prot_E-siliculosus-1a_F_contig1237.1481.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1237.1481.1
Unique Nameprot_E-siliculosus-1a_F_contig1237.1481.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length193
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1481.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 141..159
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..193
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..135
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 136..140
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 118..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1237contigE-siliculosus-1a_F_contig1237:34485..35063 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1237.1481.1mRNA_E-siliculosus-1a_F_contig1237.1481.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1237 34321..35063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1237.1481.1 ID=prot_E-siliculosus-1a_F_contig1237.1481.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1481.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=193bp
MINTCARHSRGHPTGTMAAPAHACRRIVKYQHVFNFRVLVRQVGGDFVAP
VGCRIHVCCIFICSRCCFVFLASFLRSRQKIVVIRLHCCSLPDAGGTRCS
REGLAVLPRHGVNKTRKLVFLEVCPTSTAAAVVGGSDRIGWMDIVTGLIW
SVACVFFYLHMKGRSLERREAAAGGEGQKKERKKKTLIIEQVC
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