mRNA_E-siliculosus-1a_F_contig1240.1508.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_E-siliculosus-1a_F_contig1240.1508.1
Unique Name	mRNA_E-siliculosus-1a_F_contig1240.1508.1
Type	mRNA
Organism	Ectocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)

Homology

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D8LU00_ECTSI (Similar to putative alpha-6-fucosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU00_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 2.770e-107
Identity = 161/164 (98.17%), Postives = 163/164 (99.39%), Query Frame = 1

Query:  685 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAGRQRHRRE 1176
            MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTND+AATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTG KPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTL+MPDESAVSVDFPAWFAGRQRHRRE
Sbjct:    1 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDMAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGGKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLNMPDESAVSVDFPAWFAGRQRHRRE 164

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D8LU01_ECTSI (GT23 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU01_ECTSI)

HSP 1 Score: 228 bits (582), Expect = 9.230e-70
Identity = 116/250 (46.40%), Postives = 149/250 (59.60%), Query Frame = 1

Query:  127 IGLRRENGTFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAILEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEV 876
            +  R++   FS EWM++F S A+GC GSA D Y WR AGYGSNIN + +VWANA++ GR D +V+ +T  +F RT C+V S G ETRG W C FA VPHLCAFD+D+                                                  ML + LH+++QPWFKAD+Q ILDEPDIA MR+GKYVG+HIRRTDKANE +  KT+ Y  K   YL S    L A +ITG+W+S+D+ +VF+EV
Sbjct:   31 VDSRKDMAVFSNEWMEEFGSGALGCVGSAIDAYEWRNAGYGSNINFLTIVWANAMMAGRQDLAVVVRTDEWFPRTICNVTSYGEETRG-WPCFFAEVPHLCAFDADQ--------------------------------------------------MLVDHLHSYLQPWFKADIQRILDEPDIAEMRNGKYVGMHIRRTDKANETKLTKTEVYFRKVAQYLRSSPGGLRAADITGLWLSTDEVSVFNEV 229

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A6H5JTL0_9PHAE (GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTL0_9PHAE)

HSP 1 Score: 192 bits (488), Expect = 2.920e-53
Identity = 120/380 (31.58%), Postives = 188/380 (49.47%), Query Frame = 1

Query:   67 GKAFGERGGVPPTLPFVAVDIGLRRENGTFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAI-LEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSAN----DMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKAN--EVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLY----VTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDE-SAVSVDFPAWFAGRQRHR 1170
            G   GE      T P V            FS EW  +++    GC   A+  ++WR  G GSN+NNML  W  A+ +E  +D +V+    +   +  C+ ES G E + GW C+F  +PHLC F S ++       H VS      D+ +    D   +R        SL   G   +  +A +   L +++ PW +ADV  +         +   ++GLHIRR DK +  E      + YL  AV +L    + L+  +I GIWV+SD+  V  +VKQ+A ++ P ++   + +    V G   ++      D+ +Y   VY  A+L+ L  + +F GTFSSN+GR++ L+R+++ + D  SAVS+D P W AGR+R R
Sbjct:   84 GSEGGESAAAAATAPAVL-----------FSSEWAAEYARGEAGCD-LARGSFMWRGHGLGSNVNNMLNAWVYALSVEKWSDMTVVVDENQ-MKQVDCEEESGG-EAQAGWDCLFKPMPHLCTFPSAEE-------HMVSKGLPKADLVEAARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVSQGEASMYLCEEYLETAVEFLEGNDSQLSVGDIKGIWVASDEPKVIAKVKQIAQDYLPNVSEGDIFWASGGVEGGPEIERTATRTDQETYADFVYTFADLQQLTAADLFVGTFSSNIGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRR 441

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: D7G435_ECTSI (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G435_ECTSI)

HSP 1 Score: 191 bits (486), Expect = 6.850e-53
Identity = 113/348 (32.47%), Postives = 179/348 (51.44%), Query Frame = 1

Query:  154 FSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAI-LEGRNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKDWNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKT---KAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLY----VTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDE-SAVSVDFPAWFAGRQRHR 1170
            FS EW  +++    GC   A+  ++WR  G GSNINNML  W  A+ +E  +D +V+    +      C  ES G E + GW CIF  +PHLC F S + W ++     +   ++ +    D   +R        SL   G   +  +A +   L +++ PW +ADV  +         +   ++GLHIRR DK    +       K YL  AV +L    + L+  +I GIWV+SD+  V  +VKQ+A ++ P ++ + + +    V G   +       D+ +Y   VY  A+L+ L  + +F GTFSSN+GR++ L+R+++ + D  SAVS+D P W AGR+R R
Sbjct:  106 FSSEWAVEYARGEEGCD-LARGSFMWRGQGLGSNINNMLNAWVYALSVEKWSDMTVVVGENQ-MKWVDCGEESGG-EAQTGWDCIFKPMPHLCTFPSAESWKEYMVSKDLPEAELVEVARLDQDAVRFHPEEIVASLEGSGVDHIAALAAMAKYLWSNVTPWLQADVDFVTRASPSDVFQESPFLGLHIRRGDKVTHGRRASMYLCKEYLEAAVEFLEGDDSQLSVGDIKGIWVASDEPKVIAKVKQIAPDYLPNVSEDDIFWASGGVEGGPEIGRTATRTDKETYADFVYTLADLQQLTAADLFVGTFSSNMGRLLVLLRESIGLKDRASAVSIDGP-WRAGRRRRR 449

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A6H5LR29_9PHAE (GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LR29_9PHAE)

HSP 1 Score: 116 bits (291), Expect = 2.750e-26
Identity = 65/186 (34.95%), Postives = 107/186 (57.53%), Query Frame = 1

Query:  586 EVMAMLHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANE--VQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLD-MPDESAVSVD 1134
            +VMA    LL  ++ PW + DV+  L+ PD+   R   +VGLH+RR DK  E   Q V+TK YL+ A  +  +  +     +I  IWV+SDD  V +EV+ +A ++FP +    +++V+G      +        Y+  V + A+L+MLA  ++F GT++SNV R+VAL+R+ +     +S +S+D
Sbjct:  103 QVMA---RLLWKNLTPWLQEDVRKALERPDLDVFRRKPFVGLHVRRGDKVGEGEAQKVETKEYLSAAARFFDNKASQ-DKQDIEAIWVASDDHKVVEEVRAIARQYFPNVLDEDIVWVSGGARGGAVTTHTKSQGYQGFVMVFADLKMLAAGSLFVGTYTSNVSRLVALLREGIHGHARDSCISLD 284

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: R7QMX9_CHOCR (Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMX9_CHOCR)

HSP 1 Score: 68.2 bits (165), Expect = 1.150e-9
Identity = 59/180 (32.78%), Postives = 96/180 (53.33%), Query Frame = 1

Query:  643 ADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---------RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 1155
            A V+ +L+E  +    +G+YVG+H+RR DK+ EV  V    Y A AV  ++    ++A      ++V++DD A    ++QL       +A   V+ + GA+     RG  D         + +Y  +V L AE+E L G+ VF GTFSSN+GR+V ++R+     + ++VS+D   W  G
Sbjct:   24 AAVRVVLEEASVWG--AGEYVGVHVRRGDKSKEVADVPLWRYAA-AVRAVSG--EEMA------VFVAADDGASVRGLRQL-------LAGRKVVAIRGAEG----RGGHDQLATNRGYMKENYGRVVELLAEVEALRGAKVFVGTFSSNLGRLVHVLREG---DERNSVSLD-DRWAPG 177

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A1X6NXA9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NXA9_PORUM)

HSP 1 Score: 67.0 bits (162), Expect = 2.220e-8
Identity = 54/169 (31.95%), Postives = 77/169 (45.56%), Query Frame = 1

Query:  697 KYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLA----------------SPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 1155
            +YVG+H+RR DKA EV PV  +AY A+ V  LA                S      A  +T ++V+SDD                        +   A     +  AA   + +A+  L A++E+L G+A F G+ +SN+GR+V L+R     P  SAVSVD   W  G
Sbjct:  324 RYVGVHLRRGDKATEVPPVPVEAY-ARLVTLLAAADXXXXXXXXXXXXTSGXXXADAPPLTAVYVASDDXXXXXXXXXXXXXXXXXXXXXXXXHRQAA-----LNAAAWGATADAVAALWADVELLVGAAAFVGSGTSNLGRVVQLLRLARRAPPRSAVSVD-TRWGGG 485

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S0BFM2_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BFM2_9RHOD)

HSP 1 Score: 62.4 bits (150), Expect = 1.480e-7
Identity = 52/160 (32.50%), Postives = 90/160 (56.25%), Query Frame = 1

Query:  685 MRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 1155
            +R  ++VGLHIRR DKA EV  +  ++Y A+ V  ++ P        I+ I++++DD ++  E++ L  E+   I   A    TG     L R A +   R +  + + L AE+++L  +  F GT+SSN+GR++A++R   D    +++S+D  AW +G
Sbjct:   47 LRPDEFVGLHIRRGDKALEVPLIPLESY-AEIVR-MSDPA-------ISKIFLATDDGSIIWELRDLLPEY--AIYTFADPQSTG----HLQRNANEDPMRQTVLSTMSLVAEIDILRQAKYFIGTYSSNIGRLLAVLR---DKDIRTSISMDV-AWSSG 187

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S0FBN4_9DINO (Hypothetical protein (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0FBN4_9DINO)

HSP 1 Score: 61.2 bits (147), Expect = 6.050e-7
Identity = 42/149 (28.19%), Postives = 72/149 (48.32%), Query Frame = 1

Query:  649 VQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAK-PVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMR 1092
            + AI        +++GKY+G+H+RR DKA+E  PV +  Y+ K    L        + N+  ++V+SDD+     +K    +   G    A+ +V   + P    +      + ++  +L  +LE+L  +  F GT SSN+GR V   R
Sbjct:  118 LSAIAAAEQSLGLQTGKYIGVHVRRGDKASEAAPVSSMGYVWKLRELLQG------SPNLDTVFVASDDDRSLVRLKGKLGKL--GDLGRAIKFVEQPRLPDYAYKARGAHYNSKSSRFLLVDLELLVRAHTFVGTASSNLGRFVFFRR 258

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BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Match: A0A7S3EDL2_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EDL2_9RHOD)

HSP 1 Score: 60.5 bits (145), Expect = 2.260e-6
Identity = 50/156 (32.05%), Postives = 87/156 (55.77%), Query Frame = 1

Query:  697 KYVGLHIRRTDKANEVQPVKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFFPGIAPNAVLYVTGAKPVQLMRGAAD---RNSYEAMVYLRAELEMLAGSAVFSGTFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAG 1155
            +++GLHIRR DKA EV  +  ++Y A+ V  +  P        IT I++++DD ++  E++ L  E+   I   A    TG     L R A +   R +  + + L AE++++  +  F GT+SSN+GR++A++R   D    +++S+D  AW +G
Sbjct:  238 QFIGLHIRRGDKALEVPLIPLESY-AEIVR-MCDPA-------ITKIFLATDDGSIIWELRDLLPEY--AIYTFADPQSTG----HLQRNANEDPMRRTVLSTMSLVAEIDIIRQAKYFIGTYSSNIGRLLAVLR---DKDIRTSISMDV-AWSSG 374

The following BLAST results are available for this feature:

BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot

BLAST of mRNA_E-siliculosus-1a_F_contig1240.1508.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D8LU00_ECTSI	2.770e-107	98.17	Similar to putative alpha-6-fucosyltransferase n=1...	[more]
D8LU01_ECTSI	9.230e-70	46.40	GT23 domain-containing protein n=1 Tax=Ectocarpus ...	[more]
A0A6H5JTL0_9PHAE	2.920e-53	31.58	GT23 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T...	[more]
D7G435_ECTSI	6.850e-53	32.47	Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Ta...	[more]
A0A6H5LR29_9PHAE	2.750e-26	34.95	GT23 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A...	[more]
R7QMX9_CHOCR	1.150e-9	32.78	Alpha-(1,6)-fucosyltransferase, family GT23 n=1 Ta...	[more]
A0A1X6NXA9_PORUM	2.220e-8	31.95	Uncharacterized protein n=1 Tax=Porphyra umbilical...	[more]
A0A7S0BFM2_9RHOD	1.480e-7	32.50	Hypothetical protein n=1 Tax=Rhodosorus marinus Ta...	[more]
A0A7S0FBN4_9DINO	6.050e-7	28.19	Hypothetical protein (Fragment) n=1 Tax=Pyrodinium...	[more]
A0A7S3EDL2_9RHOD	2.260e-6	32.05	Hypothetical protein n=2 Tax=Rhodosorus marinus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E-siliculosus-1a_F_contig1240	contig	E-siliculosus-1a_F_contig1240:19177..23366 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90	2022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female	2021-02-24

Properties


Property Name	Value
Start	1
Stop	1
Cds size	1179
Model size	1179
Exons	8
Ec32 ortholog	Ec-12_003680.1
Ec32 ortholog description	similar to putative alpha-6-fucosyltransferase
Hectar predicted targeting category	signal peptide
BRITE	ko00000,ko00001,ko00002,ko01000,ko01003
Best eggNOG OG	NA\|NA\|NA
Best tax level	Eukaryota
CAZy	GT23
COG Functional cat.	M
EC	2.4.1.68
EggNOG OGs	KOG3705@1,KOG3705@2759
EggNOG free text desc.	glycoprotein 6-alpha-L-fucosyltransferase activity
KEGG Module	M00075
KEGG Pathway	ko00510,ko00513,ko00533,ko01100,ko05202,map00510,map00513,map00533,map01100,map05202
KEGG Reaction	R05988,R09319
KEGG ko	ko:K00717
Seed eggNOG ortholog	2880.D7G435
Seed ortholog evalue	4.6e-46
Seed ortholog score	192.2
Taxonomic scope	Eukaryota

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_E-siliculosus-1a_F_contig1240.1508.1	prot_E-siliculosus-1a_F_contig1240.1508.1	Ectocarpus siliculosus Ec863f_EcPH12_90f female	polypeptide	E-siliculosus-1a_F_contig1240 19177..23366 -

The following CDS feature(s) are a part of this mRNA:

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at E-siliculosus-1a_F_contig1240:19177..23366-
coding sequence from alignment at E-siliculosus-1a_F_contig1240:19177..23366-

protein sequence of mRNA_E-siliculosus-1a_F_contig1240.1508.1

>prot_E-siliculosus-1a_F_contig1240.1508.1 ID=prot_E-siliculosus-1a_F_contig1240.1508.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1508.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=393bp
MAIIKASLPTVLALVVGILDVLGKAFGERGGVPPTLPFVAVDIGLRRENG
TFSEEWMDKFSSDAVGCAGSAKDPYLWRPAGYGSNINNMLLVWANAILEG
RNDASVITQTGRYFSRTTCDVESNGVETRGGWHCIFAAVPHLCAFDSDKD
WNKFNNRHHVSANDMKKGGLKDITVIRKRRTSTEQSLAALGYSMLEVMAM
LHNLLHTHIQPWFKADVQAILDEPDIAAMRSGKYVGLHIRRTDKANEVQP
VKTKAYLAKAVNYLASPTNDLAATNITGIWVSSDDEAVFDEVKQLASEFF
PGIAPNAVLYVTGAKPVQLMRGAADRNSYEAMVYLRAELEMLAGSAVFSG
TFSSNVGRMVALMRKTLDMPDESAVSVDFPAWFAGRQRHRRE*

mRNA from alignment at E-siliculosus-1a_F_contig1240:19177..23366-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_E-siliculosus-1a_F_contig1240.1508.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1508.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1508.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=4190bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:19177..23366- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAATAATAAAAGCATCGCTCCCAACCGTGCTAGCGCTCGTGGTGGG
GATTCTGGACGTCTTGGGAAAGGCCTTCGGAGAGCGAGGTAAGATTGCGG
AAGGTGCGCTGTCAAAAGAGGTCCTTGTCACTGCCAGTAGTTGATCTGCG
AGGCACCTGATACATAATGTAGAGGTCAACATCCTACGTTACAATGACGA
AGTTTCGATCGCGACATAGGTCTTCGATGTTTATGCAAATTATGGTCTAT
CACGCTCCTCCTTTCTCCAAAAGTGTCCTGCGTGTTACATTTGTTGTTGA
GGGTGGTAGATTCGCCTTGCGATCCGACACAAGCACTGACACCCCCAAGT
ATGCTCTCGTGCTGCCTTGTTGTTTGGAAACTGACAACGGATACAAGGGG
GTGTACCCCCGACCTTACCATTCGTTGCGGTAGACATTGGTCTGCGCCGA
GAAAATGGGACGTTCTCCGAAGAATGGATGGACAAGTTTAGCAGTGACGC
GGTTGGCTGCGCTGGTTCGGCGAAAGACCCATACCTGTGGAGACCTGCCG
GTTACGGCAGCAATATTAACAGTAAGTCGCACAAACAAATGTAGTTCAAG
CCGGTTTAGATTATTCGACGGATATACATCGTACAAATTGTCTCGTACAC
CAGACGACAAAGCACACCCTAACTTGTGTCACCCGTGAAGTGTGTGTCAG
GAAGGATTGTCTGAGGCACAGGTGGTGCTTGGATTGAGCGAGTTGTGAGG
AATTTCCCTAGAGGTATTCAAGACACGTTCCGCTCATTTCATACGTTGGC
CCAGAAACAACGTTGTGGAATGCAGGTTGTTGTTCGATTCTTGCAAACCG
CTCCCCCATCCCTCGTACAGCTGCAGCCGGCGACGGCACCGTACCCCTTC
TCTATCCAACTCGCAACAACTCGGAATTCATCGCCTCGTCATAGAAAGGC
ACAACACAGCACATTGGGTTTTTATATCGCGCTCGTGCCCGCCACCCACA
AACAAACCCAAAATGATGGGTTTTGAGGACAGATGCACTCGGTGCCCAAG
TAGCAAGCTGATCTTGCCAGGAAAAATATTTCAACACTTGTTCTGGCCCT
TCCTCACAACGTGCTTTGGCAGATATGCTTCTCGTCTGGGCTAATGCAAT
TTTGGAGGGGCGCAATGATGCCTCTGTCATCACCCAGACGGGCAGATATT
TCTCTCGAACGACGTGCGACGTTGAAAGCAACGGAGTAGAAACACGGGGA
GGCTGGCATTGCATCTTTGCTGCGGTACCCCACCTGTGCGCCTTTGACAG
TGACAAGGTCCGCCTCCGTTGGCACTCCTTGTCTTGGGGTTATGTATTTC
CAACACCCTACGCATGGCACGGGCTCCCTGTTCTCAAAGTACGCATGCCC
GCCGTTCGATGCTGTGAAGGAAGCGTTGACAGCGACGCACGAACGTCGAG
AAATGTCGAGATTTTGTGCTGCAAGTGCGTCGGAGTAGTTGCGATTGGTC
TTCCTGCAGCAAGCAGGCGTCGTTGGATACTTCTGAACAACGGTAGTCCC
GTTCTGGCGTACCACGAGTGAGCCCCCTGCTCTTCCAATACCTAACTAAA
CGCGCCTAGCACTGCGGTGTGCTCGACCACTATTGTCCTCGCCGGTTGAA
TTCTGCAGGACTGGAACAAGTTCAACAATCGGCATCATGTATCCGCAAAC
GACATGAAAAAAGGTGGCTTAAAGGACATAACCGTCATTCGTAAAAGACG
TACCTCGACCGAACAGTCCCTTGCAGCGCTGGGCTACAGCATGCTGGAGG
TTATGGCTGTGAGTTAGTAATGGTGGAATATTTTGTGGAATCATAGGAAA
TCCTTCCGGGAGGATTGCTTCTGGTATGCCGCAGATAGGTAGGCGATGAA
CGTGAATGGGTTAATCCTGCCGTTGCGTATCTGTGCAATGGTTGTCCGTC
GTAGAAGCGTGCAACTCCTTTTCAGGCGTTTGTCCTCTGGCTCCGTCAAG
ACTGCGATTGTGATAATCACATGACGCTGCTCAATGTTTCATTGCATTGG
GCAGATGCTACATAATTTGTTACACACACATATTCAGCCGTGGTTCAAGG
CCGATGTTCAAGCTATTCTTGACGAACCCGACATCGCCGCGATGAGGAGC
GGAAAGTACGTCGGCCTACACATCCGCCGAACCGACAAGGCGAACGAAGT
ACAGCCCGTCAAGACCAAGGTGCAGTGTTTCAAGATGAATTGGGGGCTCA
TGCTGAAGCGTTGCTCCATTAGTTTACCGGGTACGTTCTGGCTGGAAGAA
CGTCATCGCCCCATAGGCCGGTAGCCCGCACTCTAATTACTGGCCAAATC
AGTACCGGAGCTTCTGTTTCACCCGACAGGCATACTTGGCGAAGGCTGTC
AACTATCTTGCCTCGCCGACGAACGACCTGGCAGCTACAAATATCACAGG
AATATGGGTGTCTTCAGATGACGAAGCTGTGTTCGACGAGGTGCGCGTCT
TATTATTCAAACGTTGTCGTTGAAGCACCAGTAGGCCATTGCGACGCCGT
GTCGCCACCGGGAGTGCTACCGCTCGAAACTTGACGGACTCCACGAAGTT
GTCCATCCCTGCAGATCGTTAGTGTTGAGAAAGTTGACACCGCCGTGCGT
CGTGCAAGGCTTGCCGCCTACCGATATTTCTGTATAGTTCTTACAAACTA
CTTTGAGCCACGTGCACATACGACGGTTATTGTCGGTCATGACGGGGGTG
AACGCTACCCTGCTTAAGGCGCCACACCAAGATACTATCCTGCATTACCT
TGGCCAGGCGAAGTTTCAACGTGCAATTTCTTAGATTGACCGTGTTTCTT
GAATACATTTATTCGTCACAAAGTACCACTCTCCGTACGCTGCGCAACGA
GATCGTCCAAAGCGAACTGCTCTGATCCTCGCGGTCACGCCATTCTGATA
GTCCCGCTTCGGCTAAAACCGGCACATAGCTTGAACTGCGTACACCACCC
CACATTATCTGTATTTATCCAAGCCCACCCCAGTCCTTGCACAACCCAGT
CCTCAACTGTTTCAACGACGCATTCAACTACCGGCGGATAGCGTCGGGGT
TCAATATAGGGTGGTCGTTCTCTTGCTTCCCGCGAAGTGCTTGAGTTCTT
GGGGAGAACGTGAGTAATGGTTCATGGACTTGTCCACACGCGCCCACCAG
CACTTCATTGAGACGGTGGAGATATTTTTGTCCAGTACCTTGGTCGCTGT
GGGTGGCGGTGTATTTGTCTGCGGTCGTTCGTGGGCGTTCGTGGGCGGCC
ATCGACACCTGTTTAAATACTTCCGCGGACGCCCGGCAGGGTTCACGGAC
CAACACGAAAAAATATTTCCTTGGATCGTGGTTACGGTGCCAAGTCCTCA
GATGATTGATCGGCCAGATTAGACGATTCATCCGGCCAGGAGGCGTCAAC
TCGTTACGTAAGAGAATTGGGGGTGATTGGCGGTGATTCCTCACGATGAA
TCGATCTCGAGCGCCACTATTGACAACTAACTGCAGACAGACATATACCT
GCTCAAAACCTACAAGGATCCCTGTAGGATCTTGGTGTCCAAGGCTCTTG
GGTACGGTCTCCACGTTTGTGATCAACAATCACTTGCTGCTGCTCGAGTG
CAATCGATTTGCAAGACGAAATCCCGTCTAGACCCCTCTCTGCACAACCC
CGTGACAATATCATGTGCGAGAATCAGGTTAAGCAGCTGGCATCGGAGTT
CTTCCCGGGCATTGCCCCGAACGCGGTGTTGTATGTCACAGGGGCGAAGC
CTGTGCAGCTCATGCGGGGTGCGGCTGATCGCAATGTAAGAGGGAGGGTT
GTGTACAACGGCGTCTTTCAGCTCCGTTGATCATCAAGCCAGTTTTTGCG
ACCCCCTGAGGCAACGCTATGATCTTCACTCAGTGTGCATCTCCAGTAGT
TGTCGCTTACCCAAAACGTGCTCCTGACGTAACTTCCCGCAGTCGTACGA
GGCCATGGTATATCTCAGGGCGGAGCTGGAAATGTTGGCTGGATCCGCCG
TATTCTCGGGCACATTCTCATCCAATGTTGGCCGAATGGTGGCTCTGATG
CGAAAAACACTCGACATGCCCGACGAGTCTGCTGTGAGCGTAGATTTTCC
AGCTTGGTTTGCAGGGCGGCAGCGTCATCGCCGCGAATAG

Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig1240:19177..23366-

>mRNA_E-siliculosus-1a_F_contig1240.1508.1 ID=mRNA_E-siliculosus-1a_F_contig1240.1508.1|Name=mRNA_E-siliculosus-1a_F_contig1240.1508.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=2358bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig1240:19177..23366- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
ATGGCAATAATAAAAGCATCGCTCCCAACCGTGCTAGCGCTCGTGGTGGG
GATTCTGGACGTCTTGGGAAAGGCCTTCGGAGAGCGAGATGGCAATAATA
AAAGCATCGCTCCCAACCGTGCTAGCGCTCGTGGTGGGGATTCTGGACGT
CTTGGGAAAGGCCTTCGGAGAGCGAGGGGGTGTACCCCCGACCTTACCAT
TCGTTGCGGTAGACATTGGTCTGCGCCGAGAAAATGGGACGTTCTCCGAA
GAATGGATGGACAAGTTTAGCAGTGACGCGGTTGGCTGCGCTGGTTCGGC
GAAAGACCCATACCTGTGGAGACCTGCCGGTTACGGCAGCAATATTAACA
GGGGTGTACCCCCGACCTTACCATTCGTTGCGGTAGACATTGGTCTGCGC
CGAGAAAATGGGACGTTCTCCGAAGAATGGATGGACAAGTTTAGCAGTGA
CGCGGTTGGCTGCGCTGGTTCGGCGAAAGACCCATACCTGTGGAGACCTG
CCGGTTACGGCAGCAATATTAACAATATGCTTCTCGTCTGGGCTAATGCA
ATTTTGGAGGGGCGCAATGATGCCTCTGTCATCACCCAGACGGGCAGATA
TTTCTCTCGAACGACGTGCGACGTTGAAAGCAACGGAGTAGAAACACGGG
GAGGCTGGCATTGCATCTTTGCTGCGGTACCCCACCTGTGCGCCTTTGAC
AGTGACAAGATATGCTTCTCGTCTGGGCTAATGCAATTTTGGAGGGGCGC
AATGATGCCTCTGTCATCACCCAGACGGGCAGATATTTCTCTCGAACGAC
GTGCGACGTTGAAAGCAACGGAGTAGAAACACGGGGAGGCTGGCATTGCA
TCTTTGCTGCGGTACCCCACCTGTGCGCCTTTGACAGTGACAAGGACTGG
AACAAGTTCAACAATCGGCATCATGTATCCGCAAACGACATGAAAAAAGG
TGGCTTAAAGGACATAACCGTCATTCGTAAAAGACGTACCTCGACCGAAC
AGTCCCTTGCAGCGCTGGGCTACAGCATGCTGGAGGTTATGGCTGACTGG
AACAAGTTCAACAATCGGCATCATGTATCCGCAAACGACATGAAAAAAGG
TGGCTTAAAGGACATAACCGTCATTCGTAAAAGACGTACCTCGACCGAAC
AGTCCCTTGCAGCGCTGGGCTACAGCATGCTGGAGGTTATGGCTATGCTA
CATAATTTGTTACACACACATATTCAGCCGTGGTTCAAGGCCGATGTTCA
AGCTATTCTTGACGAACCCGACATCGCCGCGATGAGGAGCGGAAAGTACG
TCGGCCTACACATCCGCCGAACCGACAAGGCGAACGAAGTACAGCCCGTC
AAGACCAAGATGCTACATAATTTGTTACACACACATATTCAGCCGTGGTT
CAAGGCCGATGTTCAAGCTATTCTTGACGAACCCGACATCGCCGCGATGA
GGAGCGGAAAGTACGTCGGCCTACACATCCGCCGAACCGACAAGGCGAAC
GAAGTACAGCCCGTCAAGACCAAGGCATACTTGGCGAAGGCTGTCAACTA
TCTTGCCTCGCCGACGAACGACCTGGCAGCTACAAATATCACAGGAATAT
GGGTGTCTTCAGATGACGAAGCTGTGTTCGACGAGGCATACTTGGCGAAG
GCTGTCAACTATCTTGCCTCGCCGACGAACGACCTGGCAGCTACAAATAT
CACAGGAATATGGGTGTCTTCAGATGACGAAGCTGTGTTCGACGAGGTTA
AGCAGCTGGCATCGGAGTTCTTCCCGGGCATTGCCCCGAACGCGGTGTTG
TATGTCACAGGGGCGAAGCCTGTGCAGCTCATGCGGGGTGCGGCTGATCG
CAATGTTAAGCAGCTGGCATCGGAGTTCTTCCCGGGCATTGCCCCGAACG
CGGTGTTGTATGTCACAGGGGCGAAGCCTGTGCAGCTCATGCGGGGTGCG
GCTGATCGCAATTCGTACGAGGCCATGGTATATCTCAGGGCGGAGCTGGA
AATGTTGGCTGGATCCGCCGTATTCTCGGGCACATTCTCATCCAATGTTG
GCCGAATGGTGGCTCTGATGCGAAAAACACTCGACATGCCCGACGAGTCT
GCTGTGAGCGTAGATTTTCCAGCTTGGTTTGCAGGGCGGCAGCGTCATCG
CCGCGAATAGTCGTACGAGGCCATGGTATATCTCAGGGCGGAGCTGGAAA
TGTTGGCTGGATCCGCCGTATTCTCGGGCACATTCTCATCCAATGTTGGC
CGAATGGTGGCTCTGATGCGAAAAACACTCGACATGCCCGACGAGTCTGC
TGTGAGCGTAGATTTTCCAGCTTGGTTTGCAGGGCGGCAGCGTCATCGCC
GCGAATAG