prot_E-siliculosus-1a_F_contig1238.1486.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1238.1486.1
Unique Nameprot_E-siliculosus-1a_F_contig1238.1486.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length208
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: D8LIJ3_ECTSI (DUF4149 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LIJ3_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 9.130e-133
Identity = 203/207 (98.07%), Postives = 206/207 (99.52%), Query Frame = 0
Query:    1 MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207
            MGVLDLMLPWITRAA+LVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSA+SDGD GSTVGATPFLVAVACVVANLVFFSPQTTITMMER+RVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL
Sbjct:    1 MGVLDLMLPWITRAAILVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSARSDGDDGSTVGATPFLVAVACVVANLVFFSPQTTITMMERSRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A1E7FD76_9STRA (DUF4149 domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FD76_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.720e-30
Identity = 76/179 (42.46%), Postives = 102/179 (56.98%), Query Frame = 0
Query:   41 LRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVA-GFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELGVD-----------RKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLSL 207
            L + HL +FS WFG SVWVSF AGIV+ + +   TFG  Q+KLF AYF FS   + +A G +G  LSS+S+                +V +AC++ NL +F P TT  M +R+ V K LG             +K+ DPQ++ LSK FGM HG++ L+NL AL  G V L   AER+ L
Sbjct:   47 LMLIHLLAFSSWFGCSVWVSFPAGIVMFKTLPRHTFGRLQSKLFPAYFLFSAGAIIIAIGTSGDLLSSTSNXXXXXXXXXXXIPYSLIVILACILINLFYFEPATTRVMYQRHAVEKRLGTGHEIGQLRPTDPKKANDPQLKALSKTFGMLHGVSTLLNLAALGFGCVWLSKCAERMVL 225          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A7S4ATM5_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ATM5_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.490e-27
Identity = 72/173 (41.62%), Postives = 98/173 (56.65%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAV-ACVVANLVFFSPQTTITMMERNRVCKELGVD-----------RKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERL 205
            HL +FS WFG SVWVSFIAGIV+ + +    FG  Q+KLF AYF FS   + VA  T +AL+ S    S     ST      L+A+ AC + NL++F P TT  M +R+ V K LG             +K+ DPQ++ LSK FGM HG++ L+NL +L  G       A+++
Sbjct:   50 HLLAFSSWFGCSVWVSFIAGIVMFKTLPRHVFGRLQSKLFPAYFVFSAGAIVVAIATSSALTKSREEAS-----STNNIPYSLIAILACTLLNLLYFEPATTKVMFQRHAVEKRLGTGHEIGKIRPDDPKKANDPQLKALSKTFGMLHGVSTLLNLGSLGFGCAWFSKCADQM 217          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A7S4MCN5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MCN5_9STRA)

HSP 1 Score: 112 bits (279), Expect = 3.340e-27
Identity = 77/195 (39.49%), Postives = 109/195 (55.90%), Query Frame = 0
Query:   15 AVLVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELGVDR-----------KSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHL 198
            AVL +  L T T+L   S++   +  L + HL +FS WFG SVWVSF++G+V+ R +    FG  Q++LF AYF++S + +AVA  T  AL   ++                LV +A V+ NL+F  P+TT  M +R+ V K LG              K+ DP++R LSK+FGM HGI++L NL AL  G V L
Sbjct:   23 AVLAACALGTRTSL--ESEVGHHRHYLVLVHLLAFSSWFGCSVWVSFVSGLVMFRNLPRHVFGRLQSRLFPAYFQYSAVTVAVAILTAGALGWRTNV--------------LLVVMATVLLNLLFLEPETTRIMYKRHAVEKRLGTGHEVGQLKPDDPVKANDPELRALSKKFGMLHGISSLTNLAALGFGCVWL 201          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A7R9VXI6_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VXI6_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.450e-26
Identity = 72/170 (42.35%), Postives = 98/170 (57.65%), Query Frame = 0
Query:   41 LRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAV-ACVVANLVFFSPQTTITMMERNRVCKELGVDR-----------KSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHL 198
            L + HL +FS WFG SVWVSF+AG+V+ R +    FG  Q++LF  YF+FS L +AVA F+  A+           G +  G    LVAV   V+ NL+F  P+TT  M +R+ V K LG              K+ DP++R LSK+FGM HG+++L+NL AL  G V L
Sbjct:   51 LLLVHLLAFSSWFGCSVWVSFVAGLVMFRNLPRHVFGRLQSRLFPVYFRFSALNVAVAIFSAGAV-----------GWNAYG----LVAVMGTVLLNLLFLEPETTRIMFKRHTVEKRLGTGHEVGQLKPDDLEKANDPELRALSKKFGMLHGMSSLMNLAALGFGCVWL 205          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A7S1BIS9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BIS9_9STRA)

HSP 1 Score: 99.8 bits (247), Expect = 2.320e-22
Identity = 70/197 (35.53%), Postives = 105/197 (53.30%), Query Frame = 0
Query:   21 VLLTLTTLRRHSDIPLSQATLRVAHLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELGVDR-----------KSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERLS 206
            +L+  T+L   SD P S+  L + HL + + WFG SVWVS +AG+V  RA+    FG   A+LF  YF FS + +++A           +A + G G         L  VA   ANL++  P+TT  M  R+ V + LG              K+ DP++R L+K+FGM HGI+ L+NL+A+  G V    LA++++
Sbjct:   38 ILILATSLAPPSD-PRSRKALLLLHLLACASWFGCSVWVSCVAGLVTFRALPRHVFGRLMARLFPVYFNFSAVTVSLA-----------AAAARGLGWPIAWLAAILGTVA---ANLLYLEPETTRVMFLRHVVERRLGTGHEVGQLKPSDPAKANDPELRALTKKFGMLHGISTLLNLMAMGFGCVWFSILAQKIT 219          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A0G4GGW2_9ALVE (DUF4149 domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GGW2_9ALVE)

HSP 1 Score: 97.4 bits (241), Expect = 4.580e-21
Identity = 65/181 (35.91%), Postives = 93/181 (51.38%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAV--------AGFTGAALSSSSSAQSDGDGGSTVGATPFLVAV-ACVVANLVFFSPQTTITMMERNRVCKELGVDR-----------KSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCALAERL 205
            HL  F+ WFG SVWVSF+AG+V+  ++    FG  QAKLF  YF+FS+LC++V        A F G++       Q +            L+AV   ++ NL++F P TT  M  R+ V + LG              K+ DP++  LS RFG  HG +  +NL+ L  G  H+C +  RL
Sbjct:   99 HLFFFASWFGCSVWVSFVAGLVMFYSLPRHVFGQLQAKLFPRYFQFSVLCISVCLALEVCAAKFRGSSKCMPREQQMN------------LIAVWGILLLNLLYFEPVTTKVMFLRHAVERRLGTGHEVGQLRPWDPVKAKDPELVSLSARFGKLHGCSTSLNLLGLGLGCWHICWIGARL 267          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A0G4ETH3_VITBC (DUF4149 domain-containing protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ETH3_VITBC)

HSP 1 Score: 95.1 bits (235), Expect = 9.890e-21
Identity = 56/156 (35.90%), Postives = 90/156 (57.69%), Query Frame = 0
Query:   48 SFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELG-----------VDRKSPDPQVRKLSKRFGMFHGIANLINLVALA 192
            S+ + FG+ VWVS ++GI++ R V   TFG  Q+KLF AYF+ S +C ++     A L  S+       G          +++A  + NLV+  PQTT TM ER+ + +ELG           V++   + ++++L+K+FGM+HGI++L NL+ LA
Sbjct:   42 SWGILFGSQVWVSLVSGIIMFRTVPRHTFGKLQSKLFPAYFQLSTICSSLLTIATAVLMPSNRLLHTCAG----------LSLASSLVNLVYLEPQTTATMYERHAIERELGIGVSMKDDPASVEKAKANTELQRLNKKFGMYHGISSLSNLIGLA 187          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A8J1W0M4_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1W0M4_9DINO)

HSP 1 Score: 92.0 bits (227), Expect = 3.970e-19
Identity = 62/174 (35.63%), Postives = 93/174 (53.45%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFT----GAALSSSSSAQSDGDGGSTVGATP------FLVAVACVVANLVFFSPQTTITMMERNRVCKELGVDR-----------KSPDPQVRKLSKRFGMFHGIANLINLVALACGAVH 197
            H+  F+ WFG S+WVSF+AG+V+   +    FG  QAKLF  YF+FS++ ++ A       G+ L  ++ A+       TV A P          +  ++ NL++F P+TT  M ER++V  +LG              K+ DP++  LSKRFG  HGI+  +NL+AL  G  H
Sbjct:   80 HVFCFASWFGCSMWVSFVAGLVMFNNLPRHVFGRLQAKLFPRYFQFSVIFVSCALLPHLVPGSVLERTALAK-------TV-ALPQNQQFNLAAIIGILLLNLLYFEPRTTAVMFERHKVEVKLGTGHEIGQLKPSDPAKANDPELVALSKRFGKLHGISTSLNLIALCLGVWH 245          
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Match: A0A7S4VXE3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VXE3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.460e-18
Identity = 55/164 (33.54%), Postives = 83/164 (50.61%), Query Frame = 0
Query:   45 HLCSFSVWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGFTGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMMERNRVCKELGVD-----------RKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVH 197
            HL SF+ +FG S+WVSF+AG+V+ + +    FG  QAKLF  YF+F L+                          TVG        + ++ NL +F P+TT  M ER+ V ++LG             +K+ D ++RKL+K+FG  HG++  +NL+ L  G  H
Sbjct:   67 HLFSFASFFGCSMWVSFVAGLVMFKNMPRHDFGRLQAKLFPRYFQFCLI--------------------------TVGICLAQEVPSQIMMNLKYFEPRTTAVMFERHIVERKLGTGHEVGQLKPSDPQKANDHELRKLTKKFGKLHGMSTSLNLIGLCLGMWH 204          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1238.1486.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ3_ECTSI9.130e-13398.07DUF4149 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A1E7FD76_9STRA2.720e-3042.46DUF4149 domain-containing protein n=1 Tax=Fragilar... [more]
A0A7S4ATM5_9STRA1.490e-2741.62Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
A0A7S4MCN5_9STRA3.340e-2739.49Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7R9VXI6_9STRA1.450e-2642.35Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1BIS9_9STRA2.320e-2235.53Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A0G4GGW2_9ALVE4.580e-2135.91DUF4149 domain-containing protein n=1 Tax=Chromera... [more]
A0A0G4ETH3_VITBC9.890e-2135.90DUF4149 domain-containing protein n=3 Tax=Vitrella... [more]
A0A8J1W0M4_9DINO3.970e-1935.63Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S4VXE3_9STRA5.460e-1833.54Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025423Domain of unknown function DUF4149PFAMPF13664DUF4149coord: 48..152
e-value: 8.8E-19
score: 67.7
NoneNo IPR availablePANTHERPTHR23241LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATEDcoord: 10..207
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..45
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 203..207
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..105
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..116
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..181
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..202
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 68..86
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..67
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availableTMHMMTMhelixcoord: 49..71
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 83..105
NoneNo IPR availableTMHMMTMhelixcoord: 176..198
NoneNo IPR availableTMHMMTMhelixcoord: 120..142

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1238contigE-siliculosus-1a_F_contig1238:26665..28512 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1238.1486.1mRNA_E-siliculosus-1a_F_contig1238.1486.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1238 26591..29076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1238.1486.1 ID=prot_E-siliculosus-1a_F_contig1238.1486.1|Name=mRNA_E-siliculosus-1a_F_contig1238.1486.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=208bp
MGVLDLMLPWITRAAVLVSVVLLTLTTLRRHSDIPLSQATLRVAHLCSFS
VWFGTSVWVSFIAGIVLMRAVTMETFGLAQAKLFDAYFKFSLLCLAVAGF
TGAALSSSSSAQSDGDGGSTVGATPFLVAVACVVANLVFFSPQTTITMME
RNRVCKELGVDRKSPDPQVRKLSKRFGMFHGIANLINLVALACGAVHLCA
LAERLSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025423DUF4149