prot_E-siliculosus-1a_F_contig124.1503.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig124.1503.1
Unique Nameprot_E-siliculosus-1a_F_contig124.1503.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length206
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig124.1503.1 vs. uniprot
Match: D7FZV3_ECTSI (Flagellar associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZV3_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 1.290e-89
Identity = 168/206 (81.55%), Postives = 170/206 (82.52%), Query Frame = 0 
Query:    1 MSKKAGKKAKVKVPEIDPDSPEWIEEVARKQSQAYDMVQRAMTRSQIEVVLATRDNLVIQRAELETKAKQQSQDQSDIYQYLRKKLKDNYVAIAELETQVSHAHEDRLVREKQLLATIKDLNEERESEKIRLEEKLATLDVELTAIKEYQENSQIYEQTLKDMEAKIAGCKDAFNEEMALLNSQLEEEWETGRRDKEERRKITKKA 206
            MSKKAGKKAKVKVPEIDP+SPEWIEEVARKQS+AY MVQRAMTRSQIEVVL TRDNLVIQRAELETKAKQQSQDQSDIYQYLR KLKDNYVAIAELE Q                              IRL EKL TLDVELTAIKEYQENSQIYEQTLKDMEAKIAGCKDAFNEEMALLNSQLEEEWETGRRDKEERRKITKKA
Sbjct:    1 MSKKAGKKAKVKVPEIDPNSPEWIEEVARKQSEAYGMVQRAMTRSQIEVVLTTRDNLVIQRAELETKAKQQSQDQSDIYQYLRNKLKDNYVAIAELEAQ------------------------------IRLGEKLGTLDVELTAIKEYQENSQIYEQTLKDMEAKIAGCKDAFNEEMALLNSQLEEEWETGRRDKEERRKITKKA 176
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig124.1503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZV3_ECTSI1.290e-8981.55Flagellar associated protein n=1 Tax=Ectocarpus si... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 54..74
NoneNo IPR availableCOILSCoilCoilcoord: 111..142
NoneNo IPR availableCOILSCoilCoilcoord: 146..166

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig124contigE-siliculosus-1a_F_contig124:61945..65539 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig124.1503.1mRNA_E-siliculosus-1a_F_contig124.1503.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig124 61945..65539 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig124.1503.1 ID=prot_E-siliculosus-1a_F_contig124.1503.1|Name=mRNA_E-siliculosus-1a_F_contig124.1503.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=206bp
MSKKAGKKAKVKVPEIDPDSPEWIEEVARKQSQAYDMVQRAMTRSQIEVV
LATRDNLVIQRAELETKAKQQSQDQSDIYQYLRKKLKDNYVAIAELETQV
SHAHEDRLVREKQLLATIKDLNEERESEKIRLEEKLATLDVELTAIKEYQ
ENSQIYEQTLKDMEAKIAGCKDAFNEEMALLNSQLEEEWETGRRDKEERR
KITKKA
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