prot_E-siliculosus-1a_F_contig12396.1495.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12396.1495.1
Unique Nameprot_E-siliculosus-1a_F_contig12396.1495.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length69
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12396.1495.1 vs. uniprot
Match: D7FS13_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS13_ECTSI)

HSP 1 Score: 100 bits (249), Expect = 1.080e-23
Identity = 53/73 (72.60%), Postives = 58/73 (79.45%), Query Frame = 0
Query:    1 VRYLSLYHSRFLRFLTGHAPRVVSIAMSRTEDPFMTGSED--MRL--IMTPQFLAVLEFPPGHGVPYVAYDQQ 69
            VRYLSLY +RFLRF TGH  +VVSIAMS T+D FMTGS D  +RL  +  PQ LAVLEFPPGHG PYVAYDQQ
Sbjct:  110 VRYLSLYDNRFLRFFTGHTDKVVSIAMSPTDDHFMTGSADKTVRLWHLSRPQCLAVLEFPPGHGTPYVAYDQQ 182          
BLAST of mRNA_E-siliculosus-1a_F_contig12396.1495.1 vs. uniprot
Match: A0A090M349_OSTTA (WD40/YVTN repeat-like-containing domain n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M349_OSTTA)

HSP 1 Score: 54.7 bits (130), Expect = 5.060e-7
Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 VRYLSLYHSRFLRFLTGHAPRVVSIAMSRTEDPFMTGSEDMRL----IMTPQFLAVLEFPPGHGVPYVAYDQQ 69
            VRY SL+ + ++R+  GH+  V SIAMS T D F+T   D+ +    + TP+  A +  P    +PYVAYD Q
Sbjct:   98 VRYHSLHDNTYVRYFKGHSDAVTSIAMSATNDNFLTAGADLTVRLWDLRTPKCCAAI--PQCPAIPYVAYDAQ 168          
BLAST of mRNA_E-siliculosus-1a_F_contig12396.1495.1 vs. uniprot
Match: A0A7S0Z9J6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7S0Z9J6_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 8.320e-6
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    1 VRYLSLYHSRFLRFLTGHAPRVVSIAMSRTEDPFMTGSED--MRL--IMTPQFLAVLEFPPGHGVPYVAYDQQ 69
            VRY SL+ + +LR+  GH   V S+AMS T D F++ S D  +RL  + TP   AV+   P   +P VAYD Q
Sbjct:  105 VRYHSLHDNTYLRYFKGHTDAVTSLAMSATNDNFLSASADRTVRLWDLRTPTCCAVIPDTP--AIPTVAYDAQ 175          
BLAST of mRNA_E-siliculosus-1a_F_contig12396.1495.1 vs. uniprot
Match: W7TLY5_9STRA (Wd repeat-containing protein 82 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLY5_9STRA)

HSP 1 Score: 49.3 bits (116), Expect = 4.190e-5
Identity = 21/40 (52.50%), Postives = 30/40 (75.00%), Query Frame = 0
Query:    1 VRYLSLYHSRFLRFLTGHAPRVVSIAMSRTEDPFMTGSED 40
            +RYLSLY +++LRF +GH  RV  +AMS T+D F++ S D
Sbjct:  137 IRYLSLYDNQYLRFFSGHEARVTGLAMSYTDDRFLSASMD 176          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12396.1495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FS13_ECTSI1.080e-2372.60Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A090M349_OSTTA5.060e-741.10WD40/YVTN repeat-like-containing domain n=2 Tax=Os... [more]
A0A7S0Z9J6_9CHLO8.320e-643.84Hypothetical protein (Fragment) n=1 Tax=Ostreococc... [more]
W7TLY5_9STRA4.190e-552.50Wd repeat-containing protein 82 n=2 Tax=Monodopsid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12396contigE-siliculosus-1a_F_contig12396:575..1530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12396.1495.1mRNA_E-siliculosus-1a_F_contig12396.1495.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12396 575..1531 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12396.1495.1 ID=prot_E-siliculosus-1a_F_contig12396.1495.1|Name=mRNA_E-siliculosus-1a_F_contig12396.1495.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=69bp
VRYLSLYHSRFLRFLTGHAPRVVSIAMSRTEDPFMTGSEDMRLIMTPQFL
AVLEFPPGHGVPYVAYDQQ
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