prot_E-siliculosus-1a_F_contig12385.1488.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12385.1488.1
Unique Nameprot_E-siliculosus-1a_F_contig12385.1488.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length279
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12385.1488.1 vs. uniprot
Match: D7FJL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJL7_ECTSI)

HSP 1 Score: 423 bits (1087), Expect = 6.650e-135
Identity = 242/279 (86.74%), Postives = 246/279 (88.17%), Query Frame = 0 
Query:    1 LQEAFASVVVSWTHAGVRRSGLMTPVGQSQDLLDVLTDTHPVAAASAPAPRLCAPDPIPTPVSGAGRVSAVGDRTHASRPAVMGGHDTPRSRARRASARALDNGWPANGEELAATQAGAASTARQQEEVVHLAGAHMTSAPQLAARAPQSTARDYGRASGTSRPSAKAAPAASATLPSRGDVLAASLARIRGEASGGDHVGTGGIPATTSPARAAATGGCGSSEHALPSAMAEPVPWTAQLSCWRDASSFQDPPTTGSNGNGGATSSGGEFGGARSEGK 279
            L+EAFASVVVSWTHAGVRRSGL+TP  QSQDL  VLTDT+PV AASAPAPRLCAPD IPTPVSG GRVS VGDRTHA RPAVMGGH        RA ARALDNGWPANGEE AATQAG ASTARQQEEV HLAGAHMTSAPQLAARA QSTARDYGRASGTSRPSAKAAPAA ATLPSRG VLAASLAR RGEASGGDHV  GG PATTSPARAA TGG GSSEHA+PSAMAEPVP TAQLSCWR ASSFQDPP TGSNGNGGATSSGGEFGGARSEGK
Sbjct:  476 LEEAFASVVVSWTHAGVRRSGLVTPARQSQDLHAVLTDTYPVGAASAPAPRLCAPDAIPTPVSGEGRVSVVGDRTHALRPAVMGGH--------RAPARALDNGWPANGEEFAATQAGPASTARQQEEVAHLAGAHMTSAPQLAARAAQSTARDYGRASGTSRPSAKAAPAALATLPSRGGVLAASLARNRGEASGGDHVRIGGTPATTSPARAAETGGGGSSEHAVPSAMAEPVPSTAQLSCWRGASSFQDPPITGSNGNGGATSSGGEFGGARSEGK 746
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BLAST of mRNA_E-siliculosus-1a_F_contig12385.1488.1 vs. uniprot
Match: A0A6H5KW95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW95_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 1.120e-122
Identity = 237/344 (68.90%), Postives = 243/344 (70.64%), Query Frame = 0 
Query:   10 VSWTHAGVRRSGLMTPVGQSQDLLDVLTDTHPVAAASAPAPRLCAPDPIPTPVSGAGRVSAVGDRTHASRPAVMGGHDTPRSRARRASARALDNGWPANGEELAATQAGAASTARQQEEVVHLAGAHMTSAPQLAARAPQSTARDYGRASGTSRPSAKAAPAASATLPSRGDVLAASLARIR--------------------------------------------------------------------------GEASGGDHVGTGGIPATTSPARAAATGGCGSSEHALPSAMAEPVPWTAQLSCWRDASSFQDPPTTGSNGNGGATSSGGEFGGARSEGK 279
            +SWT+AGVRRSGLM PV QSQDL  VLTDT+PVAAASAPAPRLCAPDPIPTPVSGAGRVSAVG RTHASRPAVMGGHDTPRSRARRAS RALDN WPANGEE AATQAGAASTARQQEEVVHLAGAHMTSAPQLAARA QSTAR Y  ASGTS P A+AAPAASATLPSR  VLAASL R R                                                                          GEASGGDHV TGG PATTSPA+AA TGG GS EHA+P AMAEPVP TAQLSCWRDASSFQDPP TGSNGNGGAT SGGEFGGARSEGK
Sbjct:    1 MSWTYAGVRRSGLMAPVVQSQDLRAVLTDTYPVAAASAPAPRLCAPDPIPTPVSGAGRVSAVGYRTHASRPAVMGGHDTPRSRARRASTRALDNRWPANGEEFAATQAGAASTARQQEEVVHLAGAHMTSAPQLAARAAQSTARHYPGASGTSSPPARAAPAASATLPSRRGVLAASLVRNRVGTGGSGLQEASRVPMASTAAAAGSPDHASGRRPTRTGKAGGGADPGAGPNATAAXXXXXXXXRSGAAIAPSNKGEASGGDHVETGGTPATTSPAQAAETGGGGSREHAVPPAMAEPVPSTAQLSCWRDASSFQDPPITGSNGNGGATPSGGEFGGARSEGK 344
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12385.1488.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FJL7_ECTSI6.650e-13586.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KW95_9PHAE1.120e-12268.90Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12385contigE-siliculosus-1a_F_contig12385:1..1590 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12385.1488.1mRNA_E-siliculosus-1a_F_contig12385.1488.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12385 1..1590 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12385.1488.1 ID=prot_E-siliculosus-1a_F_contig12385.1488.1|Name=mRNA_E-siliculosus-1a_F_contig12385.1488.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=279bp
LQEAFASVVVSWTHAGVRRSGLMTPVGQSQDLLDVLTDTHPVAAASAPAP
RLCAPDPIPTPVSGAGRVSAVGDRTHASRPAVMGGHDTPRSRARRASARA
LDNGWPANGEELAATQAGAASTARQQEEVVHLAGAHMTSAPQLAARAPQS
TARDYGRASGTSRPSAKAAPAASATLPSRGDVLAASLARIRGEASGGDHV
GTGGIPATTSPARAAATGGCGSSEHALPSAMAEPVPWTAQLSCWRDASSF
QDPPTTGSNGNGGATSSGGEFGGARSEGK
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