prot_E-siliculosus-1a_F_contig1218.1379.1 (polypeptide) Ectocarpus siliculosus Ec863f_EcPH12_90f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E-siliculosus-1a_F_contig1218.1379.1
Unique Nameprot_E-siliculosus-1a_F_contig1218.1379.1
Typepolypeptide
OrganismEctocarpus siliculosus Ec863f_EcPH12_90f female (Ectocarpus siliculosus Ec863f_EcPH12_90f female)
Sequence length339
Homology
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1379.1 vs. uniprot
Match: D8LD61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD61_ECTSI)

HSP 1 Score: 632 bits (1631), Expect = 6.860e-216
Identity = 328/339 (96.76%), Postives = 332/339 (97.94%), Query Frame = 0
Query:    1 MASQERGRREQPSRSHGKKMPAYRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVATFVRVHVEGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDACVTGFIKARDETSISRARLLCLQVRQNLEIIRMELGWSRLELGLLFGGFCAGGMQSANALEELSEVMEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLRDVSRAVDVTLEATSRRSALLPASILACCHR 339
            MA+Q   RREQ SRSHGKKMPAYRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVATFVRVH+EGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDA VTGFIK RDETSISRARLLCLQVRQNLEIIRMELGWSRLELGLLFGGFCAGGMQSANALEELSE+MEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLR VS+AVDVTLEATSRRSALLPASILACCHR
Sbjct:    1 MANQGHDRREQTSRSHGKKMPAYRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVATFVRVHIEGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDARVTGFIKGRDETSISRARLLCLQVRQNLEIIRMELGWSRLELGLLFGGFCAGGMQSANALEELSELMEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLRGVSKAVDVTLEATSRRSALLPASILACCHR 339          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1379.1 vs. uniprot
Match: A0A6H5JZ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ72_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 2.850e-50
Identity = 96/101 (95.05%), Postives = 99/101 (98.02%), Query Frame = 0
Query:  239 RMELGWSRLELGLLFGGFCAGGMQSANALEELSEVMEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLRDVSRAVDVTLEATSRRSALLPASILACCHR 339
            RMELGWSRLELGLLFGGFCAGGMQSANALEELSE+MEQVLQGVRGM QSMVDMHRTRAQ SFSRVVGSSLRDVS+AVD+TLEATSRRSALLPASILACCHR
Sbjct:    4 RMELGWSRLELGLLFGGFCAGGMQSANALEELSELMEQVLQGVRGMLQSMVDMHRTRAQVSFSRVVGSSLRDVSKAVDLTLEATSRRSALLPASILACCHR 104          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1379.1 vs. uniprot
Match: A0A836CDY4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY4_9STRA)

HSP 1 Score: 160 bits (404), Expect = 6.750e-40
Identity = 107/296 (36.15%), Postives = 157/296 (53.04%), Query Frame = 0
Query:   21 PAYRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVA-TFVRVHVEGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDACVTGFIKARDETSISRARLLCLQVRQNLEIIRMELGWSRLELGLLFGGFCAGGMQSANALEELSEVMEQVLQGVRGMRQSMVDMHRTRAQASFSRVVGSSLRDVSRAV 315
            P Y   S+FR  +EA  RT L+  +  +W+ F      + F   + AIV    +AG T+   L + HG  + A  A++   + +   +  G   F   FL+LR RRL  LG++ GC     L+   +S   L +  W S    ++R  VEGG+ +L+ASLLPYPRLA REGALR+Q+MC+ L     ACV GF+  RDE  ISRA LL  Q+R N   I+   G   +EL +LF G  AGG+     +  +S+ M   ++ V GMRQ+++ +     Q+ F   +   L+D   A+
Sbjct:   43 PVYVAESEFRRGLEASFRTALATLISLVWITFRADPHPVIFINTILAIVTTLDTAGATLVAQLSVLHGVSLAAALAVITELVARNSAWGTGMCIFIGNFLILRRRRLDVLGRRLGCA---TLLAAALSFRTLGVDGWSSYLWAWLRGIVEGGICSLLASLLPYPRLAIREGALRSQYMCYLLQRGTSACVDGFLAGRDERMISRAGLLAEQMRLNCARIKGLHGACYMELNVLFWGQ-AGGLAPVELMGLVSQNMAPRVECVEGMRQALIALEHDAEQSGFIEHLWPHLQDTKHAL 334          
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1379.1 vs. uniprot
Match: A0A836CQ15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQ15_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.450e-31
Identity = 87/213 (40.85%), Postives = 120/213 (56.34%), Query Frame = 0
Query:   23 YRPPSDFRVNVEAGLRTTLSLGLVFLWLGFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPRWLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDDGLTLSWWGSVATFVRVHVEGGVTALVASLLPYPRLATREGALRAQFMCHSLSSAVDACVTGFIKARDETSISRARLLCLQVRQNL 235
            ++  S+FR ++EA LRT L+      W   GP    L+FF+ V AIV    +AG TI+ SL   HGAL GA  A L R +     + AG   F   FL++R RRL SLG+K  CV + + VL    +D    +W  S+ ++ +   EGGV A +A ++PYPRLA REGALRAQ+ C  +  A+ +CV GF   R    ++   LL  Q+R NL
Sbjct:   10 FKAESEFRRSLEAALRTGLAAAASIAWAEVGPIRNPLNFFSPVVAIVVTLDTAGGTIAASLGCLHGALSGAFFAFLIRLIADQNCWVAGLLMFIGFFLIVRRRRLNSLGRKIACVTLIVAVLTFERED--VTAWIMSMLSWYKSVFEGGVWATLALMVPYPRLALREGALRAQYTCKLMQRAMVSCVEGFKMGR--RVLTDMDLLIEQMRLNL 218          
The following BLAST results are available for this feature:
BLAST of mRNA_E-siliculosus-1a_F_contig1218.1379.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LD61_ECTSI6.860e-21696.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JZ72_9PHAE2.850e-5095.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CDY4_9STRA6.750e-4036.15Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQ15_9STRA1.450e-3140.85Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..339
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 108..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 103..107
NoneNo IPR availableTMHMMTMhelixcoord: 105..122
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 79..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E-siliculosus-1a_F_contig1218contigE-siliculosus-1a_F_contig1218:270..7467 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus siliculosus 1a female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus siliculosus 1a female vs UniRef902022-09-16
OGS1.0 of Ectocarpus siliculosus Ec863f_EcPH12_90f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E-siliculosus-1a_F_contig1218.1379.1mRNA_E-siliculosus-1a_F_contig1218.1379.1Ectocarpus siliculosus Ec863f_EcPH12_90f femalemRNAE-siliculosus-1a_F_contig1218 270..7538 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E-siliculosus-1a_F_contig1218.1379.1 ID=prot_E-siliculosus-1a_F_contig1218.1379.1|Name=mRNA_E-siliculosus-1a_F_contig1218.1379.1|organism=Ectocarpus siliculosus Ec863f_EcPH12_90f female|type=polypeptide|length=339bp
MASQERGRREQPSRSHGKKMPAYRPPSDFRVNVEAGLRTTLSLGLVFLWL
GFGPFGGGLSFFAGVTAIVCVGGSAGQTISRSLMMTHGALVGAICAILPR
WLMQWGRFPAGAGFFAAVFLVLRSRRLTSLGKKFGCVGVTLLVLGKMSDD
GLTLSWWGSVATFVRVHVEGGVTALVASLLPYPRLATREGALRAQFMCHS
LSSAVDACVTGFIKARDETSISRARLLCLQVRQNLEIIRMELGWSRLELG
LLFGGFCAGGMQSANALEELSEVMEQVLQGVRGMRQSMVDMHRTRAQASF
SRVVGSSLRDVSRAVDVTLEATSRRSALLPASILACCHR
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