prot_E-siliculosus-1a_F_contig1237.1476.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1237.1476.1
Unique Nameprot_E-siliculosus-1a_F_contig1237.1476.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length156
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig1237.1476.1 vs. uniprot
Match: D8LL38_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL38_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 2.650e-60
Identity = 127/145 (87.59%), Postives = 128/145 (88.28%), Query Frame = 0 
Query:   15 RTDGGNLVEIVAEFQGRLRRQVQAALADGXXXXXXXX----CSADVGDDDGRIRRGSTSAAVARSSSFSQVTTVGLVDDGDAPPRARLRRQAPADSRGASLITHRRLKDGPFSGRAXXXXXXXXXXGGRGGGDVLDELEKRIGSV 155
            RTDGGNLVEIVAEFQGRLRRQVQAALADG XXXXXXX    CSADVGDDDGRIRRGSTSAAVA+SSSFSQVTTVGLVDDGDAPPRARLRRQAPADSRGASLITHRRL DGPFSGRA          GGRGGGDVL ELEKRIGSV
Sbjct: 1061 RTDGGNLVEIVAEFQGRLRRQVQAALADGDXXXXXXXXXXTCSADVGDDDGRIRRGSTSAAVAQSSSFSQVTTVGLVDDGDAPPRARLRRQAPADSRGASLITHRRLNDGPFSGRAA---------GGRGGGDVLGELEKRIGSV 1196
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1237.1476.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL38_ECTSI2.650e-6087.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1237contigE-siliculosus-1a_F_contig1237:3478..3945 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1237.1476.1mRNA_E-siliculosus-1a_F_contig1237.1476.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1237 3327..3985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1237.1476.1 ID=prot_E-siliculosus-1a_F_contig1237.1476.1|Name=mRNA_E-siliculosus-1a_F_contig1237.1476.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=156bp
MRASEDGAGGGGGGRTDGGNLVEIVAEFQGRLRRQVQAALADGGGGGGGG
TCSADVGDDDGRIRRGSTSAAVARSSSFSQVTTVGLVDDGDAPPRARLRR
QAPADSRGASLITHRRLKDGPFSGRAKDGPFSGRAAGGRGGGDVLDELEK
RIGSV*
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