prot_E-siliculosus-1a_F_contig12262.1428.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig12262.1428.1
Unique Nameprot_E-siliculosus-1a_F_contig12262.1428.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length548
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A101D1K3_9GAMM (ATP-dependent helicase HrpA n=40 Tax=root TaxID=1 RepID=A0A101D1K3_9GAMM)

HSP 1 Score: 1031 bits (2667), Expect = 0.000e+0
Identity = 518/548 (94.53%), Postives = 534/548 (97.45%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEG+CIRLYSEEDFL+RPGFTDPEIQRTNLASVILSMLGLKLGDIE FPFVDPPDSRFVKDGFRLLFELGAVDE+QRLSPLGRKL+RLPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLW+GIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDI+VPAPP R+E     QARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKW+MAFELIET+KLFARTVAKIEPQWIEPQAQHL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+GTFF HNRALIDEVEALEDRARRRDILVDEETLF+FYDERIPAEIVNGKGFEHWRKQAEQ+DP LLHFDLDS+KAR A D+TQ QYP
Sbjct:  338 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGVCIRLYSEEDFLARPGFTDPEIQRTNLASVILSMLGLKLGDIEDFPFVDPPDSRFVKDGFRLLFELGAVDEKQRLSPLGRKLSRLPIDPRLARMVLAGAEYGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWYGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIDVPAPPXRNEEXXXXQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWIMAFELIETTKLFARTVAKIEPQWIEPQAQHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGTFFAHNRALIDEVEALEDRARRRDILVDEETLFSFYDERIPAEIVNGKGFEHWRKQAEQQDPQLLHFDLDSLKARDAGDVTQAQYP 885          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A6M1SF63_HALSX (ATP-dependent RNA helicase HrpA n=44 Tax=Halomonadaceae TaxID=28256 RepID=A0A6M1SF63_HALSX)

HSP 1 Score: 992 bits (2564), Expect = 0.000e+0
Identity = 492/548 (89.78%), Postives = 522/548 (95.26%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+LKGT+ILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E +SQASANQRKGRCGR+AEG+CIRLY E+DFL+RP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPD RF+KDGFRLLFELGAVD++ +LSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPR+RPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP P PRDE    EQARQARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLA+KSPKW+MAFELIET+KLFARTVAKI+PQWIEPQAQHL+K SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRG FF HNRALI EVEALEDRARRRDILVDEE+LFAFYDERIPA+IVNGKGFEHWRKQAEQ+ P LL FDL+++KAR A D+TQ QYP
Sbjct:  343 RADLKGTDILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPISQASANQRKGRCGRVAEGVCIRLYDEDDFLARPAFTDPEIQRTNLASVILSMLALKLGHIEDFPFVDPPDGRFIKDGFRLLFELGAVDDKHQLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRERPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPPPLPRDEDXXXEQARQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLARKSPKWVMAFELIETTKLFARTVAKIDPQWIEPQAQHLVKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGAFFAHNRALIAEVEALEDRARRRDILVDEESLFAFYDERIPADIVNGKGFEHWRKQAEQQQPELLKFDLEALKARDAHDVTQAQYP 890          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A433L7D8_9GAMM (ATP-dependent RNA helicase HrpA n=13 Tax=Halomonas TaxID=2745 RepID=A0A433L7D8_9GAMM)

HSP 1 Score: 992 bits (2564), Expect = 0.000e+0
Identity = 493/548 (89.96%), Postives = 521/548 (95.07%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+LKGTEILPLYARLSNEEQNRVF  HRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGR+AEG+CIRLY EEDFLSRPGFTDPEIQRTNLASVILSML LKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDE  RLSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVPAP P+D+ +SE      RRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKW+MAFELIET+KL+ARTVAKI+PQWIEPQAQHL+KRSYSEPHWE KRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEF T+GTFF HNRALIDEVEALEDRARRRDILVDEETL+AFYDER+P +IVNG GFEHWRKQAE++ P LLHFD++++KAR A D+TQ QYP
Sbjct:  338 RADLKGTEILPLYARLSNEEQNRVFTAHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRVAEGVCIRLYDEEDFLSRPGFTDPEIQRTNLASVILSMLALKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEGYRLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPAPLPKDDEQSEXXXXXXRRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWVMAFELIETTKLYARTVAKIDPQWIEPQAQHLVKRSYSEPHWEQKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFTTQGTFFAHNRALIDEVEALEDRARRRDILVDEETLYAFYDERVPHDIVNGTGFEHWRKQAERQTPTLLHFDIEALKARDAADVTQAQYP 885          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A354XLW3_HALSX (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A354XLW3_HALSX)

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 492/548 (89.78%), Postives = 521/548 (95.07%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+LKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG+IE FPFVDPPD RFVKDGFRLLFELGAV+++Q+LS LGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCR+HYINY+RMREWHDTFRQLRQLLRDMDIEVPA          EQA+QARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+PQWIEPQAQHL+K SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+G FFTHNRALI+EVEALEDRARRRDILVDEETLFAFYDERIP +IVNGKGFEHWRKQAE++DP LL FD+D++KAR A D+TQ QYP
Sbjct:   91 RADLKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGNIEDFPFVDPPDGRFVKDGFRLLFELGAVNDKQQLSALGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCRDHYINYLRMREWHDTFRQLRQLLRDMDIEVPAXXXXXXXXXXEQAKQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPQWIEPQAQHLVKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGEFFTHNRALIEEVEALEDRARRRDILVDEETLFAFYDERIPTDIVNGKGFEHWRKQAERQDPTLLKFDIDALKARDAHDVTQAQYP 638          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A6H1Y616_9GAMM (ATP-dependent RNA helicase HrpA n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A6H1Y616_9GAMM)

HSP 1 Score: 981 bits (2537), Expect = 0.000e+0
Identity = 490/548 (89.42%), Postives = 519/548 (94.71%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+LKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPDSRFVKDGFRLLFELGAV+E+Q+LS LGRKLA+LPIDPRLARMVLAGAE G LRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGI+NAR+ LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP           EQA+QARRKTSGK+HQALLSGLLS+LGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+PQWIEPQA+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+G FF HNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPA++VNGKGFEHWRKQAE++DP LL FD+D++KAR A D+T  QYP
Sbjct:  337 RADLKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGSIEDFPFVDPPDSRFVKDGFRLLFELGAVNEKQQLSTLGRKLAKLPIDPRLARMVLAGAERGCLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIDNARDALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPXXXXXXXXXXXEQAKQARRKTSGKLHQALLSGLLSHLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPQWIEPQAEHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGAFFAHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPADVVNGKGFEHWRKQAERQDPELLKFDIDALKARDAHDVTLAQYP 884          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A0N8KIM2_9GAMM (RNA helicase HrpA n=15 Tax=Halomonas TaxID=2745 RepID=A0A0N8KIM2_9GAMM)

HSP 1 Score: 973 bits (2516), Expect = 0.000e+0
Identity = 482/548 (87.96%), Postives = 516/548 (94.16%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RAEL+  E+LPLYARLSN EQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE VSQASANQR GRCGRIAEG+CIRLY E+DFL+RP FTDPEIQRTNLASVILSML LKLGDIE FPFVDPPDSRFVKDGFRLLFELGAVDE+QRL+ LGRKLARLPIDPRLARMVLAG E GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGI+NARE LSGNQLRRWCR+HYINY+R+REWHDTFRQLRQLLRDMDIEVPAP P    ESEEQARQARRKTSG +H+ALL+GLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFEL+ETS+LFARTVA+I+PQWIEP A+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIV RRRVHYGPIAP ESRELFIRR LVEGEF T+G FF HNRALI+EVE+LEDRARRRDILVDE+TLFAFYDERIPA+IVNGKGFEHWR+QAEQ DP LL FD++++KAR A D+TQ QYP
Sbjct:  333 RAELRDCEVLPLYARLSNAEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPVSQASANQRMGRCGRIAEGVCIRLYDEDDFLARPAFTDPEIQRTNLASVILSMLALKLGDIEDFPFVDPPDSRFVKDGFRLLFELGAVDERQRLTSLGRKLARLPIDPRLARMVLAGNEQGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIDNAREALSGNQLRRWCRDHYINYLRVREWHDTFRQLRQLLRDMDIEVPAPKPAQADESEEQARQARRKTSGALHKALLTGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWLMAFELVETSRLFARTVARIDPQWIEPLAEHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVTRRRVHYGPIAPTESRELFIRRGLVEGEFHTKGAFFAHNRALIEEVESLEDRARRRDILVDEDTLFAFYDERIPADIVNGKGFEHWRRQAEQADPELLKFDIEALKARDAGDVTQAQYP 880          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A1U9RBC1_9GAMM (ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas TaxID=2745 RepID=A0A1U9RBC1_9GAMM)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 486/548 (88.69%), Postives = 515/548 (93.98%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+L GTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE +SQASANQRKGRCGR+AEG CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCR+HYINY+R+REWHDTFRQLRQLLRDMDIEV            EQARQARRKTSGK+HQALL+GLLSN+ TLLENREYLGARNRK MIHPGSGLAKK+PKW+MAFEL+ET+KLFARTVAKI+ QWIEPQA+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIV+RRRVHYGPIAP+ESRELFIRRALVEGEFQT+G FF HNRAL+DEVEALEDRARRRDILVDEETLFAFYDER+P +IVNGKGFEHWRKQAE++DP LL FD++S+KAR A+DITQ  YP
Sbjct:  348 RADLTGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPISQASANQRKGRCGRVAEGACIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGHIEDFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCRDHYINYLRVREWHDTFRQLRQLLRDMDIEVXXXXXXXXXXXXEQARQARRKTSGKLHQALLTGLLSNVATLLENREYLGARNRKLMIHPGSGLAKKTPKWLMAFELVETTKLFARTVAKIDSQWIEPQAEHLLKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVSRRRVHYGPIAPRESRELFIRRALVEGEFQTKGAFFAHNRALVDEVEALEDRARRRDILVDEETLFAFYDERLPEDIVNGKGFEHWRKQAERQDPGLLKFDIESLKARQAEDITQSHYP 895          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A7X4JYP0_9GAMM (ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas TaxID=2745 RepID=A0A7X4JYP0_9GAMM)

HSP 1 Score: 967 bits (2501), Expect = 0.000e+0
Identity = 481/548 (87.77%), Postives = 516/548 (94.16%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+LKGTEILPLYARLSN EQNRVFAPH+GRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG+IEAFPFVDPPDSRF+KDGFRLLFELGAV E QRL+PLGRKLARLPIDPRLARMVL GAE GSLR+VL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHG+ENARE LSGNQLRRWCREHYINY+R+REWHDTFRQLRQLLRDM+IEVPAP PRD  +SEEQARQARRKTSGK+HQALLSGLLS+LG L ENREYLGARNRKFMIHPGSGLAKK+PKW+MAFEL+ETS+LFARTVAKI+P WIEPQAQHL+KRSY++PHWEMKRAQVVA EQVTLFGLPIV  RRVHYGPIAP+ESRELFIRRALVEGEF+TRG FF HNRALI+EV  LEDRAR+RDILVDEETLFAFYDERIPA+IVNGKGFEHWRKQ E+ DP  L  DL+++KAR A ++T+ QYP
Sbjct:  332 RADLKGTEILPLYARLSNAEQNRVFAPHKGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPEFTDPEIQRTNLASVILSMLALKLGEIEAFPFVDPPDSRFIKDGFRLLFELGAVSEAQRLTPLGRKLARLPIDPRLARMVLEGAERGSLREVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGVENAREALSGNQLRRWCREHYINYLRVREWHDTFRQLRQLLRDMEIEVPAPLPRDPEQSEEQARQARRKTSGKLHQALLSGLLSHLGLLNENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELVETSRLFARTVAKIDPTWIEPQAQHLVKRSYADPHWEMKRAQVVAKEQVTLFGLPIVTGRRVHYGPIAPEESRELFIRRALVEGEFRTRGEFFAHNRALIEEVTDLEDRARKRDILVDEETLFAFYDERIPADIVNGKGFEHWRKQVEREDPEALKLDLETLKARDAGEVTKTQYP 879          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A3S8YQS8_9GAMM (ATP-dependent RNA helicase HrpA n=20 Tax=Halomonas TaxID=2745 RepID=A0A3S8YQS8_9GAMM)

HSP 1 Score: 967 bits (2499), Expect = 0.000e+0
Identity = 482/548 (87.96%), Postives = 513/548 (93.61%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+L GTEILPLYARLSNEEQNRVFA HRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E +SQASANQRKGRCGR+AEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IEAFPFVDPPD RF+KDGFRLLFELGAVD+QQRL+ LGRKLA+LPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLW+GIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDI             EEQA+QARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+P+WIEPQAQHLIK SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRR LVEGEFQT+G FF HNRALI+EVEALEDRARRRDILVDEETLFAFYDER+P +IVNGKGFEHWRKQ E+  P+LL FD++++KAR A+D+TQ QYP
Sbjct:  341 RADLTGTEILPLYARLSNEEQNRVFASHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPISQASANQRKGRCGRVAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGSIEAFPFVDPPDGRFIKDGFRLLFELGAVDDQQRLTTLGRKLAKLPIDPRLARMVLAGAERGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWYGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIXXXXXXXXXXXXXEEQAKQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPKWIEPQAQHLIKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRGLVEGEFQTKGEFFAHNRALIEEVEALEDRARRRDILVDEETLFAFYDERLPHDIVNGKGFEHWRKQVERESPDLLKFDIEALKARDANDVTQAQYP 888          
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: UPI001D0AEDDD (ATP-dependent RNA helicase HrpA n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0AEDDD)

HSP 1 Score: 957 bits (2474), Expect = 0.000e+0
Identity = 472/548 (86.13%), Postives = 512/548 (93.43%), Query Frame = 0
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 548
            RA+ KGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYV+DPGLVRISRYSYR+KIQRLPVE VSQASANQRKGRCGRIAEG+CIRL+ EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPD+RFVKDGFRLLFELGAVD Q+R+SPLGRKLARLPIDPRLARMVL GA   SLRDVLIVVSALA+QDPR+RPADKRQAADQAHQ+W DPDSDFVALLNLWHGIENAR  LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP PPP +E ESEE+ARQARRKTSGK+HQALLSGLLSN+G LLENREYLGARNRKF IHPGSGLAKK+PKW+MAFEL+ET+KL+ARTVA+I+P+WIEPQA HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRR+++GPI P  SRE+FIRRALVEGEF+TRG FF HNRALIDEVEALE+RARRRDIL DEETL+AFYD RIP +IVNG+GFEHWRKQAE   P LL FD++++KAR A+D+TQ QYP
Sbjct:  318 RADFKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVVDPGLVRISRYSYRAKIQRLPVEPVSQASANQRKGRCGRIAEGVCIRLFDEEDFLSRPAFTDPEIQRTNLASVILSMLSLKLGSIEDFPFVDPPDARFVKDGFRLLFELGAVDAQERISPLGRKLARLPIDPRLARMVLEGAARQSLRDVLIVVSALAVQDPRERPADKRQAADQAHQKWRDPDSDFVALLNLWHGIENARGALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPGPPPVNEDESEEEARQARRKTSGKLHQALLSGLLSNIGNLLENREYLGARNRKFFIHPGSGLAKKTPKWVMAFELVETTKLYARTVARIDPEWIEPQAMHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRINFGPIDPVTSREIFIRRALVEGEFRTRGAFFAHNRALIDEVEALEERARRRDILADEETLYAFYDARIPGDIVNGRGFEHWRKQAEGETPALLKFDIETLKARAAEDVTQAQYP 865          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A101D1K3_9GAMM0.000e+094.53ATP-dependent helicase HrpA n=40 Tax=root TaxID=1 ... [more]
A0A6M1SF63_HALSX0.000e+089.78ATP-dependent RNA helicase HrpA n=44 Tax=Halomonad... [more]
A0A433L7D8_9GAMM0.000e+089.96ATP-dependent RNA helicase HrpA n=13 Tax=Halomonas... [more]
A0A354XLW3_HALSX0.000e+089.78ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax... [more]
A0A6H1Y616_9GAMM0.000e+089.42ATP-dependent RNA helicase HrpA n=3 Tax=Halomonada... [more]
A0A0N8KIM2_9GAMM0.000e+087.96RNA helicase HrpA n=15 Tax=Halomonas TaxID=2745 Re... [more]
A0A1U9RBC1_9GAMM0.000e+088.69ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas ... [more]
A0A7X4JYP0_9GAMM0.000e+087.77ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas ... [more]
A0A3S8YQS8_9GAMM0.000e+087.96ATP-dependent RNA helicase HrpA n=20 Tax=Halomonas... [more]
UPI001D0AEDDD0.000e+086.13ATP-dependent RNA helicase HrpA n=1 Tax=Halomonas ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 1..93
e-value: 3.2E-9
score: 46.6
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 5..92
e-value: 7.3E-9
score: 36.0
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 1..133
score: 13.123
IPR007502Helicase-associated domainSMARTSM00847ha2_5coord: 153..243
e-value: 1.8E-35
score: 133.9
IPR007502Helicase-associated domainPFAMPF04408HA2coord: 156..238
e-value: 6.4E-17
score: 61.8
NoneNo IPR availableGENE3D1.20.120.1080coord: 137..235
e-value: 5.2E-18
score: 66.8
NoneNo IPR availableGENE3D3.40.50.300coord: 1..109
e-value: 5.5E-43
score: 148.5
NoneNo IPR availablePANTHERPTHR18934:SF99ATP-DEPENDENT RNA HELICASE DHX37-RELATEDcoord: 6..499
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 6..499
IPR011709Domain of unknown function DUF1605PFAMPF07717OB_NTP_bindcoord: 322..397
e-value: 2.9E-18
score: 66.0
IPR010222RNA helicase HrpATIGRFAMTIGR01967TIGR01967coord: 2..548
e-value: 3.1E-265
score: 881.1
IPR024590RNA helicase HrpA, C-terminalPFAMPF11898DUF3418coord: 411..548
e-value: 1.2E-60
score: 205.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..281

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12262contigE-siliculosus-1a_F_contig12262:2..1645 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12262.1428.1mRNA_E-siliculosus-1a_F_contig12262.1428.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig12262 2..1645 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig12262.1428.1 ID=prot_E-siliculosus-1a_F_contig12262.1428.1|Name=mRNA_E-siliculosus-1a_F_contig12262.1428.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=548bp
RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIR
YVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRL
YSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRF
VKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLR
DVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIE
NARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPP
PRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRK
FMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIK
RSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIR
RALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDE
RIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR024590HrpA_C
IPR010222RNA_helicase_HrpA
IPR011709DUF1605
IPR007502Helicase-assoc_dom
IPR001650Helicase_C