prot_E-siliculosus-1a_F_contig1240.1508.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1240.1508.1
Unique Nameprot_E-siliculosus-1a_F_contig1240.1508.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length393
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 2.770e-107
Identity = 161/164 (98.17%), Postives = 163/164 (99.39%), Query Frame = 0
Query:  229 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAGRQRHRRE 392
            MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTND+AATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTG KPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTL+MPDESAVSVDFPAWFAGRQRHRRE
Sbjct:    1 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLNMPDESAVSVDFPAWFAGRQRHRRE 164          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 9.230e-70
Identity = 116/250 (46.40%), Postives = 149/250 (59.60%), Query Frame = 0
Query:   43 IGLRRENGTFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAILEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEV 292
            +  R++   FS EWM++F S A+GC GSA D Y WR AGYGSNIN + +VWANA++ GR D +V+ +T  +F RT C+V S G ETRG W C FA VPHLCAFD+D+                                                  ML + LH+++QPWFKAD+Q ILDEPDIA MR+GKYVG+HIRRTDKANE +  KT+ Y  K   YL S    L A +ITG+W+S+D+ +VF+EV
Sbjct:   31 VDSRKDMAVFSNEWMEEFGSGALGCVGSAIDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVVRTDEWFPRTICNVTSYGEETRG-WPCFFAEVPHLCAFDADQ--------------------------------------------------MLVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDKANETKLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEV 229          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.920e-53
Identity = 120/380 (31.58%), Postives = 188/380 (49.47%), Query Frame = 0
Query:   23 GKAFGERGGVPPTLPFVAVDIGLRRENGTFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAI-LEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSAN----DMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKAN--EVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLY----VTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDE-SAVSVDFPAWFAGRQRHR 390
            G   GE      T P V            FS EW  +++    GC   A+  ++WR  G GSN+NNML  W  A+ +E  +D +V+    +   +  C+ ES G E + GW C+F  +PHLC F S ++       H VS      D+ +    D   +R        SL   G   +  +A +   L +++ PW +ADV  +         +   ++GLHIRR DK +  E      + YL  AV +L    + L+  +I GIWV+SD+  V  +VKQ+A ++ P ++   + +    V G   ++      D+ +Y   VY  A+L+ L  + +F GTFSSN+GR++ L+R+++ + D  SAVS+D P W AGR+R R
Sbjct:   84 GSEGGESAAAAATAPAVL-----------FSSEWAAEYARGEAGCD-LARGSFMWRGHGLGSNVNNMLNAWVYALSVEKWSDMTVVVDENQ-MKQVDCEEESGG-EAQAGWDCLFKPMPHLCTFPSAEE-------HMVSKGLPKADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRR 441          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 6.850e-53
Identity = 113/348 (32.47%), Postives = 179/348 (51.44%), Query Frame = 0
Query:   52 FSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAI-LEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKT---KAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLY----VTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDE-SAVSVDFPAWFAGRQRHR 390
            FS EW  +++    GC   A+  ++WR  G GSNINNML  W  A+ +E  +D +V+    +      C  ES G E + GW CIF  +PHLC F S + W ++     +   ++ +    D   +R        SL   G   +  +A +   L +++ PW +ADV  +         +   ++GLHIRR DK    +       K YL  AV +L    + L+  +I GIWV+SD+  V  +VKQ+A ++ P ++ + + +    V G   +       D+ +Y   VY  A+L+ L  + +F GTFSSN+GR++ L+R+++ + D  SAVS+D P W AGR+R R
Sbjct:  106 FSSEWAVEYARGEEGCD-LARGSFMWRGQGLGSNINNMLNAWVYALSVEKWSDMTVVVGENQ-MKWVDCGEESGG-EAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAELVEVARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRR 449          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.750e-26
Identity = 65/186 (34.95%), Postives = 107/186 (57.53%), Query Frame = 0
Query:  196 EVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANE--VQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLD-MPDESAVSVD 378
            +VMA    LL  ++ PW + DV+  L+ PD+   R   +VGLH+RR DK  E   Q V+TK YL+ A  +  +  +     +I  IWV+SDD  V +EV+ +A ++FP +    +++V+G      +        Y+  V + A+L+MLA  ++F GT++SNV R+VAL+R+ +     +S +S+D
Sbjct:  103 QVMA---RLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKASQ-DKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: R7QMX9_CHOCR (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX9_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 1.150e-9
Identity = 59/180 (32.78%), Postives = 96/180 (53.33%), Query Frame = 0
Query:  215 ADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---------RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 385
            A V+ +L+E  +    +G+YVG+H+RR DK+ EV  V    Y A AV  ++    ++A      ++V++DD A    ++QL       +A   V+ + GA+     RG  D         + +Y  +V L AE+E L G+ VF GTFSSN+GR+V ++R+     + ++VS+D   W  G
Sbjct:   24 AAVRVVLEEASVWG--AGEYVGVHVRRGDKSKEVADVPLWRYAA-AVRAVSG--EEMA------VFVAADDGASVRGLRQL-------LAGRKVVAIRGAEG----RGGHDQLATNRGYMKENYGRVVELLAEVEALRGAKVFVGTFSSNLGRLVHVLREG---DERNSVSLD-DRWAPG 177          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A1X6NXA9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXA9_PORUM)

HSP 1 Score: 67.0 bits (162), Expect = 2.220e-8
Identity = 54/169 (31.95%), Postives = 77/169 (45.56%), Query Frame = 0
Query:  233 KYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLA----------------SPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 385
            +YVG+H+RR DKA EV PV  +AY A+ V  LA                S      A  +T ++V+SDD                        +   A     +  AA   + +A+  L A++E+L G+A F G+ +SN+GR+V L+R     P  SAVSVD   W  G
Sbjct:  324 RYVGVHLRRGDKATEVPPVPVEAY-ARLVTLLAAADXXXXXXXXXXXXTSGXXXADAPPLTAVYVASDDXXXXXXXXXXXXXXXXXXXXXXXXHRQAA-----LNAAAWGATADAVAALWADVELLVGAAAFVGSGTSNLGRVVQLLRLARRAPPRSAVSVD-TRWGGG 485          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S0BFM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFM2_9RHOD)

HSP 1 Score: 62.4 bits (150), Expect = 1.480e-7
Identity = 52/160 (32.50%), Postives = 90/160 (56.25%), Query Frame = 0
Query:  229 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 385
            +R  ++VGLHIRR DKA EV  +  ++Y A+ V  ++ P        I+ I++++DD ++  E++ L  E+   I   A    TG     L R A +   R +  + + L AE+++L  +  F GT+SSN+GR++A++R   D    +++S+D  AW +G
Sbjct:   47 LRPDEFVGLHIRRGDKALEVPLIPLESY-AEIVR-MSDPA-------ISKIFLATDDGSIIWELRDLLPEY--AIYTFADPQSTG----HLQRNANEDPMRQTVLSTMSLVAEIDILRQAKYFIGTYSSNIGRLLAVLR---DKDIRTSISMDV-AWSSG 187          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S0FBN4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FBN4_9DINO)

HSP 1 Score: 61.2 bits (147), Expect = 6.050e-7
Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 0
Query:  217 VQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAK-PVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMR 364
            + AI        +++GKY+G+H+RR DKA+E  PV +  Y+ K    L        + N+  ++V+SDD+     +K    +   G    A+ +V   + P    +      + ++  +L  +LE+L  +  F GT SSN+GR V   R
Sbjct:  118 LSAIAAAEQSLGLQTGKYIGVHVRRGDKASEAAPVSSMGYVWKLRELLQG------SPNLDTVFVASDDDRSLVRLKGKLGKL--GDLGRAIKFVEQPRLPDYAYKARGAHYNSKSSRFLLVDLELLVRAHTFVGTASSNLGRFVFFRR 258          
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S3EDL2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EDL2_9RHOD)

HSP 1 Score: 60.5 bits (145), Expect = 2.260e-6
Identity = 50/156 (32.05%), Postives = 87/156 (55.77%), Query Frame = 0
Query:  233 KYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 385
            +++GLHIRR DKA EV  +  ++Y A+ V  +  P        IT I++++DD ++  E++ L  E+   I   A    TG     L R A +   R +  + + L AE++++  +  F GT+SSN+GR++A++R   D    +++S+D  AW +G
Sbjct:  238 QFIGLHIRRGDKALEVPLIPLESY-AEIVR-MCDPA-------ITKIFLATDDGSIIWELRDLLPEY--AIYTFADPQSTG----HLQRNANEDPMRRTVLSTMSLVAEIDIIRQAKYFIGTYSSNIGRLLAVLR---DKDIRTSISMDV-AWSSG 374          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
D8LU00_ECTSI2.770e-10798.17Similar to putative alpha-6-fucosyltransferase n=1... [more]
D8LU01_ECTSI9.230e-7046.40GT23 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JTL0_9PHAE2.920e-5331.58GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
D7G435_ECTSI6.850e-5332.47Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Ta... [more]
A0A6H5LR29_9PHAE2.750e-2634.95GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
R7QMX9_CHOCR1.150e-932.78Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Ta... [more]
A0A1X6NXA9_PORUM2.220e-831.95Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S0BFM2_9RHOD1.480e-732.50Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0FBN4_9DINO6.050e-728.19Hypothetical protein (Fragment) n=1 Tax=Pyrodinium... [more]
A0A7S3EDL2_9RHOD2.260e-632.05Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.11350coord: 76..391
e-value: 1.7E-22
score: 81.9
NoneNo IPR availablePANTHERPTHR13132ALPHA- 1,6 -FUCOSYLTRANSFERASEcoord: 79..390
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..27
score: 0.66
IPR027350Glycosyltransferase family 23 (GT23) domainPROSITEPS51659GT23coord: 210..378
score: 27.363

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1240contigE-siliculosus-1a_F_contig1240:19177..23366 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1240.1508.1mRNA_E-siliculosus-1a_F_contig1240.1508.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1240 19177..23366 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1240.1508.1 ID=prot_E-siliculosus-1a_F_contig1240.1508.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1508.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=393bp
MAIIKASLPTVLALVVGILDVLGKAFGERGGVPPTLPFVAVDIGLRRENG
TFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAILEG
RNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKD
WNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAM
LHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQP
VKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFF
PGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSG
TFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAGRQRHRRE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027350GT23_dom