mRNA_E-siliculosus-1a_F_contig12262.1428.1 (mRNA) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E-siliculosus-1a_F_contig12262.1428.1
Unique NamemRNA_E-siliculosus-1a_F_contig12262.1428.1
TypemRNA
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Homology
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A101D1K3_9GAMM (ATP-dependent helicase HrpA n=40 Tax=root TaxID=1 RepID=A0A101D1K3_9GAMM)

HSP 1 Score: 1031 bits (2667), Expect = 0.000e+0
Identity = 518/548 (94.53%), Postives = 534/548 (97.45%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEG+CIRLYSEEDFL+RPGFTDPEIQRTNLASVILSMLGLKLGDIE FPFVDPPDSRFVKDGFRLLFELGAVDE+QRLSPLGRKL+RLPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLW+GIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDI+VPAPP R+E     QARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKW+MAFELIET+KLFARTVAKIEPQWIEPQAQHL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+GTFF HNRALIDEVEALEDRARRRDILVDEETLF+FYDERIPAEIVNGKGFEHWRKQAEQ+DP LLHFDLDS+KAR A D+TQ QYP
Sbjct:  338 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGVCIRLYSEEDFLARPGFTDPEIQRTNLASVILSMLGLKLGDIEDFPFVDPPDSRFVKDGFRLLFELGAVDEKQRLSPLGRKLSRLPIDPRLARMVLAGAEYGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWYGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIDVPAPPXRNEEXXXXQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWIMAFELIETTKLFARTVAKIEPQWIEPQAQHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGTFFAHNRALIDEVEALEDRARRRDILVDEETLFSFYDERIPAEIVNGKGFEHWRKQAEQQDPQLLHFDLDSLKARDAGDVTQAQYP 885
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A6M1SF63_HALSX (ATP-dependent RNA helicase HrpA n=44 Tax=Halomonadaceae TaxID=28256 RepID=A0A6M1SF63_HALSX)

HSP 1 Score: 992 bits (2564), Expect = 0.000e+0
Identity = 492/548 (89.78%), Postives = 522/548 (95.26%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+LKGT+ILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E +SQASANQRKGRCGR+AEG+CIRLY E+DFL+RP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPD RF+KDGFRLLFELGAVD++ +LSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPR+RPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP P PRDE    EQARQARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLA+KSPKW+MAFELIET+KLFARTVAKI+PQWIEPQAQHL+K SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRG FF HNRALI EVEALEDRARRRDILVDEE+LFAFYDERIPA+IVNGKGFEHWRKQAEQ+ P LL FDL+++KAR A D+TQ QYP
Sbjct:  343 RADLKGTDILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPISQASANQRKGRCGRVAEGVCIRLYDEDDFLARPAFTDPEIQRTNLASVILSMLALKLGHIEDFPFVDPPDGRFIKDGFRLLFELGAVDDKHQLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRERPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPPPLPRDEDXXXEQARQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLARKSPKWVMAFELIETTKLFARTVAKIDPQWIEPQAQHLVKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGAFFAHNRALIAEVEALEDRARRRDILVDEESLFAFYDERIPADIVNGKGFEHWRKQAEQQQPELLKFDLEALKARDAHDVTQAQYP 890
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A433L7D8_9GAMM (ATP-dependent RNA helicase HrpA n=13 Tax=Halomonas TaxID=2745 RepID=A0A433L7D8_9GAMM)

HSP 1 Score: 992 bits (2564), Expect = 0.000e+0
Identity = 493/548 (89.96%), Postives = 521/548 (95.07%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+LKGTEILPLYARLSNEEQNRVF  HRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGR+AEG+CIRLY EEDFLSRPGFTDPEIQRTNLASVILSML LKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDE  RLSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVPAP P+D+ +SE      RRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKW+MAFELIET+KL+ARTVAKI+PQWIEPQAQHL+KRSYSEPHWE KRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEF T+GTFF HNRALIDEVEALEDRARRRDILVDEETL+AFYDER+P +IVNG GFEHWRKQAE++ P LLHFD++++KAR A D+TQ QYP
Sbjct:  338 RADLKGTEILPLYARLSNEEQNRVFTAHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRVAEGVCIRLYDEEDFLSRPGFTDPEIQRTNLASVILSMLALKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEGYRLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPAPLPKDDEQSEXXXXXXRRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWVMAFELIETTKLYARTVAKIDPQWIEPQAQHLVKRSYSEPHWEQKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFTTQGTFFAHNRALIDEVEALEDRARRRDILVDEETLYAFYDERVPHDIVNGTGFEHWRKQAERQTPTLLHFDIEALKARDAADVTQAQYP 885
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A354XLW3_HALSX (ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax=Halomonas sp. TaxID=1486246 RepID=A0A354XLW3_HALSX)

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 492/548 (89.78%), Postives = 521/548 (95.07%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+LKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG+IE FPFVDPPD RFVKDGFRLLFELGAV+++Q+LS LGRKLA+LPIDPRLARMVLAGAE GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCR+HYINY+RMREWHDTFRQLRQLLRDMDIEVPA          EQA+QARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+PQWIEPQAQHL+K SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+G FFTHNRALI+EVEALEDRARRRDILVDEETLFAFYDERIP +IVNGKGFEHWRKQAE++DP LL FD+D++KAR A D+TQ QYP
Sbjct:   91 RADLKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGNIEDFPFVDPPDGRFVKDGFRLLFELGAVNDKQQLSALGRKLAKLPIDPRLARMVLAGAERGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCRDHYINYLRMREWHDTFRQLRQLLRDMDIEVPAXXXXXXXXXXEQAKQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPQWIEPQAQHLVKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGEFFTHNRALIEEVEALEDRARRRDILVDEETLFAFYDERIPTDIVNGKGFEHWRKQAERQDPTLLKFDIDALKARDAHDVTQAQYP 638
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A6H1Y616_9GAMM (ATP-dependent RNA helicase HrpA n=3 Tax=Halomonadaceae TaxID=28256 RepID=A0A6H1Y616_9GAMM)

HSP 1 Score: 981 bits (2537), Expect = 0.000e+0
Identity = 490/548 (89.42%), Postives = 519/548 (94.71%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+LKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPDSRFVKDGFRLLFELGAV+E+Q+LS LGRKLA+LPIDPRLARMVLAGAE G LRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGI+NAR+ LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP           EQA+QARRKTSGK+HQALLSGLLS+LGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+PQWIEPQA+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQT+G FF HNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPA++VNGKGFEHWRKQAE++DP LL FD+D++KAR A D+T  QYP
Sbjct:  337 RADLKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGSIEDFPFVDPPDSRFVKDGFRLLFELGAVNEKQQLSTLGRKLAKLPIDPRLARMVLAGAERGCLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIDNARDALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPXXXXXXXXXXXEQAKQARRKTSGKLHQALLSGLLSHLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPQWIEPQAEHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTKGAFFAHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPADVVNGKGFEHWRKQAERQDPELLKFDIDALKARDAHDVTLAQYP 884
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A0N8KIM2_9GAMM (RNA helicase HrpA n=15 Tax=Halomonas TaxID=2745 RepID=A0A0N8KIM2_9GAMM)

HSP 1 Score: 973 bits (2516), Expect = 0.000e+0
Identity = 482/548 (87.96%), Postives = 516/548 (94.16%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RAEL+  E+LPLYARLSN EQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE VSQASANQR GRCGRIAEG+CIRLY E+DFL+RP FTDPEIQRTNLASVILSML LKLGDIE FPFVDPPDSRFVKDGFRLLFELGAVDE+QRL+ LGRKLARLPIDPRLARMVLAG E GSLRDVL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGI+NARE LSGNQLRRWCR+HYINY+R+REWHDTFRQLRQLLRDMDIEVPAP P    ESEEQARQARRKTSG +H+ALL+GLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFEL+ETS+LFARTVA+I+PQWIEP A+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIV RRRVHYGPIAP ESRELFIRR LVEGEF T+G FF HNRALI+EVE+LEDRARRRDILVDE+TLFAFYDERIPA+IVNGKGFEHWR+QAEQ DP LL FD++++KAR A D+TQ QYP
Sbjct:  333 RAELRDCEVLPLYARLSNAEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPVSQASANQRMGRCGRIAEGVCIRLYDEDDFLARPAFTDPEIQRTNLASVILSMLALKLGDIEDFPFVDPPDSRFVKDGFRLLFELGAVDERQRLTSLGRKLARLPIDPRLARMVLAGNEQGSLRDVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIDNAREALSGNQLRRWCRDHYINYLRVREWHDTFRQLRQLLRDMDIEVPAPKPAQADESEEQARQARRKTSGALHKALLTGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWLMAFELVETSRLFARTVARIDPQWIEPLAEHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVTRRRVHYGPIAPTESRELFIRRGLVEGEFHTKGAFFAHNRALIEEVESLEDRARRRDILVDEDTLFAFYDERIPADIVNGKGFEHWRRQAEQADPELLKFDIEALKARDAGDVTQAQYP 880
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A1U9RBC1_9GAMM (ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas TaxID=2745 RepID=A0A1U9RBC1_9GAMM)

HSP 1 Score: 973 bits (2515), Expect = 0.000e+0
Identity = 486/548 (88.69%), Postives = 515/548 (93.98%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+L GTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE +SQASANQRKGRCGR+AEG CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLA+LPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARE LSGNQLRRWCR+HYINY+R+REWHDTFRQLRQLLRDMDIEV            EQARQARRKTSGK+HQALL+GLLSN+ TLLENREYLGARNRK MIHPGSGLAKK+PKW+MAFEL+ET+KLFARTVAKI+ QWIEPQA+HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIV+RRRVHYGPIAP+ESRELFIRRALVEGEFQT+G FF HNRAL+DEVEALEDRARRRDILVDEETLFAFYDER+P +IVNGKGFEHWRKQAE++DP LL FD++S+KAR A+DITQ  YP
Sbjct:  348 RADLTGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPISQASANQRKGRCGRVAEGACIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGHIEDFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLAKLPIDPRLARMVLAGAERGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENAREALSGNQLRRWCRDHYINYLRVREWHDTFRQLRQLLRDMDIEVXXXXXXXXXXXXEQARQARRKTSGKLHQALLTGLLSNVATLLENREYLGARNRKLMIHPGSGLAKKTPKWLMAFELVETTKLFARTVAKIDSQWIEPQAEHLLKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVSRRRVHYGPIAPRESRELFIRRALVEGEFQTKGAFFAHNRALVDEVEALEDRARRRDILVDEETLFAFYDERLPEDIVNGKGFEHWRKQAERQDPGLLKFDIESLKARQAEDITQSHYP 895
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A7X4JYP0_9GAMM (ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas TaxID=2745 RepID=A0A7X4JYP0_9GAMM)

HSP 1 Score: 967 bits (2501), Expect = 0.000e+0
Identity = 481/548 (87.77%), Postives = 516/548 (94.16%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+LKGTEILPLYARLSN EQNRVFAPH+GRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVE VSQASANQRKGRCGRIAEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG+IEAFPFVDPPDSRF+KDGFRLLFELGAV E QRL+PLGRKLARLPIDPRLARMVL GAE GSLR+VL+VVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHG+ENARE LSGNQLRRWCREHYINY+R+REWHDTFRQLRQLLRDM+IEVPAP PRD  +SEEQARQARRKTSGK+HQALLSGLLS+LG L ENREYLGARNRKFMIHPGSGLAKK+PKW+MAFEL+ETS+LFARTVAKI+P WIEPQAQHL+KRSY++PHWEMKRAQVVA EQVTLFGLPIV  RRVHYGPIAP+ESRELFIRRALVEGEF+TRG FF HNRALI+EV  LEDRAR+RDILVDEETLFAFYDERIPA+IVNGKGFEHWRKQ E+ DP  L  DL+++KAR A ++T+ QYP
Sbjct:  332 RADLKGTEILPLYARLSNAEQNRVFAPHKGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEPVSQASANQRKGRCGRIAEGVCIRLYDEEDFLSRPEFTDPEIQRTNLASVILSMLALKLGEIEAFPFVDPPDSRFIKDGFRLLFELGAVSEAQRLTPLGRKLARLPIDPRLARMVLEGAERGSLREVLVVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGVENAREALSGNQLRRWCREHYINYLRVREWHDTFRQLRQLLRDMEIEVPAPLPRDPEQSEEQARQARRKTSGKLHQALLSGLLSHLGLLNENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELVETSRLFARTVAKIDPTWIEPQAQHLVKRSYADPHWEMKRAQVVAKEQVTLFGLPIVTGRRVHYGPIAPEESRELFIRRALVEGEFRTRGEFFAHNRALIEEVTDLEDRARKRDILVDEETLFAFYDERIPADIVNGKGFEHWRKQVEREDPEALKLDLETLKARDAGEVTKTQYP 879
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: A0A3S8YQS8_9GAMM (ATP-dependent RNA helicase HrpA n=20 Tax=Halomonas TaxID=2745 RepID=A0A3S8YQS8_9GAMM)

HSP 1 Score: 967 bits (2499), Expect = 0.000e+0
Identity = 482/548 (87.96%), Postives = 513/548 (93.61%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+L GTEILPLYARLSNEEQNRVFA HRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYR+KIQRLP+E +SQASANQRKGRCGR+AEG+CIRLY EEDFLSRP FTDPEIQRTNLASVILSML LKLG IEAFPFVDPPD RF+KDGFRLLFELGAVD+QQRL+ LGRKLA+LPIDPRLARMVLAGAE GSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLW+GIENARE LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDI             EEQA+QARRKTSGK+HQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKK+PKW+MAFELIET+KLFARTVAKI+P+WIEPQAQHLIK SYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRR LVEGEFQT+G FF HNRALI+EVEALEDRARRRDILVDEETLFAFYDER+P +IVNGKGFEHWRKQ E+  P+LL FD++++KAR A+D+TQ QYP
Sbjct:  341 RADLTGTEILPLYARLSNEEQNRVFASHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRAKIQRLPIEPISQASANQRKGRCGRVAEGVCIRLYDEEDFLSRPAFTDPEIQRTNLASVILSMLALKLGSIEAFPFVDPPDGRFIKDGFRLLFELGAVDDQQRLTTLGRKLAKLPIDPRLARMVLAGAERGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWYGIENAREALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIXXXXXXXXXXXXXEEQAKQARRKTSGKLHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKTPKWVMAFELIETTKLFARTVAKIDPKWIEPQAQHLIKSSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRGLVEGEFQTKGEFFAHNRALIEEVEALEDRARRRDILVDEETLFAFYDERLPHDIVNGKGFEHWRKQVERESPDLLKFDIEALKARDANDVTQAQYP 888
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BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Match: UPI001D0AEDDD (ATP-dependent RNA helicase HrpA n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0AEDDD)

HSP 1 Score: 957 bits (2474), Expect = 0.000e+0
Identity = 472/548 (86.13%), Postives = 512/548 (93.43%), Query Frame = 1 
Query:    1 RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRLYSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRFVKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLRDVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIENARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPPPRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRKFMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIRRALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDERIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP 1644
            RA+ KGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYV+DPGLVRISRYSYR+KIQRLPVE VSQASANQRKGRCGRIAEG+CIRL+ EEDFLSRP FTDPEIQRTNLASVILSML LKLG IE FPFVDPPD+RFVKDGFRLLFELGAVD Q+R+SPLGRKLARLPIDPRLARMVL GA   SLRDVLIVVSALA+QDPR+RPADKRQAADQAHQ+W DPDSDFVALLNLWHGIENAR  LSGNQLRRWCREHYINY+RMREWHDTFRQLRQLLRDMDIEVP PPP +E ESEE+ARQARRKTSGK+HQALLSGLLSN+G LLENREYLGARNRKF IHPGSGLAKK+PKW+MAFEL+ET+KL+ARTVA+I+P+WIEPQA HL+KRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRR+++GPI P  SRE+FIRRALVEGEF+TRG FF HNRALIDEVEALE+RARRRDIL DEETL+AFYD RIP +IVNG+GFEHWRKQAE   P LL FD++++KAR A+D+TQ QYP
Sbjct:  318 RADFKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIRYVVDPGLVRISRYSYRAKIQRLPVEPVSQASANQRKGRCGRIAEGVCIRLFDEEDFLSRPAFTDPEIQRTNLASVILSMLSLKLGSIEDFPFVDPPDARFVKDGFRLLFELGAVDAQERISPLGRKLARLPIDPRLARMVLEGAARQSLRDVLIVVSALAVQDPRERPADKRQAADQAHQKWRDPDSDFVALLNLWHGIENARGALSGNQLRRWCREHYINYLRMREWHDTFRQLRQLLRDMDIEVPGPPPVNEDESEEEARQARRKTSGKLHQALLSGLLSNIGNLLENREYLGARNRKFFIHPGSGLAKKTPKWVMAFELVETTKLYARTVARIDPEWIEPQAMHLVKRSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRINFGPIDPVTSREIFIRRALVEGEFRTRGAFFAHNRALIDEVEALEERARRRDILADEETLYAFYDARIPGDIVNGRGFEHWRKQAEGETPALLKFDIETLKARAAEDVTQAQYP 865
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig12262.1428.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A101D1K3_9GAMM0.000e+094.53ATP-dependent helicase HrpA n=40 Tax=root TaxID=1 ... [more]
A0A6M1SF63_HALSX0.000e+089.78ATP-dependent RNA helicase HrpA n=44 Tax=Halomonad... [more]
A0A433L7D8_9GAMM0.000e+089.96ATP-dependent RNA helicase HrpA n=13 Tax=Halomonas... [more]
A0A354XLW3_HALSX0.000e+089.78ATP-dependent RNA helicase HrpA (Fragment) n=1 Tax... [more]
A0A6H1Y616_9GAMM0.000e+089.42ATP-dependent RNA helicase HrpA n=3 Tax=Halomonada... [more]
A0A0N8KIM2_9GAMM0.000e+087.96RNA helicase HrpA n=15 Tax=Halomonas TaxID=2745 Re... [more]
A0A1U9RBC1_9GAMM0.000e+088.69ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas ... [more]
A0A7X4JYP0_9GAMM0.000e+087.77ATP-dependent RNA helicase HrpA n=5 Tax=Halomonas ... [more]
A0A3S8YQS8_9GAMM0.000e+087.96ATP-dependent RNA helicase HrpA n=20 Tax=Halomonas... [more]
UPI001D0AEDDD0.000e+086.13ATP-dependent RNA helicase HrpA n=1 Tax=Halomonas ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig12262contigE-siliculosus-1a_F_contig12262:2..1645 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-19
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Properties
Property NameValue
Start0
Stop0
Cds size1644
Model size1644
Exons1
Hectar predicted targeting categoryother localisation
BRITEko00000,ko01000
Best eggNOG OGNA|NA|NA
Best tax levelOceanospirillales
COG Functional cat.L
EC3.6.4.13
EggNOG OGs1MUEQ@1224,1RMU1@1236,1XHUD@135619,COG1643@1,COG1643@2
EggNOG free text desc.Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain
GOsGO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360
KEGG koko:K03578
Preferred namehrpA
Seed eggNOG ortholog1415755.JQLV01000002_gene35
Seed ortholog evalue2.8e-304
Seed ortholog score1050.4
Taxonomic scopeBacteria
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927745.3336394-CDS-E-siliculosus-1a_F_contig12262:1..16451622927745.3336394-CDS-E-siliculosus-1a_F_contig12262:1..1645Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12262 2..1645 -
1696318664.3826003-CDS-E-siliculosus-1a_F_contig12262:1..16451696318664.3826003-CDS-E-siliculosus-1a_F_contig12262:1..1645Ectocarpus siliculosus Ec863f_EcPH12_90f femaleCDSE-siliculosus-1a_F_contig12262 2..1645 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig12262.1428.1prot_E-siliculosus-1a_F_contig12262.1428.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalepolypeptideE-siliculosus-1a_F_contig12262 2..1645 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E-siliculosus-1a_F_contig12262.1428.1

>prot_E-siliculosus-1a_F_contig12262.1428.1 ID=prot_E-siliculosus-1a_F_contig12262.1428.1|Name=mRNA_E-siliculosus-1a_F_contig12262.1428.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=548bp
RAELKGTEILPLYARLSNEEQNRVFAPHRGRRIVLATNVAETSLTVPGIR
YVIDPGLVRISRYSYRSKIQRLPVEAVSQASANQRKGRCGRIAEGICIRL
YSEEDFLSRPGFTDPEIQRTNLASVILSMLGLKLGDIEAFPFVDPPDSRF
VKDGFRLLFELGAVDEQQRLSPLGRKLARLPIDPRLARMVLAGAELGSLR
DVLIVVSALAIQDPRDRPADKRQAADQAHQRWHDPDSDFVALLNLWHGIE
NARETLSGNQLRRWCREHYINYIRMREWHDTFRQLRQLLRDMDIEVPAPP
PRDEGESEEQARQARRKTSGKVHQALLSGLLSNLGTLLENREYLGARNRK
FMIHPGSGLAKKSPKWMMAFELIETSKLFARTVAKIEPQWIEPQAQHLIK
RSYSEPHWEMKRAQVVAFEQVTLFGLPIVARRRVHYGPIAPQESRELFIR
RALVEGEFQTRGTFFTHNRALIDEVEALEDRARRRDILVDEETLFAFYDE
RIPAEIVNGKGFEHWRKQAEQRDPNLLHFDLDSIKARGADDITQIQYP
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mRNA from alignment at E-siliculosus-1a_F_contig12262:2..1645-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E-siliculosus-1a_F_contig12262.1428.1 ID=mRNA_E-siliculosus-1a_F_contig12262.1428.1|Name=mRNA_E-siliculosus-1a_F_contig12262.1428.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=mRNA|length=1644bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12262:2..1645- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGTGCTGAACTGAAAGGCACCGAAATCCTGCCTCTTTACGCCCGTCTTTC
TAACGAAGAACAGAACCGCGTATTTGCGCCACACCGCGGACGGCGCATTG
TGCTTGCCACCAATGTCGCGGAAACCTCGCTAACGGTGCCCGGTATTCGC
TATGTCATAGACCCTGGGCTGGTGCGTATCAGTCGCTATAGCTACCGGTC
TAAAATTCAGCGCCTGCCGGTAGAGGCAGTTAGCCAGGCGAGCGCCAACC
AGCGTAAAGGGCGCTGTGGCCGAATTGCTGAAGGAATATGTATTCGCCTC
TACAGCGAAGAAGATTTTTTATCTCGGCCCGGTTTTACTGATCCTGAAAT
CCAGCGCACCAATCTAGCGTCGGTAATTCTTTCGATGCTGGGACTCAAGC
TCGGTGATATTGAAGCTTTTCCGTTTGTCGATCCCCCGGATAGCCGTTTT
GTTAAAGACGGCTTTCGACTGCTATTTGAGTTAGGGGCGGTTGATGAGCA
ACAGCGACTCTCTCCGCTTGGACGGAAATTGGCGCGTCTGCCTATTGACC
CTCGCTTAGCGCGCATGGTGTTAGCGGGAGCTGAGCTTGGCAGCCTGCGT
GATGTGCTGATTGTGGTATCCGCGCTGGCTATTCAGGATCCCCGCGACCG
CCCGGCGGATAAACGTCAGGCGGCCGATCAGGCCCACCAGCGGTGGCATG
ACCCAGACTCGGACTTTGTCGCGTTGTTAAACCTCTGGCACGGCATTGAA
AATGCCCGTGAGACGTTATCGGGTAACCAGCTGCGGCGCTGGTGTCGTGA
GCATTACATCAATTATATACGTATGCGTGAGTGGCACGATACATTTCGCC
AACTCCGCCAACTGTTGCGCGATATGGATATCGAAGTGCCCGCACCGCCG
CCCCGTGATGAAGGCGAGAGCGAAGAGCAGGCGCGCCAAGCGCGGCGTAA
AACCTCGGGGAAAGTCCACCAGGCGTTGCTCTCTGGGTTGCTTTCCAACC
TGGGCACGCTGCTTGAAAACCGAGAGTATCTTGGTGCTCGCAATCGTAAA
TTTATGATTCACCCTGGCTCGGGGTTGGCTAAAAAATCACCCAAATGGAT
GATGGCGTTTGAGCTAATCGAAACCTCTAAGCTATTTGCCCGCACTGTTG
CCAAGATCGAACCTCAATGGATTGAACCCCAAGCTCAGCATTTAATTAAA
CGCAGCTACAGCGAACCGCATTGGGAAATGAAGCGGGCGCAGGTGGTCGC
GTTTGAACAGGTAACGCTATTTGGACTGCCGATCGTGGCCCGCCGCCGGG
TTCATTATGGTCCGATCGCTCCTCAGGAATCCCGGGAGCTGTTTATTCGC
CGTGCATTGGTAGAGGGCGAGTTTCAAACCAGAGGCACCTTTTTCACTCA
CAATCGTGCGCTGATTGACGAAGTAGAAGCGCTGGAGGATCGCGCTCGAC
GGCGGGATATTTTGGTCGATGAAGAGACGCTCTTCGCTTTTTACGATGAA
CGGATCCCAGCGGAGATCGTTAACGGCAAGGGATTTGAGCACTGGCGCAA
ACAGGCAGAGCAGCGCGATCCCAACCTGCTGCATTTTGATCTCGATTCAA
TTAAGGCGCGTGGCGCTGATGACATCACTCAAATACAGTACCCT
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Coding sequence (CDS) from alignment at E-siliculosus-1a_F_contig12262:2..1645-

>mRNA_E-siliculosus-1a_F_contig12262.1428.1 ID=mRNA_E-siliculosus-1a_F_contig12262.1428.1|Name=mRNA_E-siliculosus-1a_F_contig12262.1428.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=CDS|length=3288bp|location=Sequence derived from alignment at E-siliculosus-1a_F_contig12262:2..1645- (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
CGTGCTGAACTGAAAGGCACCGAAATCCTGCCTCTTTACGCCCGTCTTTC
TAACGAAGAACAGAACCGCGTATTTGCGCCACACCGCGGACGGCGCATTG
TGCTTGCCACCAATGTCGCGGAAACCTCGCTAACGGTGCCCGGTATTCGC
TATGTCATAGACCCTGGGCTGGTGCGTATCAGTCGCTATAGCTACCGGTC
TAAAATTCAGCGCCTGCCGGTAGAGGCAGTTAGCCAGGCGAGCGCCAACC
AGCGTAAAGGGCGCTGTGGCCGAATTGCTGAAGGAATATGTATTCGCCTC
TACAGCGAAGAAGATTTTTTATCTCGGCCCGGTTTTACTGATCCTGAAAT
CCAGCGCACCAATCTAGCGTCGGTAATTCTTTCGATGCTGGGACTCAAGC
TCGGTGATATTGAAGCTTTTCCGTTTGTCGATCCCCCGGATAGCCGTTTT
GTTAAAGACGGCTTTCGACTGCTATTTGAGTTAGGGGCGGTTGATGAGCA
ACAGCGACTCTCTCCGCTTGGACGGAAATTGGCGCGTCTGCCTATTGACC
CTCGCTTAGCGCGCATGGTGTTAGCGGGAGCTGAGCTTGGCAGCCTGCGT
GATGTGCTGATTGTGGTATCCGCGCTGGCTATTCAGGATCCCCGCGACCG
CCCGGCGGATAAACGTCAGGCGGCCGATCAGGCCCACCAGCGGTGGCATG
ACCCAGACTCGGACTTTGTCGCGTTGTTAAACCTCTGGCACGGCATTGAA
AATGCCCGTGAGACGTTATCGGGTAACCAGCTGCGGCGCTGGTGTCGTGA
GCATTACATCAATTATATACGTATGCGTGAGTGGCACGATACATTTCGCC
AACTCCGCCAACTGTTGCGCGATATGGATATCGAAGTGCCCGCACCGCCG
CCCCGTGATGAAGGCGAGAGCGAAGAGCAGGCGCGCCAAGCGCGGCGTAA
AACCTCGGGGAAAGTCCACCAGGCGTTGCTCTCTGGGTTGCTTTCCAACC
TGGGCACGCTGCTTGAAAACCGAGAGTATCTTGGTGCTCGCAATCGTAAA
TTTATGATTCACCCTGGCTCGGGGTTGGCTAAAAAATCACCCAAATGGAT
GATGGCGTTTGAGCTAATCGAAACCTCTAAGCTATTTGCCCGCACTGTTG
CCAAGATCGAACCTCAATGGATTGAACCCCAAGCTCAGCATTTAATTAAA
CGCAGCTACAGCGAACCGCATTGGGAAATGAAGCGGGCGCAGGTGGTCGC
GTTTGAACAGGTAACGCTATTTGGACTGCCGATCGTGGCCCGCCGCCGGG
TTCATTATGGTCCGATCGCTCCTCAGGAATCCCGGGAGCTGTTTATTCGC
CGTGCATTGGTAGAGGGCGAGTTTCAAACCAGAGGCACCTTTTTCACTCA
CAATCGTGCGCTGATTGACGAAGTAGAAGCGCTGGAGGATCGCGCTCGAC
GGCGGGATATTTTGGTCGATGAAGAGACGCTCTTCGCTTTTTACGATGAA
CGGATCCCAGCGGAGATCGTTAACGGCAAGGGATTTGAGCACTGGCGCAA
ACAGGCAGAGCAGCGCGATCCCAACCTGCTGCATTTTGATCTCGATTCAA
TTAAGGCGCGTGGCGCTGATGACATCACTCAAATACAGTACCCTCGTGCT
GAACTGAAAGGCACCGAAATCCTGCCTCTTTACGCCCGTCTTTCTAACGA
AGAACAGAACCGCGTATTTGCGCCACACCGCGGACGGCGCATTGTGCTTG
CCACCAATGTCGCGGAAACCTCGCTAACGGTGCCCGGTATTCGCTATGTC
ATAGACCCTGGGCTGGTGCGTATCAGTCGCTATAGCTACCGGTCTAAAAT
TCAGCGCCTGCCGGTAGAGGCAGTTAGCCAGGCGAGCGCCAACCAGCGTA
AAGGGCGCTGTGGCCGAATTGCTGAAGGAATATGTATTCGCCTCTACAGC
GAAGAAGATTTTTTATCTCGGCCCGGTTTTACTGATCCTGAAATCCAGCG
CACCAATCTAGCGTCGGTAATTCTTTCGATGCTGGGACTCAAGCTCGGTG
ATATTGAAGCTTTTCCGTTTGTCGATCCCCCGGATAGCCGTTTTGTTAAA
GACGGCTTTCGACTGCTATTTGAGTTAGGGGCGGTTGATGAGCAACAGCG
ACTCTCTCCGCTTGGACGGAAATTGGCGCGTCTGCCTATTGACCCTCGCT
TAGCGCGCATGGTGTTAGCGGGAGCTGAGCTTGGCAGCCTGCGTGATGTG
CTGATTGTGGTATCCGCGCTGGCTATTCAGGATCCCCGCGACCGCCCGGC
GGATAAACGTCAGGCGGCCGATCAGGCCCACCAGCGGTGGCATGACCCAG
ACTCGGACTTTGTCGCGTTGTTAAACCTCTGGCACGGCATTGAAAATGCC
CGTGAGACGTTATCGGGTAACCAGCTGCGGCGCTGGTGTCGTGAGCATTA
CATCAATTATATACGTATGCGTGAGTGGCACGATACATTTCGCCAACTCC
GCCAACTGTTGCGCGATATGGATATCGAAGTGCCCGCACCGCCGCCCCGT
GATGAAGGCGAGAGCGAAGAGCAGGCGCGCCAAGCGCGGCGTAAAACCTC
GGGGAAAGTCCACCAGGCGTTGCTCTCTGGGTTGCTTTCCAACCTGGGCA
CGCTGCTTGAAAACCGAGAGTATCTTGGTGCTCGCAATCGTAAATTTATG
ATTCACCCTGGCTCGGGGTTGGCTAAAAAATCACCCAAATGGATGATGGC
GTTTGAGCTAATCGAAACCTCTAAGCTATTTGCCCGCACTGTTGCCAAGA
TCGAACCTCAATGGATTGAACCCCAAGCTCAGCATTTAATTAAACGCAGC
TACAGCGAACCGCATTGGGAAATGAAGCGGGCGCAGGTGGTCGCGTTTGA
ACAGGTAACGCTATTTGGACTGCCGATCGTGGCCCGCCGCCGGGTTCATT
ATGGTCCGATCGCTCCTCAGGAATCCCGGGAGCTGTTTATTCGCCGTGCA
TTGGTAGAGGGCGAGTTTCAAACCAGAGGCACCTTTTTCACTCACAATCG
TGCGCTGATTGACGAAGTAGAAGCGCTGGAGGATCGCGCTCGACGGCGGG
ATATTTTGGTCGATGAAGAGACGCTCTTCGCTTTTTACGATGAACGGATC
CCAGCGGAGATCGTTAACGGCAAGGGATTTGAGCACTGGCGCAAACAGGC
AGAGCAGCGCGATCCCAACCTGCTGCATTTTGATCTCGATTCAATTAAGG
CGCGTGGCGCTGATGACATCACTCAAATACAGTACCCT
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