prot_E-siliculosus-1a_F_contig124.1497.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig124.1497.1
Unique Nameprot_E-siliculosus-1a_F_contig124.1497.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length506
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig124.1497.1 vs. uniprot
Match: D7FZW0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZW0_ECTSI)

HSP 1 Score: 645 bits (1665), Expect = 1.060e-227
Identity = 440/496 (88.71%), Postives = 450/496 (90.73%), Query Frame = 0
Query:   14 GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPLQPEGRAGGRDGSTARGGVFGPGRGIGRGGMGMTKGGGFAGGGYADRNSRRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEPAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRTAEVTAFDASSGLVRLLPASIEDDNKDGXXXXXXGLVNGCTKGHTAGQQQQGSSSGIAESNPEEGRVPTSNGHNRGGVSGDSKGTEDPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASPEPITDVGSKARSTSSGEVGGAEEDRALREGEEELEYSSLANVRVVRGPSTGELEKRKQALQKWNSLGPGGGILGGSAAGXXXXXXXXXXXXXXXXXXXXXASLPSATPKKAGRGGRXXXXXXXXXXXXGSSRKQGXXXXXASPKSVGKKQGAARGTLAVAGLLGK----LPAGGGGGAAGEATAPSSAV 505
            GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAA APL+PEGRAGGR  STARGGVFGPGRGIGRGGMGMT+GGG AGGGYA++N+RRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGE AAEAAAAGSVEN DARYV YEELPTDMRPQV DVLAFKTLSLNEETWTPELSPYRTAEVTAFD SSGLVRLLPASIEDDNKDGXXXXXX LVNGCTKGHTAGQQQQGSSSGI ESN EEGRVPTSNGHN+GGVSG+SKG EDPAAV XXXXXXXXXXXXXXXXXXXXXXXXXXXX            +KARSTSSG+VGGAEEDR LREGEEELEYSSLANVRVVRGPS GELEKRKQAL KWNSLGPGGGILGG    XXXXXXXXXXXXXXXXXXXX ASLPSATPKKAGRGGRXXXXXXXXXX  GS+RKQG     ASPKSVGKKQGAARGTLAVAGLLGK    LP GGGGGAAGEATAPSSAV
Sbjct:   33 GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAAIAPLEPEGRAGGRGDSTARGGVFGPGRGIGRGGMGMTRGGGAAGGGYANKNTRRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENGDARYVVYEELPTDMRPQVCDVLAFKTLSLNEETWTPELSPYRTAEVTAFDTSSGLVRLLPASIEDDNKDGXXXXXXXLVNGCTKGHTAGQQQQGSSSGITESNTEEGRVPTSNGHNQGGVSGNSKGMEDPAAVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNKARSTSSGKVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELEKRKQALHKWNSLGPGGGILGGXXXXXXXXXXXXXXXXXXXXXXXXPASLPSATPKKAGRGGRXXXXXXXXXXACGSARKQGGKGKGASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGGGAAGEATAPSSAV 528          
BLAST of mRNA_E-siliculosus-1a_F_contig124.1497.1 vs. uniprot
Match: A0A6H5L4H0_9PHAE (Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4H0_9PHAE)

HSP 1 Score: 591 bits (1523), Expect = 9.830e-200
Identity = 418/496 (84.27%), Postives = 425/496 (85.69%), Query Frame = 0
Query:   14 GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPLQPEGRAGGRDGSTARGGVFGPGRGIGRGGMGMTKGGGFAGGGYADRNSRRHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEPAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRTAEVTAFDASSGLVRLLPASIEDDNKDGXXXXXXGLVNGCTKGHTAGQQQQGSSSGIAESNPEEGRVPTSNGHNRGGVSGDSKGTEDPAAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEASPEPITDVGSKARSTSSGEVGGAEEDRALREGEEELEYSSLANVRVVRGPSTGELEKRKQALQKWNSLGPGGGILGGSAAGXXXXXXXXXXXXXXXXXXXXXASLPSATPKKAGRGGRXXXXXXXXXXXXGSSRKQGXXXXXASPKSVGKKQGAARGTLAVAGLLGK----LPAGGGGGAAGEATAPSSAV 505
            GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPL+PEGRAG        GGVFGPG      GMGMT+GGGFAGG YADRN+RRHSTG TANGDGGSAKKRGRGGWKKDYEVIASVESKAGE AAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYR AEV AFDASSGLVRL PAS EDDNKDG        VN CTKGHT GQQQQGSSS IAESN EEG VPTSNGHN GG  GDSKG E PAAV  XXXXXXXXXXXXXXXXXXXXXXXXXXXA  S EP TD  +KARSTSSGEVGGAEEDR LREGEEELEYSSLANVRVVRGPS GEL+KRKQALQKWNSLGPGGGILGGS   XXXXXXXXXXXXXXXXXXXXX        KKAGRGG+XXXXXXXXXXXXGS+RKQG   XXASPKSVGKKQGAARGTLAVAGLLGK    LP GGG GAA E TAPSSAV
Sbjct:  494 GGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAPLEPEGRAGXXXXXXXVGGVFGPGXXXXXXGMGMTRGGGFAGGRYADRNTRRHSTGHTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEAAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRMAEVIAFDASSGLVRLRPASTEDDNKDGGGAGSGAFVNDCTKGHTVGQQQQGSSSIIAESNTEEGSVPTSNGHNEGGFGGDSKGMEYPAAVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAGVSAEPTTDGRNKARSTSSGEVGGAEEDRELREGEEELEYSSLANVRVVRGPSMGELKKRKQALQKWNSLGPGGGILGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-KKAGRGGKXXXXXXXXXXXXGSARKQGGKGXXASPKSVGKKQGAARGTLAVAGLLGKCAGKLPTGGGRGAAEEGTAPSSAV 988          
BLAST of mRNA_E-siliculosus-1a_F_contig124.1497.1 vs. uniprot
Match: A0A662WRN2_9STRA (Coilin n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WRN2_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 5.030e-6
Identity = 44/123 (35.77%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  102 HSTGDTANGDGGSAKKRGRGG--WKKDYEVIASVESKAGEPAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRTAEVTAFDASSGLVRLLPASIEDDNKD 222
            H  GD A+ +G + K++G+    WK+ Y V+ASV  K  E +  AA+   +    A Y      P+  R QV+DVLAFKTL+L  ETW P LS ++  +V   D+S   + +   ++   N+D
Sbjct:  228 HGNGDMASSNGITPKRKGKWEERWKRPYVVVASVLDKKPEDSDGAASTADLTTMLAAYP--TSSPSPSRFQVKDVLAFKTLTLCLETWQPVLSEWQCGQVQTVDSSGSTIDVSNWTLAASNED 348          
BLAST of mRNA_E-siliculosus-1a_F_contig124.1497.1 vs. uniprot
Match: A0A662WP95_9STRA (Coilin n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WP95_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.380e-5
Identity = 43/118 (36.44%), Postives = 64/118 (54.24%), Query Frame = 0
Query:   94 YADRNSRRHSTGDTANGDGGSAKKRGRGG--WKKDYEVIASVESKAGEPAAEAAAAGSVENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRTAEVTAFDASSGLV 209
            Y   +   H  GD A+ +G + K++G+    WK+ Y V+A+V  K  E +  AA+A  +    A Y      P+  R QV+DVLAFKTL+L  ETW P LS ++  +V   D+S   +
Sbjct:  181 YERSSESTHGNGDMASSNGIAPKRKGKWEERWKRPYVVVATVLDKKLEDSDGAASAADLTTMLAAYP--TSSPSSSRFQVKDVLAFKTLTLCLETWQPVLSDWQCGQVQTVDSSGSTI 296          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig124.1497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FZW0_ECTSI1.060e-22788.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4H0_9PHAE9.830e-20084.27Coilin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=8... [more]
A0A662WRN2_9STRA5.030e-635.77Coilin n=1 Tax=Nothophytophthora sp. Chile5 TaxID=... [more]
A0A662WP95_9STRA1.380e-536.44Coilin n=1 Tax=Nothophytophthora sp. Chile5 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig124contigE-siliculosus-1a_F_contig124:8592..11263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig124.1497.1mRNA_E-siliculosus-1a_F_contig124.1497.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig124 8592..11263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig124.1497.1 ID=prot_E-siliculosus-1a_F_contig124.1497.1|Name=mRNA_E-siliculosus-1a_F_contig124.1497.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=506bp
GGRGRGGGGVGLGGGQQHWGGPLGRIVGQLRRPEGESESNGGGAAAATAP
LQPEGRAGGRDGSTARGGVFGPGRGIGRGGMGMTKGGGFAGGGYADRNSR
RHSTGDTANGDGGSAKKRGRGGWKKDYEVIASVESKAGEPAAEAAAAGSV
ENADARYVGYEELPTDMRPQVRDVLAFKTLSLNEETWTPELSPYRTAEVT
AFDASSGLVRLLPASIEDDNKDGGGGGSGGLVNGCTKGHTAGQQQQGSSS
GIAESNPEEGRVPTSNGHNRGGVSGDSKGTEDPAAVAASKGGGSDSRKEE
EESGSAAQQQEEPAAAEASPEPITDVGSKARSTSSGEVGGAEEDRALREG
EEELEYSSLANVRVVRGPSTGELEKRKQALQKWNSLGPGGGILGGSAAGN
NNNNSNNNSNTGVDSAAASAASLPSATPKKAGRGGRGRGRGRGGGGAGGS
SRKQGGKGKGASPKSVGKKQGAARGTLAVAGLLGKLPAGGGGGAAGEATA
PSSAV*
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