prot_E-siliculosus-1a_F_contig1224.1410.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1224.1410.1
Unique Nameprot_E-siliculosus-1a_F_contig1224.1410.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length447
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1224.1410.1 vs. uniprot
Match: D7FTM1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM1_ECTSI)

HSP 1 Score: 541 bits (1394), Expect = 1.260e-179
Identity = 408/449 (90.87%), Postives = 413/449 (91.98%), Query Frame = 0
Query:    1 HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATLGKSQGGKGLSSTSGGMIAAGGSKGPKGKGRGLWEETTSNXXXXXXXXXXXXARLGDELPGSSPWSGSGGERPASSATSRASRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RVDGRRADKVAAAPGGGRGAVTGHNVVGGAERPSRVVPRLQLRRAESRLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-RPPSTHRLDGSGISRGGNPSGEVATAVAGNGDDPFATGLMPFRYAGATSSTDGPASFRSFSGASLRCRAVALADSRPQGASGRIVDSVASVSNGGAPPSDAEPARGGGARESTKAGALATREELFPGAAAASGRGLSVADCVRP 446
            HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATL KSQGGKGLSST  G+IA GGSKGPKGKGRGLWEET SN            ARLGDELPGSSPWSGSGGERPASSATSRASRPS  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RVDGRRADKVAAAPGGGRGAV GHNVVGGAERPSRVVPRLQLRRAESRLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RPPSTHRLDGSG         EVATAVAGNGDDPFATGL+ FRYAGATSSTDGPASFRSFSGASLRCRAV+LADSR QGASGRIVDS+ASV+NGGAPPSDAEPARGGGAREST AGAL TREELFPGAAAASGRGLSVADCVRP
Sbjct:  696 HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATLAKSQGGKGLSSTGSGVIAGGGSKGPKGKGRGLWEETNSNATTVVATRGGGVARLGDELPGSSPWSGSGGERPASSATSRASRPSAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDGRRADKVAAAPGGGRGAVAGHNVVGGAERPSRVVPRLQLRRAESRLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSTHRLDGSGTK-------EVATAVAGNGDDPFATGLVSFRYAGATSSTDGPASFRSFSGASLRCRAVSLADSRQQGASGRIVDSMASVTNGGAPPSDAEPARGGGARESTNAGALTTREELFPGAAAASGRGLSVADCVRP 1137          
BLAST of mRNA_E-siliculosus-1a_F_contig1224.1410.1 vs. uniprot
Match: A0A6H5K6N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6N2_9PHAE)

HSP 1 Score: 456 bits (1172), Expect = 5.030e-152
Identity = 402/578 (69.55%), Postives = 407/578 (70.42%), Query Frame = 0
Query:    1 HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATLGKSQGGKGLSSTSGGMIAAGGSKGPKGKGRGLWEETTSNXXXXXXXXXXXXARLGDELPGSSPWSGSGGERPASSATSRASRPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVDGRRADKVAAAPGGGRGAVTGHNVVGGAERPSRVVPRLQLRRAESRLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPPSTHRLDGSGISRGGNPSG------------------------------------------------------------------------------------------------------------------------------------EVATAVAGNGDDPFATGLMPFRYAGATSSTDGPASFRSFSGASLRCRAVALADSRPQGASGRIVDSVASVSNGGAPPSDAEPARGGGARESTKAGALATREELFPGAAAASGRGLSVADCVRP 446
            HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATLGKSQGGK LSSTSGGMIA GGSKGPKGKGRGLWEETTSNXXXXXXXXXXXXARLGDELPG+SPWSGSGGERPASSATSRASRPS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   XXX XXXXXXXXXX    R             GAV GHNVVGGAERPSRVVPRLQLRRAE+RLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    THRLDGSG SRGGNPS                                                                                                                                     EVATAV+GNGDDPFATGLMPFRYAGAT STDGPASFRSFSGASLRC AVALAD R QGAS RIVDS+ASVSNGGAPPSDAEPARGGGARESTKA ALATREELF GAAAASGRG +VADCVRP
Sbjct:  101 HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQDIGLIAERLATLGKSQGGKALSSTSGGMIAGGGSKGPKGKGRGLWEETTSNXXXXXXXXXXXXARLGDELPGASPWSGSGGERPASSATSRASRPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHRXXXGXXXXXXXXXXXXXXR-------------GAVAGHNVVGGAERPSRVVPRLQLRRAETRLALAPSLLTLRTPVVLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHRLDGSGNSRGGNPSDSGGGSGAPPSVVSLEVKPLGFTSALSTGEKWGPQVAAFPAPLLCLPGAAEVVKKTNATPRRRSLQQHQDHEQVFAKSNSRVPALPDGCGGXXXXXXATAVSPRGVRQAVTGRNSNDQICFPRPPCRAAGRAEEVATAVSGNGDDPFATGLMPFRYAGATLSTDGPASFRSFSGASLRCHAVALADWRQQGASSRIVDSMASVSNGGAPPSDAEPARGGGARESTKAEALATREELFLGAAAASGRGRNVADCVRP 665          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1224.1410.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTM1_ECTSI1.260e-17990.87Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K6N2_9PHAE5.030e-15269.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1224contigE-siliculosus-1a_F_contig1224:2190..3929 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1224.1410.1mRNA_E-siliculosus-1a_F_contig1224.1410.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1224 2190..3929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1224.1410.1 ID=prot_E-siliculosus-1a_F_contig1224.1410.1|Name=mRNA_E-siliculosus-1a_F_contig1224.1410.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=447bp
HRAGHFRVLYPTAENVTRLWPIFRSPRFLNGVLARWVLTGGLTNPTNRQD
IGLIAERLATLGKSQGGKGLSSTSGGMIAAGGSKGPKGKGRGLWEETTSN
ATTVVTTRGGGGARLGDELPGSSPWSGSGGERPASSATSRASRPSAARRP
PCRASAAAVPSTAATAKVAAAAAGGVTQQQMHRQQHGSSQHLSSEGRGGG
GRVDGRRADKVAAAPGGGRGAVTGHNVVGGAERPSRVVPRLQLRRAESRL
ALAPSLLTLRTPVVLSSSRRGGGAAALSGSGSREGGSDAAPRRRRASSAS
SSRPPSTHRLDGSGISRGGNPSGEVATAVAGNGDDPFATGLMPFRYAGAT
SSTDGPASFRSFSGASLRCRAVALADSRPQGASGRIVDSVASVSNGGAPP
SDAEPARGGGARESTKAGALATREELFPGAAAASGRGLSVADCVRP*
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