prot_E-siliculosus-1a_F_contig12490.1549.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12490.1549.1
Unique Nameprot_E-siliculosus-1a_F_contig12490.1549.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length43
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12490.1549.1 vs. uniprot
Match: Q6XLT6_9PHYC (FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XLT6_9PHYC)

HSP 1 Score: 80.5 bits (197), Expect = 1.420e-16
Identity = 36/43 (83.72%), Postives = 39/43 (90.70%), Query Frame = 0 
Query:    1 MIREMASRGVVLMVNEYNTSKKCPGCFGDTVEDKERRTRSCTN 43
            +IREMA+RGVVLMVNEYNTSK+CPGC  DTVEDKERR RSC N
Sbjct:  679 LIREMAARGVVLMVNEYNTSKQCPGCLEDTVEDKERRIRSCIN 721
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BLAST of mRNA_E-siliculosus-1a_F_contig12490.1549.1 vs. uniprot
Match: A0A6H5JA56_9PHAE (DDE_Tnp_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA56_9PHAE)

HSP 1 Score: 79.7 bits (195), Expect = 2.640e-16
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 MIREMASRGVVLMVNEYNTSKKCPGCFGDTVEDKERRTRSCTN 43
            +IREMASRGVVLMV EYNTSKKCPGC  DTVEDKERR RSC N
Sbjct:  709 LIREMASRGVVLMVEEYNTSKKCPGCGEDTVEDKERRIRSCKN 751
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BLAST of mRNA_E-siliculosus-1a_F_contig12490.1549.1 vs. uniprot
Match: UPI0000161E54 (EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E54)

HSP 1 Score: 79.7 bits (195), Expect = 2.640e-16
Identity = 37/43 (86.05%), Postives = 38/43 (88.37%), Query Frame = 0 
Query:    1 MIREMASRGVVLMVNEYNTSKKCPGCFGDTVEDKERRTRSCTN 43
            +IREMASRGVVLMVNEYNTSK CPGC  DTVEDKERR RSC N
Sbjct:  670 LIREMASRGVVLMVNEYNTSKMCPGCGEDTVEDKERRIRSCKN 712
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12490.1549.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Q6XLT6_9PHYC1.420e-1683.72FirrV-1-M1 n=1 Tax=Feldmannia irregularis virus a ... [more]
A0A6H5JA56_9PHAE2.640e-1686.05DDE_Tnp_1 domain-containing protein n=1 Tax=Ectoca... [more]
UPI0000161E542.640e-1686.05EsV-1-178/222 paralog 2 n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12490contigE-siliculosus-1a_F_contig12490:107..235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12490.1549.1mRNA_E-siliculosus-1a_F_contig12490.1549.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12490 107..265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12490.1549.1 ID=prot_E-siliculosus-1a_F_contig12490.1549.1|Name=mRNA_E-siliculosus-1a_F_contig12490.1549.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=43bp
MIREMASRGVVLMVNEYNTSKKCPGCFGDTVEDKERRTRSCTN
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