prot_E-siliculosus-1a_F_contig1233.1459.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1233.1459.1
Unique Nameprot_E-siliculosus-1a_F_contig1233.1459.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length207
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: D8LJ72_ECTSI (Photosystem II 11 kDa protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ72_ECTSI)

HSP 1 Score: 358 bits (919), Expect = 2.900e-124
Identity = 196/206 (95.15%), Postives = 199/206 (96.60%), Query Frame = 0
Query:    1 MKTFAACTLALVAGDLAAAFTGPLAARTGATSVARASSSSAVCMSVADEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            MKTFAACT+ALVAGDLAAAFTGPLAARTGATS     SSSAVCMSV DEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPP+DWGLTKQYYPDASKMVRHMRYCTNMEKGDP MADIANNCKKEMVEFVSNYRRS+NINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR
Sbjct:    1 MKTFAACTIALVAGDLAAAFTGPLAARTGATSXXXXXSSSAVCMSVGDEAMSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPSDWGLTKQYYPDASKMVRHMRYCTNMEKGDPYMADIANNCKKEMVEFVSNYRRSSNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A836C8X1_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8X1_9STRA)

HSP 1 Score: 174 bits (440), Expect = 9.530e-52
Identity = 91/140 (65.00%), Postives = 110/140 (78.57%), Query Frame = 0
Query:   79 AAEEAAAPAPA-AVSEDGPPN-----------DWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            AA  AAA APA A++ DG P            DWGLTK YY DASK+V HMRY T+MEKG  N+ ++A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRL++EY+ I++AIKRQR
Sbjct:   45 AAAGAAAVAPALAIAADGTPAVEKVPLGPMPVDWGLTKDYYTDASKVVSHMRYATSMEKGAANIENVAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLMEEYSQIDKAIKRQR 184          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A836CEQ5_9STRA (Photosystem II Pbs27-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEQ5_9STRA)

HSP 1 Score: 170 bits (431), Expect = 3.180e-50
Identity = 88/126 (69.84%), Postives = 102/126 (80.95%), Query Frame = 0
Query:   82 EAAAPAPAAVSEDGP-PNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            E AAPA A +   GP P DWGLTK YY DASK+V HMRY T++EKG   +   A NC++EM++FVS YRR  N++GKLSYSNLYTSI+VLAGHYASYGPKFPVPEKRRKRLL+EY  IE+AIKRQR
Sbjct:   74 EDAAPAKAPL---GPMPTDWGLTKDYYTDASKVVSHMRYATSLEKGAAGIEMTAKNCRQEMIDFVSYYRRFPNVSGKLSYSNLYTSINVLAGHYASYGPKFPVPEKRRKRLLEEYNQIEKAIKRQR 196          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A7S3ZPN6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZPN6_9STRA)

HSP 1 Score: 162 bits (410), Expect = 6.950e-48
Identity = 80/125 (64.00%), Postives = 97/125 (77.60%), Query Frame = 0
Query:   82 EAAAPAPAAVSEDGPPNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            EA APAP        P DWG+T  YY DA+K+V HMR  T++EKG PNM  IA NCKKEM++FVS YRR TN++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY ++E+ IK++R
Sbjct:   15 EAEAPAPVEF-----PKDWGITSDYYTDAAKVVAHMRLATSLEKGAPNMEMIALNCKKEMIDFVSFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLFQEYAEVEKNIKKRR 134          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A7S2UVY8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVY8_9STRA)

HSP 1 Score: 156 bits (394), Expect = 2.360e-44
Identity = 80/129 (62.02%), Postives = 100/129 (77.52%), Query Frame = 0
Query:   80 AEEAAAPAPAAVSED-GP-PNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            AEEA APA A    D GP P D+ +  +YYPDA  +V++MRY T M+KG PNM  I  + +K+MV+FV+ YRR+  +NG+LSYS LYTSI+VLAGHYASYGPKFPVPEKRRKRLLQEY DIE+ +++ R
Sbjct:   90 AEEAVAPAAAPAKPDMGPVPTDFKVKGEYYPDAILLVKNMRYATLMDKGTPNMEQIGKSVRKQMVDFVAQYRRNNKVNGRLSYSTLYTSINVLAGHYASYGPKFPVPEKRRKRLLQEYNDIEKNMRKNR 218          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A7R9U8B8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8B8_9STRA)

HSP 1 Score: 155 bits (393), Expect = 2.490e-44
Identity = 76/120 (63.33%), Postives = 90/120 (75.00%), Query Frame = 0
Query:   87 APAAVSEDGPPNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            APA+     PP DWGL+ QYY DA ++V HMRY T M K  PN   IA NCKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRLLQEY +IE+ IKR R
Sbjct:   89 APASTELGPPPTDWGLSNQYYDDAVRVVNHMRYATIMPKSTPNYEAIATNCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGVKFPVPEKRKKRLLQEYAEIEKNIKRSR 208          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A7S1XRA0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XRA0_9STRA)

HSP 1 Score: 155 bits (391), Expect = 4.430e-44
Identity = 75/115 (65.22%), Postives = 91/115 (79.13%), Query Frame = 0
Query:   93 EDGP-PNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            E GP P DWGLT +YY DA ++V HMRY T+M KG PN  +IA +CKKEM++FVS YRR  N+ GK S+S LYT+I+VLAGHY +YG KFPVPEKR+KRL QEY +IE+ IKRQR
Sbjct:   90 ELGPAPTDWGLTNEYYKDAPRVVSHMRYATSMPKGTPNYENIAKSCKKEMIDFVSFYRRFPNVAGKPSFSTLYTAINVLAGHYTNYGLKFPVPEKRKKRLFQEYAEIEKNIKRQR 204          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: W7TYA6_9STRA (Photosystem ii 11 kd protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TYA6_9STRA)

HSP 1 Score: 145 bits (365), Expect = 2.440e-40
Identity = 73/129 (56.59%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   78 FAAEEAAAPAPAAVSEDGPPNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
             AAEE   P  A V    PP ++ L+K+YY DA+++V HM+Y T M +  PN  +IA + K EM +FVS YRR  N+ GK S+S LYT+I+V+AGHYASYGPKFP+PEKRRKRL QE+T+I+R IKR R
Sbjct:   62 LAAEEGGVPTAAPVDLGVPPVNFDLSKEYYKDAAQVVNHMKYATFMNRDTPNYENIAKSVKNEMTDFVSYYRRFNNVAGKPSFSTLYTAINVMAGHYASYGPKFPIPEKRRKRLQQEFTEIDRNIKRNR 190          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: A0A7S3NKQ6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NKQ6_9STRA)

HSP 1 Score: 142 bits (359), Expect = 1.590e-39
Identity = 68/110 (61.82%), Postives = 86/110 (78.18%), Query Frame = 0
Query:   97 PNDWGLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            P ++G+T+ YY DA+K+V HMR  T+++KG PN+  IA   KKEM  FV+ YRR T + GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY +IE+ IKR+R
Sbjct:   74 PTNYGITQDYYTDAAKVVAHMRLATSLDKGSPNIEQIAIETKKEMNAFVAFYRRFTTVTGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYDEIEKNIKRKR 183          
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Match: F0YDF6_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDF6_AURAN)

HSP 1 Score: 139 bits (350), Expect = 3.150e-39
Identity = 66/101 (65.35%), Postives = 83/101 (82.18%), Query Frame = 0
Query:  106 YYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRRSTNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIERAIKRQR 206
            YY DA K+V HMR  T+++KG P+M  IA N KKEM++FV+ YRR TN++GK S+S LYT+I+VLAGHY SYGPKFPVPEKRRKRL QEY +IE+ IK++R
Sbjct:    2 YYTDAQKVVAHMRLATSLDKGAPDMEKIALNTKKEMIDFVAFYRRFTNVSGKQSFSTLYTAINVLAGHYTSYGPKFPVPEKRRKRLYQEYAEIEKNIKKRR 102          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1233.1459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJ72_ECTSI2.900e-12495.15Photosystem II 11 kDa protein n=2 Tax=Ectocarpus T... [more]
A0A836C8X1_9STRA9.530e-5265.00Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A836CEQ5_9STRA3.180e-5069.84Photosystem II Pbs27-domain-containing protein n=1... [more]
A0A7S3ZPN6_9STRA6.950e-4864.00Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2UVY8_9STRA2.360e-4462.02Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9U8B8_9STRA2.490e-4463.33Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1XRA0_9STRA4.430e-4465.22Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
W7TYA6_9STRA2.440e-4056.59Photosystem ii 11 kd protein n=2 Tax=Monodopsidace... [more]
A0A7S3NKQ6_9STRA1.590e-3961.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YDF6_AURAN3.150e-3965.35Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038450Photosystem II Pbs27 superfamilyGENE3D1.20.58.810coord: 96..206
e-value: 1.4E-39
score: 136.5
IPR025585Photosystem II Pbs27PFAMPF13326PSII_Pbs27coord: 60..202
e-value: 5.2E-29
score: 101.4
IPR025585Photosystem II Pbs27PANTHERPTHR34041FAMILY NOT NAMEDcoord: 34..206
IPR025585Photosystem II Pbs27HAMAPMF_01481PSII_Psb27coord: 62..202
score: 24.322
NoneNo IPR availablePANTHERPTHR34041:SF1PHOTOSYSTEM II REPAIR PROTEIN PSB27-H1, CHLOROPLASTICcoord: 34..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.64
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1233contigE-siliculosus-1a_F_contig1233:15419..21005 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1233.1459.1mRNA_E-siliculosus-1a_F_contig1233.1459.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1233 15229..21046 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1233.1459.1 ID=prot_E-siliculosus-1a_F_contig1233.1459.1|Name=mRNA_E-siliculosus-1a_F_contig1233.1459.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=207bp
MKTFAACTLALVAGDLAAAFTGPLAARTGATSVARASSSSAVCMSVADEA
MSRKNAIAAFSAGAAAVLGAAAVPAAVFAAEEAAAPAPAAVSEDGPPNDW
GLTKQYYPDASKMVRHMRYCTNMEKGDPNMADIANNCKKEMVEFVSNYRR
STNINGKLSYSNLYTSISVLAGHYASYGPKFPVPEKRRKRLLQEYTDIER
AIKRQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025585PSII_Pbs27
IPR038450PSII_Pbs27_sf