1mRNA_E-siliculosus-1a_F_contig125.1552.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig125 4267..8142 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig125.1552.1 ID=prot_E-siliculosus-1a_F_contig125.1552.1|Name=mRNA_E-siliculosus-1a_F_contig125.1552.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=396bp
MCDDANNHRDPRRGSRSSWRFAQVGPAGLDAYTREHKVCDGKKFPSTILP
QHTEEPTKPSQRSNQTRQEVCDRLVSVIDEMRSVLVEVRENGGGGSLTTD
LAARANVALSAVTSGTSAFGDMLRLERPFDIPPKPAGVMNPLAKTARESG
KRKPLASDGNNRPKRSGSKAGAAAESGGANASVSKATGSGGTASLDTETS
RKSKALKTTAKSAVKGNKFSSRASSAASEDNNSDDAALASPDADGDTGTP
STLVSGGVQQKQQQQQQVRSGGAEDPIALSSSDEDAESNGARGSTESGAM
EENGTAPVPAQAYSSGVLVDHNSAQQQQQGSQGKGTAGVRTETSENHLGA
QAPSNPASATHGGGSGGGGAFSSPPLPADGRVGTSGRNITPLARP*
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