prot_E-siliculosus-1a_F_contig1243.1519.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1243.1519.1
Unique Nameprot_E-siliculosus-1a_F_contig1243.1519.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length588
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: D8LHE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHE0_ECTSI)

HSP 1 Score: 918 bits (2372), Expect = 0.000e+0
Identity = 468/587 (79.73%), Postives = 489/587 (83.30%), Query Frame = 0
Query:    1 MGKPSQDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSSRSGGTVGSPLGRDIFYWPDMPRTDADDNKVCYWIMGSSAWMNVAQPMILGVSSLPTISVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEIREQQNTLVGMGRASEAPYNPNDLLFNAPPSRGVRHVWRDPCQVCKAADRPEISXXXXXXXXXXXXXRPLRARTVGGDSSSVQHAPPSFPLADIDPRSALSLEARTPARAMRKEQPAWRLNTATGVENQRPKQSTGPGGIPGSPCPRRSTAPPALGRSRDTTTSSAGFNTARGLTTEFGTRTSLNTQTDNQFRHTSDTRMKEGQRNASWEDVVRSALFDXXXXXXXXXXXXXXTQPSFSSTTSDSRAPVFLPWYDGTSPYGDXXXXXXXXXXXXSGGPVDSGCGGYLSPPSTGTSPRNPSLDFGTADDCWSASSRQTSFSPFGAPGHPGAGTDASSYGYDPRNLSCHSDGGXXXXXXXISXXXXGVSHVSQTRRTTTYPFGSFAEGM 587
            MGKPS DLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLD+MEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHS+RSGG+VGSPLGRDIFYWPDMPRTDAD N+    IM  SAWM+VAQ MI+GVSSLPT+S NYDMDPSMLHSEDATERAVYQLWY+LVSTITEIREQQN LVGMG   EA Y+ N    NAPPSRGVRH+W D CQVC++ADRPEIS             R L ART GG SSSVQHAPPSFPLADIDPRSALSLEARTPARAMRKEQP+WRLNTATG ENQRPKQSTGPGG+PGSPCPRRSTAPPALGRSRDTTTSSAGFNTARGLT EFGTRTSLNTQ +NQ RH SDTRMK GQRNASWEDVVRSALF+              TQ SFSST S+SRAP FLPWYDGTSPY D            SGG V+S  G YLSPPSTGTSPRNPSLDFGTADDCWSASS+QTSFSP GAPGHPGA T ASSY YDPRNLSC S+G         +    GVSH SQTRRTTTYPFGSFAEGM
Sbjct:    1 MGKPSLDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDQMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKHNGNRSHSTRSGGSVGSPLGRDIFYWPDMPRTDADGNE----IMDPSAWMDVAQLMIVGVSSLPTVSANYDMDPSMLHSEDATERAVYQLWYTLVSTITEIREQQNPLVGMGSVPEASYDRNGSFCNAPPSRGVRHIWSDLCQVCESADRPEISPEIVQVTVPATVPRALGARTGGGGSSSVQHAPPSFPLADIDPRSALSLEARTPARAMRKEQPSWRLNTATGAENQRPKQSTGPGGVPGSPCPRRSTAPPALGRSRDTTTSSAGFNTARGLTAEFGTRTSLNTQGNNQLRHASDTRMKGGQRNASWEDVVRSALFEDDDDTKEAASKPP-TQRSFSSTISESRAPGFLPWYDGTSPYDDTEVQSSEPPSYPSGGGVESTRGDYLSPPSTGTSPRNPSLDFGTADDCWSASSQQTSFSPCGAPGHPGASTGASSYLYDPRNLSCQSNGAGCGGGISSAG---GVSHASQTRRTTTYPFGSFAEGM 579          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A6H5KEG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEG2_9PHAE)

HSP 1 Score: 343 bits (879), Expect = 4.470e-112
Identity = 181/233 (77.68%), Postives = 194/233 (83.26%), Query Frame = 0
Query:   80 SRCVFIHDPRIRGPTAAYLYKHNGNRSHSSRSGGTVGSPLGRDIFYWPDMPRTDADDNKVCYWIMGSSAWMNVAQPMILGVSSLPTISVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEIREQQNTLVGMGRASEAPYNPNDLLFNAPPSRGVRHVWRDPCQVCKAADRPEISXXXXXXXXXXXXXRPLRARTVGGDSSSVQHAPPSFPLADIDPRSALSLEARTPARAMR 312
            +RCVFIHDPRIRGPTAAYLY H+G RSHS+RSGG+VGSPLGRDIFYWPDMPRTDAD N+                        LPT+ VNYDMDPSMLHSEDATERAVYQLWYSLVSTITEI EQ +TLVGMGRASEAPY+P+DLLFNAPPSRG RH+WRDPCQVC++ADR EIS    XXXXXXXXXRPLRART GG S+SVQHAP SFPLADIDPRSALSLEARTPARAMR
Sbjct:   19 ARCVFIHDPRIRGPTAAYLYNHHGKRSHSARSGGSVGSPLGRDIFYWPDMPRTDADGNE------------------------LPTVLVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEISEQPHTLVGMGRASEAPYDPSDLLFNAPPSRGRRHIWRDPCQVCESADRLEISPEIVXXXXXXXXXRPLRARTGGGGSTSVQHAPSSFPLADIDPRSALSLEARTPARAMR 227          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A6H5KCL9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCL9_9PHAE)

HSP 1 Score: 238 bits (607), Expect = 9.850e-72
Identity = 134/197 (68.02%), Postives = 138/197 (70.05%), Query Frame = 0
Query:  391 QFRHTSDTRMKEGQRNASWEDVVRSALFDXXXXXXXXXXXXXXTQPSFSSTTSDSRAPVFLPWYDGTSPYGDXXXXXXXXXXXXSGGPVDSGCGGYLSPPSTGTSPRNPSLDFGTADDCWSASSRQTSFSPFGAPGHPGAGTDASSYGYDPRNLSCHSDGGXXXXXXXISXXXXGVSHVSQTRRTTTYPFGSFAEGM 587
            Q RH SDTRMKEGQRNASWED VRSALF+              TQPSFSST S+S AP FLPWYDGTSPYGD            SG  V+   G YLS P TGTSPRNPSLDFG ADD WSASS+QTSFSP GAPGHPGA T ASSY YDPRNLSC S GG       IS    GVSHVSQTRRTTTYPFGSFAEGM
Sbjct:   13 QLRHASDTRMKEGQRNASWEDTVRSALFEDDDGTIETSSKPP-TQPSFSSTISESHAPGFLPWYDGTSPYGDTEVQSSEPPLYSSGRGVEPARGDYLSAPFTGTSPRNPSLDFGAADDRWSASSQQTSFSPCGAPGHPGASTGASSYVYDPRNLSCQSQGGGGGRG--ISGTG-GVSHVSQTRRTTTYPFGSFAEGM 205          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: D7FIR3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIR3_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 3.350e-24
Identity = 74/215 (34.42%), Postives = 107/215 (49.77%), Query Frame = 0
Query:    2 GKPSQDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRG-----PTAAYLYKHNGNR---SHSSRSGGTV-GS----PLGRD-----IFYWPDMPRTDADDNKVCYWIMGSSAWMNVAQPMILGVSSLPTISVNYDMDPSMLHSEDATERAVYQLWYSLVSTI 198
            G PS  ++  NRKTE+CRN++ G C     +CAFAHG  +++ ++L ++E  GRI +ASK++   C TW+ TG C Y  RCVFIHD R++G     P  + L K   +R   S  SR GG+  GS    P G D     + ++PD PR D D  +                        LP   V YD+D  +  +        Y+LWYS ++ +
Sbjct:   27 GIPSSSIIEHNRKTELCRNYENGSCTFGD-RCAFAHGLDDIKHKTLRDLEKEGRIADASKYQACLCQTWVATGTCLYGRRCVFIHDDRVKGTIGLSPRTSTLAKSAASRISSSTGSRGGGSGRGSSPLCPAGEDNDNGSLLFFPDRPR-DPDSRE------------------------LPADEVRYDIDFGVDVNTGRDHSTAYKLWYSFITVM 215          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A836CEW5_9STRA (C3H1-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEW5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.840e-21
Identity = 43/73 (58.90%), Postives = 53/73 (72.60%), Query Frame = 0
Query:    8 LVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCL--TWITTGACPY 78
            ++  NRKTE+CRNWQ G C+    KCAFAHG  EL  Q+L EME  GRIPNA++FR  PC+  TW+ TG+CPY
Sbjct:    4 VIEANRKTELCRNWQNGTCLYGG-KCAFAHGQSELTVQTLTEMEKAGRIPNAARFRSNPCMASTWVATGSCPY 75          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: D7FXU2_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXU2_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 2.830e-17
Identity = 54/136 (39.71%), Postives = 72/136 (52.94%), Query Frame = 0
Query:   68 LTWITTGACPYFSRCVFIHDPRIRGPTAAYLY--KHNGNRSHSSRSGGTVGSPLGRDIFYWPDMPRTDADDNKVCYWIMGSSAWMNVAQPMILGVSSLPTISVNYDMDPSMLHSEDATERAVYQLWYSLVSTITEI 201
            +TW+ TG+CPY SRCVFIHDPR++G   A+LY   H  +  HSS S            F++PD+PR D D                         S LP  S  YD+DP+M  ++D  +RAVY +WYS VS +T+I
Sbjct:    1 MTWVATGSCPYSSRCVFIHDPRVQGRQEAWLYAGSHMSSAYHSSDS-----------AFFFPDLPR-DPD-------------------------SLLPRDSSLYDLDPAMCAAKDRADRAVYNMWYSFVSVLTDI 99          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A7S2PVK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PVK8_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.980e-16
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0
Query:   14 KTEICRNWQQGRCVAEAW--KCAFAHGTHELR--RQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGP 93
            KTE+CR ++ G      W  KC +AHG HEL+    +L  ME +G+I NA  +   PC+TWI+TGACPY  RC  IHDP I GP
Sbjct:   11 KTEMCRYYELGGLKNCPWGDKCNYAHGKHELKFNHTTLTLMERSGQIANAKTYLSRPCMTWISTGACPYGRRCPAIHDPSITGP 94          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A835Z3W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3W2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.510e-12
Identity = 67/219 (30.59%), Postives = 87/219 (39.73%), Query Frame = 0
Query:   41 ELRRQSLDEME---------YTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAY----------------------LYKHNGNRSHSSRSG--GT-----VGSPLGRDIFYWPDMPRTDADDNKVCYWIMGSSAWMNVAQPMILGVSSLPTISVNYDMDPSMLHSE---DATERAVYQLWYSLVSTITEIREQQNTLVGMGRASEAP 218
            ELR + L ++            GRIPNA+KFR YPCL           SRCVF+HDPR+R   A+                       L    G     SR G  GT     +G    RD FYWPD+ R    + +       SSA            + LP     Y++  +M   +   D T  AVY LWYSLV T+ + +         GR + AP
Sbjct:    9 ELRNRDLSQLADWLVRIRRAEAGRIPNATKFRSYPCL-----------SRCVFLHDPRLRSTPASRDVSGTTTPEALSTPASSRASTPLSTGKGGSRCESRGGVLGTGPSSGLGMRAARDFFYWPDVVREPIPEGEPSPSTSTSSAPRR---------AKLPACEATYELSSAMADPDKTGDVTGAAVYHLWYSLVETVLDEKGIPTETAANGRPAVAP 207          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A7S3Q9Y3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q9Y3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.630e-12
Identity = 36/81 (44.44%), Postives = 51/81 (62.96%), Query Frame = 0
Query:   10 SVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRI 90
            S   KTE+CRN+   R      KC +AHG  EL+   L ++E  G + +   FR +PCLTW+ TGACP+ +RC+ +HDPR+
Sbjct:  419 SAKVKTELCRNFNTRRGCQFGDKCNYAHGAQELKLTKLMDLERAGLV-DIEIFRTHPCLTWVATGACPFDTRCIGLHDPRV 498          
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Match: A0A7S3Q3T8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q3T8_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 4.190e-11
Identity = 35/93 (37.63%), Postives = 55/93 (59.14%), Query Frame = 0
Query:    9 VSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEMEYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYKH 101
             +   KTE+C+  QQGR  A   +C +AH  +EL+  ++ E     +I +   FR  PC  +++TGACP+ +RC  IHD  ++G  +AY+ KH
Sbjct:   24 TAAKEKTEMCKTVQQGRYCAFGDRCKYAHNRNELKLTTVRERMNNKQISDGRTFRSRPCFDFLSTGACPFGTRCPNIHDEDMKGGHSAYI-KH 115          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1243.1519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D8LHE0_ECTSI0.000e+079.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KEG2_9PHAE4.470e-11277.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KCL9_9PHAE9.850e-7268.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIR3_ECTSI3.350e-2434.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CEW5_9STRA7.840e-2158.90C3H1-type domain-containing protein n=1 Tax=Tribon... [more]
D7FXU2_ECTSI2.830e-1739.71C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2PVK8_9STRA7.980e-1650.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A835Z3W2_9STRA1.510e-1230.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3Q9Y3_9STRA1.630e-1244.44Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S3Q3T8_9STRA4.190e-1137.63Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 12..39
e-value: 1.3E-4
score: 31.3
coord: 61..88
e-value: 1.6
score: 14.6
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 66..89
score: 9.704
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 12..40
score: 11.047
NoneNo IPR availableGENE3D4.10.1000.10coord: 8..45
e-value: 5.3E-10
score: 40.6
NoneNo IPR availablePANTHERPTHR12547CCCH ZINC FINGER/TIS11-RELATEDcoord: 9..339
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 59..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1243contigE-siliculosus-1a_F_contig1243:17434..26322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1243.1519.1mRNA_E-siliculosus-1a_F_contig1243.1519.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1243 17434..26322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1243.1519.1 ID=prot_E-siliculosus-1a_F_contig1243.1519.1|Name=mRNA_E-siliculosus-1a_F_contig1243.1519.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=588bp
MGKPSQDLVSVNRKTEICRNWQQGRCVAEAWKCAFAHGTHELRRQSLDEM
EYTGRIPNASKFRCYPCLTWITTGACPYFSRCVFIHDPRIRGPTAAYLYK
HNGNRSHSSRSGGTVGSPLGRDIFYWPDMPRTDADDNKVCYWIMGSSAWM
NVAQPMILGVSSLPTISVNYDMDPSMLHSEDATERAVYQLWYSLVSTITE
IREQQNTLVGMGRASEAPYNPNDLLFNAPPSRGVRHVWRDPCQVCKAADR
PEISPEIVPVSVPATVPRPLRARTVGGDSSSVQHAPPSFPLADIDPRSAL
SLEARTPARAMRKEQPAWRLNTATGVENQRPKQSTGPGGIPGSPCPRRST
APPALGRSRDTTTSSAGFNTARGLTTEFGTRTSLNTQTDNQFRHTSDTRM
KEGQRNASWEDVVRSALFDDDDDDTEEAASEPPTQPSFSSTTSDSRAPVF
LPWYDGTSPYGDTEVPSSEPPSYPSGGPVDSGCGGYLSPPSTGTSPRNPS
LDFGTADDCWSASSRQTSFSPFGAPGHPGAGTDASSYGYDPRNLSCHSDG
GGGGGGGGISGAGGGVSHVSQTRRTTTYPFGSFAEGM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036855Znf_CCCH_sf
IPR000571Znf_CCCH