prot_E-siliculosus-1a_F_contig1249.1545.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1249.1545.1
Unique Name	prot_E-siliculosus-1a_F_contig1249.1545.1
Type	polypeptide
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length	392

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1249.1545.1 vs. uniprot
Match: D8LHL2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL2_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 3.120e-240
Identity = 358/382 (93.72%), Postives = 364/382 (95.29%), Query Frame = 0

Query:    1 MRRGPADKRLAQGHDTELEEDGVEDGVKTLWKRENEKEGVGLGGKPTVGGCEVGGSSSRPSPSSSSSSLDGTQGGRPCWPQSPWLSSARSRKKNSGKEAGAGAGNRFEVIAEESINAATRDQEVKRRATDEAHTVESGARHRLEMAKSTKNDIYERLQGCWQRCLEPTKLELHRLEKMLDDCSDVLPTAEESARRARDVARSAENIYALVRHSASHARQAHESAREEVLFPPLLCDDYGALLRAQHRTREALVKAIQSVKNARGQVEGARAAVKNAVEIIGVEPFRRAFLADKVAEAKRRHKEVNTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAIIAFQAAQRQTARTRATFSLLTCGRGGSKRGEAESFLAREGGE 382
            MRRG A KR  +GHDTELEEDGVE+GVKTLWKRENEKEGV LGGKPTVGGCEV GSSSRPSP SSSSSLDGTQGGRPCWPQSPWLSS  SRKK  G+EA AGAGNRFEVIAEESINAA RDQEVKRR  DEAHTVESGARHRLEMAKSTKNDIYERLQGCWQRCLEPTKLELHRLEKMLDDCSDVLPTAEESARRARDVARSAENIYALVRHSASHA+QAHESAREEVLFPPLLCDDYGALLRAQHRTREAL KAIQSVKNARGQVEGARAAVKNAVEI+GVEPFRRAFLADKVAEAKRRHKEVNTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAA+IAFQAAQRQTARTRATFSLLTCGRGGSKRGEAE FL REGGE
Sbjct:    1 MRRGLARKRWEEGHDTELEEDGVEEGVKTLWKRENEKEGVVLGGKPTVGGCEVDGSSSRPSPLSSSSSLDGTQGGRPCWPQSPWLSSVGSRKKKGGEEAAAGAGNRFEVIAEESINAAMRDQEVKRRVMDEAHTVESGARHRLEMAKSTKNDIYERLQGCWQRCLEPTKLELHRLEKMLDDCSDVLPTAEESARRARDVARSAENIYALVRHSASHAKQAHESAREEVLFPPLLCDDYGALLRAQHRTREALAKAIQSVKNARGQVEGARAAVKNAVEIVGVEPFRRAFLADKVAEAKRRHKEVNTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAMIAFQAAQRQTARTRATFSLLTCGRGGSKRGEAERFLVREGGE 382

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BLAST of mRNA_E-siliculosus-1a_F_contig1249.1545.1 vs. uniprot
Match: A0A6H5KIW7_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIW7_9PHAE)

HSP 1 Score: 449 bits (1154), Expect = 6.610e-156
Identity = 241/260 (92.69%), Postives = 252/260 (96.92%), Query Frame = 0

Query:  120 RDQEVKRRATDEAHTVESGARHRLEMAKSTKNDIYERLQGCWQRCLEPTKLELHRLEKMLDDCSDVLPTAEESARRARDVARSAENIYALVRHSASHARQAHESAREEVLFPPLLCDDYGALLRAQHRTREALVKAIQSVKNARGQVEGARAAVKNAVEIIGVEPFRRAFLADKVAEAKRRHKEVNTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAIIAFQAAQRQTARTRATFSLLTCGRGGSKRGEAESFLARE 379
            RDQEVKRR+ D+AHTVES ARHRLEMAK+TKNDI+ERLQGC QRCLEPTK+ELHRLEKMLDDCSDVLPTAEESARRARDVARSAE+IY LVRHSASHARQAHESAREEVLFPPLLCDDYGALLRAQHRTREALVK+I+SVKNARGQVEGARAAVKNAVE IGVEPF+RAFLADKV EAKRR+KEV+TNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAIIAFQAAQRQTART ATFSLLTCGRGGSKRGEAE FLARE
Sbjct:    2 RDQEVKRRSMDDAHTVESDARHRLEMAKNTKNDIHERLQGCRQRCLEPTKMELHRLEKMLDDCSDVLPTAEESARRARDVARSAESIYTLVRHSASHARQAHESAREEVLFPPLLCDDYGALLRAQHRTREALVKSIESVKNARGQVEGARAAVKNAVESIGVEPFKRAFLADKVVEAKRRYKEVSTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAIIAFQAAQRQTARTLATFSLLTCGRGGSKRGEAERFLARE 261

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1249.1545.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1249.1545.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LHL2_ECTSI	3.120e-240	93.72	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]
A0A6H5KIW7_9PHAE	6.610e-156	92.69	Uncharacterized protein (Fragment) n=1 Tax=Ectocar...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 294..321

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1249	contig	E-siliculosus-1a_F_contig1249:8190..10643 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1249.1545.1	mRNA_E-siliculosus-1a_F_contig1249.1545.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	mRNA	E-siliculosus-1a_F_contig1249 8190..10643 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1249.1545.1 ID=prot_E-siliculosus-1a_F_contig1249.1545.1|Name=mRNA_E-siliculosus-1a_F_contig1249.1545.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=392bp
MRRGPADKRLAQGHDTELEEDGVEDGVKTLWKRENEKEGVGLGGKPTVGG
CEVGGSSSRPSPSSSSSSLDGTQGGRPCWPQSPWLSSARSRKKNSGKEAG
AGAGNRFEVIAEESINAATRDQEVKRRATDEAHTVESGARHRLEMAKSTK
NDIYERLQGCWQRCLEPTKLELHRLEKMLDDCSDVLPTAEESARRARDVA
RSAENIYALVRHSASHARQAHESAREEVLFPPLLCDDYGALLRAQHRTRE
ALVKAIQSVKNARGQVEGARAAVKNAVEIIGVEPFRRAFLADKVAEAKRR
HKEVNTNYEALEVERKRAVNKEKKAAATYKEAAIRDGAAIIAFQAAQRQT
ARTRATFSLLTCGRGGSKRGEAESFLAREGGEEEGEEEDEEE